RNA–Protein interactions for RNA: ENST00000517275.3

RNU6-840P-201, Transcript of RNA, U6 small nuclear 840, pseudogene, humanhuman

BASIC

Gene RNU6-840P, Length 65 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-840P-201ENST00000517275 MLF1P58340 268 aa2.16□□□□□ -2.06
RNU6-840P-201ENST00000517275 ST3GAL4Q11206 333 aa2.16□□□□□ -2.06
RNU6-840P-201ENST00000517275 C2orf83Q53S99 150 aa2.16□□□□□ -2.06
RNU6-840P-201ENST00000517275 LCE3CQ5T5A8 94 aa2.16□□□□□ -2.06
RNU6-840P-201ENST00000517275 STEAP4Q687X5 459 aa2.16□□□□□ -2.06
RNU6-840P-201ENST00000517275 ZNF530Q6P9A1 599 aaPredicted RBP2.16□□□□□ -2.06
RNU6-840P-201ENST00000517275 DEGS2Q6QHC5 323 aa2.16□□□□□ -2.06
RNU6-840P-201ENST00000517275 RTL4Q6ZR62 310 aa2.16□□□□□ -2.06
RNU6-840P-201ENST00000517275 RAB43Q86YS6 212 aa2.16□□□□□ -2.06
RNU6-840P-201ENST00000517275 METTL13Q8N6R0 699 aa2.16□□□□□ -2.06
RNU6-840P-201ENST00000517275 ZNF433Q8N7K0 673 aaPredicted RBP2.16□□□□□ -2.06
RNU6-840P-201ENST00000517275 ZFAND1Q8TCF1 268 aa2.16□□□□□ -2.06
RNU6-840P-201ENST00000517275 SRSF12Q8WXF0 261 aaKnown RBP2.16□□□□□ -2.06
RNU6-840P-201ENST00000517275 ZNF799Q96GE5 643 aa2.16□□□□□ -2.06
RNU6-840P-201ENST00000517275 RDH12Q96NR8 316 aa2.16□□□□□ -2.06
RNU6-840P-201ENST00000517275 EMC6Q9BV81 110 aa2.16□□□□□ -2.06
RNU6-840P-201ENST00000517275 OSBPL11Q9BXB4 747 aa2.16□□□□□ -2.06
RNU6-840P-201ENST00000517275 ULBP2Q9BZM5 246 aa2.16□□□□□ -2.06
RNU6-840P-201ENST00000517275 SLIRPQ9GZT3 109 aaKnown RBP2.16□□□□□ -2.06
RNU6-840P-201ENST00000517275 SPNS1Q9H2V7 528 aa2.16□□□□□ -2.06
RNU6-840P-201ENST00000517275 TPK1Q9H3S4 243 aa2.16□□□□□ -2.06
RNU6-840P-201ENST00000517275 MYOZ1Q9NP98 299 aaPredicted RBP2.16□□□□□ -2.06
RNU6-840P-201ENST00000517275 VAPAQ9P0L0 249 aa2.16□□□□□ -2.06
RNU6-840P-201ENST00000517275 CTSFQ9UBX1 484 aa2.16□□□□□ -2.06
RNU6-840P-201ENST00000517275 OR12D3Q9UGF7 316 aa2.16□□□□□ -2.06
RNU6-840P-201ENST00000517275 V9GYY9 64 aa2.16□□□□□ -2.06
RNU6-840P-201ENST00000517275 TET2Q6N021 2002 aaPredicted RBP2.16□□□□□ -2.06
RNU6-840P-201ENST00000517275 MROH7Q68CQ1 1323 aa2.16□□□□□ -2.06
RNU6-840P-201ENST00000517275 IGHV2OR16-5A0A0B4J2B6 119 aa2.15□□□□□ -2.07
RNU6-840P-201ENST00000517275 IGKV1-8A0A0C4DH67 115 aa2.15□□□□□ -2.07
RNU6-840P-201ENST00000517275 LINC00854A0A1B0GVQ3 168 aa2.15□□□□□ -2.07
RNU6-840P-201ENST00000517275 BPY2O14599 106 aa2.15□□□□□ -2.07
RNU6-840P-201ENST00000517275 RDH16O75452 317 aa2.15□□□□□ -2.07
RNU6-840P-201ENST00000517275 YIF1AO95070 293 aa2.15□□□□□ -2.07
RNU6-840P-201ENST00000517275 GABARAPO95166 117 aa2.15□□□□□ -2.07
RNU6-840P-201ENST00000517275 SLC25A27O95847 323 aa2.15□□□□□ -2.07
RNU6-840P-201ENST00000517275 CST4P01036 141 aa2.15□□□□□ -2.07
RNU6-840P-201ENST00000517275 PTHP01270 115 aa2.15□□□□□ -2.07
RNU6-840P-201ENST00000517275 OR5AL1P0C617 328 aa2.15□□□□□ -2.07
RNU6-840P-201ENST00000517275 TLX1NBP0CAT3 122 aa2.15□□□□□ -2.07
RNU6-840P-201ENST00000517275 CXCR1P25024 350 aa2.15□□□□□ -2.07
RNU6-840P-201ENST00000517275 LCN1P31025 176 aa2.15□□□□□ -2.07
RNU6-840P-201ENST00000517275 ARL2P36404 184 aa2.15□□□□□ -2.07
RNU6-840P-201ENST00000517275 RPS10P46783 165 aaKnown RBP2.15□□□□□ -2.07
RNU6-840P-201ENST00000517275 ESRRGP62508 458 aa2.15□□□□□ -2.07
RNU6-840P-201ENST00000517275 RPL31P62899 125 aaKnown RBP2.15□□□□□ -2.07
RNU6-840P-201ENST00000517275 LOXL1Q08397 574 aaPredicted RBP2.15□□□□□ -2.07
RNU6-840P-201ENST00000517275 C2orf54Q08AI8 447 aa2.15□□□□□ -2.07
RNU6-840P-201ENST00000517275 CAPRIN1Q14444 709 aaKnown RBP2.15□□□□□ -2.07
RNU6-840P-201ENST00000517275 UBE2SQ16763 222 aa2.15□□□□□ -2.07
RNU6-840P-201ENST00000517275 TCEAL5Q5H9L2 206 aa2.15□□□□□ -2.07
RNU6-840P-201ENST00000517275 OR2T5Q6IEZ7 315 aa2.15□□□□□ -2.07
RNU6-840P-201ENST00000517275 C12orf54Q6X4T0 127 aa2.15□□□□□ -2.07
RNU6-840P-201ENST00000517275 PRSS58Q8IYP2 241 aa2.15□□□□□ -2.07
RNU6-840P-201ENST00000517275 CA13Q8N1Q1 262 aa2.15□□□□□ -2.07
RNU6-840P-201ENST00000517275 UBAC2Q8NBM4 344 aa2.15□□□□□ -2.07
RNU6-840P-201ENST00000517275 OR2T29Q8NH02 315 aa2.15□□□□□ -2.07
RNU6-840P-201ENST00000517275 PIFOQ8TCI5 191 aa2.15□□□□□ -2.07
RNU6-840P-201ENST00000517275 LRRC29Q8WV35 223 aa2.15□□□□□ -2.07
RNU6-840P-201ENST00000517275 RNF138Q8WVD3 245 aa2.15□□□□□ -2.07
RNU6-840P-201ENST00000517275 TCEAL3Q969E4 200 aa2.15□□□□□ -2.07
RNU6-840P-201ENST00000517275 PTX4Q96A99 478 aa2.15□□□□□ -2.07
RNU6-840P-201ENST00000517275 TM4SF18Q96CE8 201 aa2.15□□□□□ -2.07
RNU6-840P-201ENST00000517275 HDHD3Q9BSH5 251 aaPredicted RBP2.15□□□□□ -2.07
RNU6-840P-201ENST00000517275 CHRNA10Q9GZZ6 450 aa2.15□□□□□ -2.07
RNU6-840P-201ENST00000517275 ANKHQ9HCJ1 492 aa2.15□□□□□ -2.07
RNU6-840P-201ENST00000517275 ZNF229Q9UJW7 825 aa2.15□□□□□ -2.07
RNU6-840P-201ENST00000517275 TFR2Q9UP52 801 aa2.15□□□□□ -2.07
RNU6-840P-201ENST00000517275 GMEB1Q9Y692 573 aa2.15□□□□□ -2.07
RNU6-840P-201ENST00000517275 WSB1Q9Y6I7 421 aa2.15□□□□□ -2.07
RNU6-840P-201ENST00000517275 ATRXP46100 2492 aa2.15□□□□□ -2.07
RNU6-840P-201ENST00000517275 CROCCQ5TZA2 2017 aa2.15□□□□□ -2.07
RNU6-840P-201ENST00000517275 SEC14L6B5MCN3 397 aa2.14□□□□□ -2.07
RNU6-840P-201ENST00000517275 H7C2Y5 167 aa2.14□□□□□ -2.07
RNU6-840P-201ENST00000517275 TNFRSF11BO00300 401 aa2.14□□□□□ -2.07
RNU6-840P-201ENST00000517275 PSPHP1O15172 72 aa2.14□□□□□ -2.07
RNU6-840P-201ENST00000517275 B4GALT5O43286 388 aa2.14□□□□□ -2.07
RNU6-840P-201ENST00000517275 ANGPTL7O43827 346 aa2.14□□□□□ -2.07
RNU6-840P-201ENST00000517275 SLC22A5O76082 557 aa2.14□□□□□ -2.07
RNU6-840P-201ENST00000517275 FADS2O95864 444 aaKnown RBP2.14□□□□□ -2.07
RNU6-840P-201ENST00000517275 DNAH10OSP0CZ25 163 aa2.14□□□□□ -2.07
RNU6-840P-201ENST00000517275 PRPS2P11908 318 aa2.14□□□□□ -2.07
RNU6-840P-201ENST00000517275 DTYMKP23919 212 aa2.14□□□□□ -2.07
RNU6-840P-201ENST00000517275 ARR3P36575 388 aa2.14□□□□□ -2.07
RNU6-840P-201ENST00000517275 P2RY2P41231 377 aa2.14□□□□□ -2.07
RNU6-840P-201ENST00000517275 DNASE1L1P49184 302 aa2.14□□□□□ -2.07
RNU6-840P-201ENST00000517275 RAB7AP51149 207 aa2.14□□□□□ -2.07
RNU6-840P-201ENST00000517275 NDUFA8P51970 172 aa2.14□□□□□ -2.07
RNU6-840P-201ENST00000517275 PAFAH1B2P68402 229 aa2.14□□□□□ -2.07
RNU6-840P-201ENST00000517275 PPIDQ08752 370 aaKnown RBP2.14□□□□□ -2.07
RNU6-840P-201ENST00000517275 DGCR6Q14129 220 aa2.14□□□□□ -2.07
RNU6-840P-201ENST00000517275 TOMM34Q15785 309 aaPredicted RBP2.14□□□□□ -2.07
RNU6-840P-201ENST00000517275 TNXAQ16473 311 aa2.14□□□□□ -2.07
RNU6-840P-201ENST00000517275 TAL2Q16559 108 aa2.14□□□□□ -2.07
RNU6-840P-201ENST00000517275 ZNF658BQ4V348 819 aaPredicted RBP2.14□□□□□ -2.07
RNU6-840P-201ENST00000517275 Q5W150 140 aa2.14□□□□□ -2.07
RNU6-840P-201ENST00000517275 DUPD1Q68J44 220 aa2.14□□□□□ -2.07
RNU6-840P-201ENST00000517275 DNAJC24Q6P3W2 148 aa2.14□□□□□ -2.07
RNU6-840P-201ENST00000517275 FAHD1Q6P587 224 aa2.14□□□□□ -2.07
RNU6-840P-201ENST00000517275 TMEM205Q6UW68 189 aa2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms