RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 TAS2R1Q9NYW7 299 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 CLCF1Q9UBD9 225 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 ABCD2Q9UBJ2 740 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 ZNF629Q9UEG4 869 aaPredicted RBP2.41□□□□□ -2.02
SKP1-204ENST00000517691 PLEKHB1Q9UF11 243 aaPredicted RBP2.41□□□□□ -2.02
SKP1-204ENST00000517691 TESQ9UGI8 421 aaKnown RBP2.41□□□□□ -2.02
SKP1-204ENST00000517691 RIMS3Q9UJD0 308 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 SAMD4AQ9UPU9 718 aaKnown RBP2.41□□□□□ -2.02
SKP1-204ENST00000517691 TRAPPC4Q9Y296 219 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 HDGFL3Q9Y3E1 203 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 ZNF175Q9Y473 711 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 A3GALT2U3KPV4 340 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 FASNP49327 2511 aaKnown RBP2.4□□□□□ -2.03
SKP1-204ENST00000517691 COL12A1Q99715 3063 aa2.4□□□□□ -2.03
SKP1-204ENST00000517691 TRAV36DV7A0A075B6V5 113 aa2.4□□□□□ -2.03
SKP1-204ENST00000517691 A0A087WUJ7 227 aa2.4□□□□□ -2.03
SKP1-204ENST00000517691 A0A0B4J2E0 115 aa2.4□□□□□ -2.03
SKP1-204ENST00000517691 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP2.4□□□□□ -2.03
SKP1-204ENST00000517691 A0A1B0GX12 115 aa2.4□□□□□ -2.03
SKP1-204ENST00000517691 A0A1W2PNV4 684 aa2.4□□□□□ -2.03
SKP1-204ENST00000517691 CLEC18AA5D8T8 446 aa2.4□□□□□ -2.03
SKP1-204ENST00000517691 DIRC3C9JPN6 131 aa2.4□□□□□ -2.03
SKP1-204ENST00000517691 hCG_2039718K7EN88 272 aa2.4□□□□□ -2.03
SKP1-204ENST00000517691 ARPC2O15144 300 aa2.4□□□□□ -2.03
SKP1-204ENST00000517691 OR2T1O43869 369 aa2.4□□□□□ -2.03
SKP1-204ENST00000517691 SSX4O60224 188 aa2.4□□□□□ -2.03
SKP1-204ENST00000517691 KRT33AO76009 404 aa2.4□□□□□ -2.03
SKP1-204ENST00000517691 PMS2P2O95744 297 aa2.4□□□□□ -2.03
SKP1-204ENST00000517691 CRHP06850 196 aa2.4□□□□□ -2.03
SKP1-204ENST00000517691 SMIM18P0DKX4 95 aa2.4□□□□□ -2.03
SKP1-204ENST00000517691 HSD17B1P14061 328 aa2.4□□□□□ -2.03
SKP1-204ENST00000517691 COX6B1P14854 86 aa2.4□□□□□ -2.03
SKP1-204ENST00000517691 NQO1P15559 274 aaKnown RBP2.4□□□□□ -2.03
SKP1-204ENST00000517691 KLK2P20151 261 aa2.4□□□□□ -2.03
SKP1-204ENST00000517691 CD80P33681 288 aa2.4□□□□□ -2.03
SKP1-204ENST00000517691 HERV-K104P63124 156 aa2.4□□□□□ -2.03
SKP1-204ENST00000517691 ST3GAL3Q11203 375 aa2.4□□□□□ -2.03
SKP1-204ENST00000517691 PMS2P3Q13401 168 aa2.4□□□□□ -2.03
SKP1-204ENST00000517691 UBE2V1Q13404 147 aa2.4□□□□□ -2.03
SKP1-204ENST00000517691 C1DQ13901 141 aaKnown RBP2.4□□□□□ -2.03
SKP1-204ENST00000517691 ACKR1Q16570 336 aa2.4□□□□□ -2.03
SKP1-204ENST00000517691 SLC25A35Q3KQZ1 300 aa2.4□□□□□ -2.03
SKP1-204ENST00000517691 DNAL1Q4LDG9 190 aa2.4□□□□□ -2.03
SKP1-204ENST00000517691 OTUD3Q5T2D3 398 aaPredicted RBP2.4□□□□□ -2.03
SKP1-204ENST00000517691 EEF1A1P5Q5VTE0 462 aa2.4□□□□□ -2.03
SKP1-204ENST00000517691 TMEM268Q5VZI3 342 aa2.4□□□□□ -2.03
SKP1-204ENST00000517691 PRR27Q6MZM9 219 aa2.4□□□□□ -2.03
SKP1-204ENST00000517691 NIPAL3Q6P499 406 aa2.4□□□□□ -2.03
SKP1-204ENST00000517691 RNASEKQ6P5S7 137 aaKnown RBP2.4□□□□□ -2.03
SKP1-204ENST00000517691 VWA1Q6PCB0 445 aa2.4□□□□□ -2.03
SKP1-204ENST00000517691 ZNF613Q6PF04 617 aa2.4□□□□□ -2.03
SKP1-204ENST00000517691 CLEC18BQ6UXF7 455 aa2.4□□□□□ -2.03
SKP1-204ENST00000517691 CCDC121Q6ZUS5 278 aa2.4□□□□□ -2.03
SKP1-204ENST00000517691 SLC16A9Q7RTY1 509 aa2.4□□□□□ -2.03
SKP1-204ENST00000517691 DHFR2Q86XF0 187 aa2.4□□□□□ -2.03
SKP1-204ENST00000517691 CROCCP3Q8IVE0 287 aa2.4□□□□□ -2.03
SKP1-204ENST00000517691 ZNF100Q8IYN0 542 aa2.4□□□□□ -2.03
SKP1-204ENST00000517691 CDK20Q8IZL9 346 aa2.4□□□□□ -2.03
SKP1-204ENST00000517691 SLC38A6Q8IZM9 456 aa2.4□□□□□ -2.03
SKP1-204ENST00000517691 TMEM99Q8N816 258 aa2.4□□□□□ -2.03
SKP1-204ENST00000517691 CLEC18CQ8NCF0 446 aa2.4□□□□□ -2.03
SKP1-204ENST00000517691 PIGXQ8TBF5 258 aa2.4□□□□□ -2.03
SKP1-204ENST00000517691 TMEM255BQ8WV15 326 aa2.4□□□□□ -2.03
SKP1-204ENST00000517691 SLC38A4Q969I6 547 aa2.4□□□□□ -2.03
SKP1-204ENST00000517691 TAAR8Q969N4 342 aa2.4□□□□□ -2.03
SKP1-204ENST00000517691 MOB3AQ96BX8 217 aa2.4□□□□□ -2.03
SKP1-204ENST00000517691 STARD4Q96DR4 205 aa2.4□□□□□ -2.03
SKP1-204ENST00000517691 MRPL53Q96EL3 112 aaKnown RBP2.4□□□□□ -2.03
SKP1-204ENST00000517691 PYURFQ96I23 114 aa2.4□□□□□ -2.03
SKP1-204ENST00000517691 GMPPAQ96IJ6 420 aaPredicted RBP2.4□□□□□ -2.03
SKP1-204ENST00000517691 HARBI1Q96MB7 349 aa2.4□□□□□ -2.03
SKP1-204ENST00000517691 ZFP3Q96NJ6 502 aa2.4□□□□□ -2.03
SKP1-204ENST00000517691 WWC2-AS2Q96NR7 200 aa2.4□□□□□ -2.03
SKP1-204ENST00000517691 DUX5Q96PT3 197 aa2.4□□□□□ -2.03
SKP1-204ENST00000517691 ZNF300Q96RE9 604 aaPredicted RBP2.4□□□□□ -2.03
SKP1-204ENST00000517691 EPYCQ99645 322 aa2.4□□□□□ -2.03
SKP1-204ENST00000517691 IFT27Q9BW83 186 aa2.4□□□□□ -2.03
SKP1-204ENST00000517691 RBM24Q9BX46 236 aaKnown RBP2.4□□□□□ -2.03
SKP1-204ENST00000517691 PARD6GQ9BYG4 376 aaPredicted RBP2.4□□□□□ -2.03
SKP1-204ENST00000517691 TRIM15Q9C019 465 aa2.4□□□□□ -2.03
SKP1-204ENST00000517691 OPN3Q9H1Y3 402 aaPredicted RBP2.4□□□□□ -2.03
SKP1-204ENST00000517691 HIPK2Q9H2X6 1198 aa2.4□□□□□ -2.03
SKP1-204ENST00000517691 UBTD1Q9HAC8 227 aa2.4□□□□□ -2.03
SKP1-204ENST00000517691 NTN4Q9HB63 628 aa2.4□□□□□ -2.03
SKP1-204ENST00000517691 CDH20Q9HBT6 801 aa2.4□□□□□ -2.03
SKP1-204ENST00000517691 CHST11Q9NPF2 352 aa2.4□□□□□ -2.03
SKP1-204ENST00000517691 DCAF13Q9NV06 445 aaKnown RBP2.4□□□□□ -2.03
SKP1-204ENST00000517691 CLEC5AQ9NY25 188 aa2.4□□□□□ -2.03
SKP1-204ENST00000517691 OR14J1Q9UGF5 321 aa2.4□□□□□ -2.03
SKP1-204ENST00000517691 PRPF19Q9UMS4 504 aaKnown RBP2.4□□□□□ -2.03
SKP1-204ENST00000517691 PROCRQ9UNN8 238 aa2.4□□□□□ -2.03
SKP1-204ENST00000517691 RBMX2Q9Y388 322 aaKnown RBP2.4□□□□□ -2.03
SKP1-204ENST00000517691 LRP12Q9Y561 859 aa2.4□□□□□ -2.03
SKP1-204ENST00000517691 KLF2Q9Y5W3 355 aaPredicted RBP2.4□□□□□ -2.03
SKP1-204ENST00000517691 LRRK2Q5S007 2527 aa2.39□□□□□ -2.03
SKP1-204ENST00000517691 IGKV1D-42A0A075B6H8 117 aa2.39□□□□□ -2.03
SKP1-204ENST00000517691 ZNF814B7Z6K7 855 aa2.39□□□□□ -2.03
SKP1-204ENST00000517691 LRRN3E7EW58 273 aa2.39□□□□□ -2.03
SKP1-204ENST00000517691 C11orf98E9PRG8 122 aa2.39□□□□□ -2.03
SKP1-204ENST00000517691 PPIAL4DF5H284 164 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms