RNA–Protein interactions for RNA: ENST00000516847.1

RN7SKP88-201, Transcript of RNA, 7SK small nuclear pseudogene 88, humanhuman

BASIC

Gene RN7SKP88, Length 250 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP88-201ENST00000516847 TFR2Q9UP52 801 aa0.93□□□□□ -2.26
RN7SKP88-201ENST00000516847 TRAPPC4Q9Y296 219 aa0.93□□□□□ -2.26
RN7SKP88-201ENST00000516847 POFUT2Q9Y2G5 429 aa0.93□□□□□ -2.26
RN7SKP88-201ENST00000516847 AP3M1Q9Y2T2 418 aa0.93□□□□□ -2.26
RN7SKP88-201ENST00000516847 SIGLEC9Q9Y336 463 aa0.93□□□□□ -2.26
RN7SKP88-201ENST00000516847 TSSC4Q9Y5U2 329 aaPredicted RBP0.93□□□□□ -2.26
RN7SKP88-201ENST00000516847 HEBP2Q9Y5Z4 205 aa0.93□□□□□ -2.26
RN7SKP88-201ENST00000516847 PUS1Q9Y606 427 aaKnown RBP eCLIP0.93□□□□□ -2.26
RN7SKP88-201ENST00000516847 MRPS18BQ9Y676 258 aaKnown RBP0.93□□□□□ -2.26
RN7SKP88-201ENST00000516847 AGRNO00468 2067 aa0.93□□□□□ -2.26
RN7SKP88-201ENST00000516847 PIKFYVEQ9Y2I7 2098 aa0.93□□□□□ -2.26
RN7SKP88-201ENST00000516847 LRPPRCP42704 1394 aaKnown RBP0.93□□□□□ -2.26
RN7SKP88-201ENST00000516847 PALLDQ8WX93 1383 aa0.93□□□□□ -2.26
RN7SKP88-201ENST00000516847 RAD50Q92878 1312 aa0.92□□□□□ -2.26
RN7SKP88-201ENST00000516847 CAMTA1Q9Y6Y1 1673 aa0.92□□□□□ -2.26
RN7SKP88-201ENST00000516847 ZNFX1Q9P2E3 1918 aaKnown RBP0.92□□□□□ -2.26
RN7SKP88-201ENST00000516847 IGLV11-55A0A075B6I3 123 aa0.92□□□□□ -2.26
RN7SKP88-201ENST00000516847 TRAV8-4A0A0B4J246 113 aa0.92□□□□□ -2.26
RN7SKP88-201ENST00000516847 IGHV1-69DA0A0B4J2H0 117 aa0.92□□□□□ -2.26
RN7SKP88-201ENST00000516847 IGHV3-66A0A0C4DH42 116 aa0.92□□□□□ -2.26
RN7SKP88-201ENST00000516847 IGHV3-64DA0A0J9YX35 117 aa0.92□□□□□ -2.26
RN7SKP88-201ENST00000516847 A0A0J9YXV3 536 aa0.92□□□□□ -2.26
RN7SKP88-201ENST00000516847 INS-IGF2F8WCM5 200 aa0.92□□□□□ -2.26
RN7SKP88-201ENST00000516847 K7EN84 100 aa0.92□□□□□ -2.26
RN7SKP88-201ENST00000516847 hCG_2039718K7EN88 272 aa0.92□□□□□ -2.26
RN7SKP88-201ENST00000516847 DNASE2O00115 360 aaPredicted RBP0.92□□□□□ -2.26
RN7SKP88-201ENST00000516847 TNFRSF11BO00300 401 aa0.92□□□□□ -2.26
RN7SKP88-201ENST00000516847 PSPHP1O15172 72 aa0.92□□□□□ -2.26
RN7SKP88-201ENST00000516847 TRAF3IP2O43734 574 aaPredicted RBP0.92□□□□□ -2.26
RN7SKP88-201ENST00000516847 NIPSNAP2O75323 286 aa0.92□□□□□ -2.26
RN7SKP88-201ENST00000516847 SUPT3HO75486 399 aa0.92□□□□□ -2.26
RN7SKP88-201ENST00000516847 RP2O75695 350 aa0.92□□□□□ -2.26
RN7SKP88-201ENST00000516847 TNFSF13O75888 250 aa0.92□□□□□ -2.26
RN7SKP88-201ENST00000516847 BRI3O95415 125 aa0.92□□□□□ -2.26
RN7SKP88-201ENST00000516847 KLF8O95600 359 aaPredicted RBP0.92□□□□□ -2.26
RN7SKP88-201ENST00000516847 CGAP01215 116 aa0.92□□□□□ -2.26
RN7SKP88-201ENST00000516847 INSP01308 110 aa0.92□□□□□ -2.26
RN7SKP88-201ENST00000516847 IGLV2-23P01705 113 aa0.92□□□□□ -2.26
RN7SKP88-201ENST00000516847 P01737 135 aa0.92□□□□□ -2.26
RN7SKP88-201ENST00000516847 FABP3P05413 133 aa0.92□□□□□ -2.26
RN7SKP88-201ENST00000516847 EIF4EP06730 217 aaKnown RBP0.92□□□□□ -2.26
RN7SKP88-201ENST00000516847 GIPP09681 153 aaPredicted RBP0.92□□□□□ -2.26
RN7SKP88-201ENST00000516847 SLC35G6P0C7Q6 338 aa0.92□□□□□ -2.26
RN7SKP88-201ENST00000516847 OCMP0CE72 109 aaPredicted RBP0.92□□□□□ -2.26
RN7SKP88-201ENST00000516847 SLC35E2BP0CK96 405 aa0.92□□□□□ -2.26
RN7SKP88-201ENST00000516847 THRAP10827 490 aa0.92□□□□□ -2.26
RN7SKP88-201ENST00000516847 ADRB3P13945 408 aa0.92□□□□□ -2.26
RN7SKP88-201ENST00000516847 ZNF3P17036 446 aa0.92□□□□□ -2.26
RN7SKP88-201ENST00000516847 PGAM1P18669 254 aa0.92□□□□□ -2.26
RN7SKP88-201ENST00000516847 FUT3P21217 361 aa0.92□□□□□ -2.26
RN7SKP88-201ENST00000516847 CXCR1P25024 350 aa0.92□□□□□ -2.26
RN7SKP88-201ENST00000516847 GTF2H1P32780 548 aa0.92□□□□□ -2.26
RN7SKP88-201ENST00000516847 KDELR2P33947 212 aa0.92□□□□□ -2.26
RN7SKP88-201ENST00000516847 UGT2B10P36537 528 aa0.92□□□□□ -2.26
RN7SKP88-201ENST00000516847 NUDT1P36639 197 aa0.92□□□□□ -2.26
RN7SKP88-201ENST00000516847 CEACAM6P40199 344 aa0.92□□□□□ -2.26
RN7SKP88-201ENST00000516847 CTRLP40313 264 aa0.92□□□□□ -2.26
RN7SKP88-201ENST00000516847 RBM34P42696 430 aaKnown RBP0.92□□□□□ -2.26
RN7SKP88-201ENST00000516847 CDKN2BP42772 138 aa0.92□□□□□ -2.26
RN7SKP88-201ENST00000516847 RANBP1P43487 201 aa0.92□□□□□ -2.26
RN7SKP88-201ENST00000516847 RPS9P46781 194 aaKnown RBP0.92□□□□□ -2.26
RN7SKP88-201ENST00000516847 NMUP48645 174 aa0.92□□□□□ -2.26
RN7SKP88-201ENST00000516847 EMP2P54851 167 aa0.92□□□□□ -2.26
RN7SKP88-201ENST00000516847 WNT4P56705 351 aa0.92□□□□□ -2.26
RN7SKP88-201ENST00000516847 OR2B6P58173 313 aa0.92□□□□□ -2.26
RN7SKP88-201ENST00000516847 RPS23P62266 143 aaKnown RBP0.92□□□□□ -2.26
RN7SKP88-201ENST00000516847 PAFAH1B2P68402 229 aa0.92□□□□□ -2.26
RN7SKP88-201ENST00000516847 REG3AQ06141 175 aa0.92□□□□□ -2.26
RN7SKP88-201ENST00000516847 PMS2P3Q13401 168 aa0.92□□□□□ -2.26
RN7SKP88-201ENST00000516847 COTL1Q14019 142 aa0.92□□□□□ -2.26
RN7SKP88-201ENST00000516847 GINS1Q14691 196 aa0.92□□□□□ -2.26
RN7SKP88-201ENST00000516847 C16orf72Q14CZ0 275 aa0.92□□□□□ -2.26
RN7SKP88-201ENST00000516847 PSG5Q15238 335 aa0.92□□□□□ -2.26
RN7SKP88-201ENST00000516847 IRF4Q15306 451 aa0.92□□□□□ -2.26
RN7SKP88-201ENST00000516847 MAPRE2Q15555 327 aa0.92□□□□□ -2.26
RN7SKP88-201ENST00000516847 ZSCAN26Q16670 478 aa0.92□□□□□ -2.26
RN7SKP88-201ENST00000516847 TMEM183BQ1AE95 376 aa0.92□□□□□ -2.26
RN7SKP88-201ENST00000516847 TMEM249Q2WGJ8 235 aa0.92□□□□□ -2.26
RN7SKP88-201ENST00000516847 BSXQ3C1V8 233 aa0.92□□□□□ -2.26
RN7SKP88-201ENST00000516847 KRTAP27-1Q3LI81 207 aa0.92□□□□□ -2.26
RN7SKP88-201ENST00000516847 CDNFQ49AH0 187 aa0.92□□□□□ -2.26
RN7SKP88-201ENST00000516847 ORMDL2Q53FV1 153 aa0.92□□□□□ -2.26
RN7SKP88-201ENST00000516847 TCEAL5Q5H9L2 206 aa0.92□□□□□ -2.26
RN7SKP88-201ENST00000516847 RBM48Q5RL73 367 aaKnown RBP0.92□□□□□ -2.26
RN7SKP88-201ENST00000516847 IDNKQ5T6J7 187 aa0.92□□□□□ -2.26
RN7SKP88-201ENST00000516847 FAM27D1Q5T7N8 215 aa0.92□□□□□ -2.26
RN7SKP88-201ENST00000516847 SYT6Q5T7P8 510 aaPredicted RBP0.92□□□□□ -2.26
RN7SKP88-201ENST00000516847 HES5Q5TA89 166 aa0.92□□□□□ -2.26
RN7SKP88-201ENST00000516847 STEAP4Q687X5 459 aa0.92□□□□□ -2.26
RN7SKP88-201ENST00000516847 ZNF774Q6NX45 483 aa0.92□□□□□ -2.26
RN7SKP88-201ENST00000516847 ARL9Q6T311 187 aa0.92□□□□□ -2.26
RN7SKP88-201ENST00000516847 C12orf54Q6X4T0 127 aa0.92□□□□□ -2.26
RN7SKP88-201ENST00000516847 PLEKHG7Q6ZR37 379 aa0.92□□□□□ -2.26
RN7SKP88-201ENST00000516847 FAM19A1Q7Z5A9 133 aa0.92□□□□□ -2.26
RN7SKP88-201ENST00000516847 SETD3Q86TU7 594 aaPredicted RBP0.92□□□□□ -2.26
RN7SKP88-201ENST00000516847 MYPOPQ86VE0 399 aaPredicted RBP0.92□□□□□ -2.26
RN7SKP88-201ENST00000516847 TGIF2LYQ8IUE0 185 aa0.92□□□□□ -2.26
RN7SKP88-201ENST00000516847 NKAIN4Q8IVV8 208 aa0.92□□□□□ -2.26
RN7SKP88-201ENST00000516847 SLC30A8Q8IWU4 369 aa0.92□□□□□ -2.26
RN7SKP88-201ENST00000516847 TMEM183AQ8IXX5 376 aa0.92□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms