RNA–Protein interactions for RNA: ENST00000516009.1

SCARNA20.1-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 138 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.1-201ENST00000516009 SPOCK1Q08629 439 aa6.64□□□□□ -1.35
SCARNA20.1-201ENST00000516009 RAB11BQ15907 218 aa6.64□□□□□ -1.35
SCARNA20.1-201ENST00000516009 GLYATL3Q5SZD4 288 aa6.64□□□□□ -1.35
SCARNA20.1-201ENST00000516009 METAP1DQ6UB28 335 aaPredicted RBP6.64□□□□□ -1.35
SCARNA20.1-201ENST00000516009 C3P1Q6ZMU1 363 aa6.64□□□□□ -1.35
SCARNA20.1-201ENST00000516009 Q6ZSR3 168 aa6.64□□□□□ -1.35
SCARNA20.1-201ENST00000516009 BEND4Q6ZU67 534 aa6.64□□□□□ -1.35
SCARNA20.1-201ENST00000516009 MDP1Q86V88 176 aa6.64□□□□□ -1.35
SCARNA20.1-201ENST00000516009 RPRMLQ8N4K4 120 aa6.64□□□□□ -1.35
SCARNA20.1-201ENST00000516009 KDF1Q8NAX2 398 aaPredicted RBP6.64□□□□□ -1.35
SCARNA20.1-201ENST00000516009 NAXEQ8NCW5 288 aa6.64□□□□□ -1.35
SCARNA20.1-201ENST00000516009 OR51A2Q8NGJ7 313 aa6.64□□□□□ -1.35
SCARNA20.1-201ENST00000516009 OR13C9Q8NGT0 318 aa6.64□□□□□ -1.35
SCARNA20.1-201ENST00000516009 OR5H6Q8NGV6 325 aa6.64□□□□□ -1.35
SCARNA20.1-201ENST00000516009 OR2AE1Q8NHA4 323 aa6.64□□□□□ -1.35
SCARNA20.1-201ENST00000516009 PP6455Q8WZ26 134 aa6.64□□□□□ -1.35
SCARNA20.1-201ENST00000516009 AKAP1Q92667 903 aaKnown RBP eCLIP6.64□□□□□ -1.35
SCARNA20.1-201ENST00000516009 FOXRED1Q96CU9 486 aaPredicted RBP6.64□□□□□ -1.35
SCARNA20.1-201ENST00000516009 C10orf35Q96D05 121 aa6.64□□□□□ -1.35
SCARNA20.1-201ENST00000516009 BOD1Q96IK1 185 aa6.64□□□□□ -1.35
SCARNA20.1-201ENST00000516009 LYZL4Q96KX0 146 aa6.64□□□□□ -1.35
SCARNA20.1-201ENST00000516009 CMTM3Q96MX0 182 aa6.64□□□□□ -1.35
SCARNA20.1-201ENST00000516009 SOX7Q9BT81 388 aa6.64□□□□□ -1.35
SCARNA20.1-201ENST00000516009 SFXN3Q9BWM7 321 aa6.64□□□□□ -1.35
SCARNA20.1-201ENST00000516009 C1QTNF5Q9BXJ0 243 aa6.64□□□□□ -1.35
SCARNA20.1-201ENST00000516009 OPN3Q9H1Y3 402 aaPredicted RBP6.64□□□□□ -1.35
SCARNA20.1-201ENST00000516009 RGCCQ9H4X1 137 aa6.64□□□□□ -1.35
SCARNA20.1-201ENST00000516009 LIN7BQ9HAP6 207 aa6.64□□□□□ -1.35
SCARNA20.1-201ENST00000516009 TMEM138Q9NPI0 162 aa6.64□□□□□ -1.35
SCARNA20.1-201ENST00000516009 EXTL2Q9UBQ6 330 aa6.64□□□□□ -1.35
SCARNA20.1-201ENST00000516009 STEAP1Q9UHE8 339 aa6.64□□□□□ -1.35
SCARNA20.1-201ENST00000516009 SPATA2Q9UM82 520 aa6.64□□□□□ -1.35
SCARNA20.1-201ENST00000516009 ZNF835Q9Y2P0 537 aa6.64□□□□□ -1.35
SCARNA20.1-201ENST00000516009 ETV7Q9Y603 341 aa6.64□□□□□ -1.35
SCARNA20.1-201ENST00000516009 V9GYH0 126 aa6.64□□□□□ -1.35
SCARNA20.1-201ENST00000516009 V9GYS6 101 aa6.64□□□□□ -1.35
SCARNA20.1-201ENST00000516009 DSPP15924 2871 aaKnown RBP6.64□□□□□ -1.35
SCARNA20.1-201ENST00000516009 RP1L1Q8IWN7 2480 aaPredicted RBP6.64□□□□□ -1.35
SCARNA20.1-201ENST00000516009 BSNQ9UPA5 3926 aa6.63□□□□□ -1.35
SCARNA20.1-201ENST00000516009 DHRS7CA6NNS2 312 aa6.63□□□□□ -1.35
SCARNA20.1-201ENST00000516009 SLC17A2O00624 439 aa6.63□□□□□ -1.35
SCARNA20.1-201ENST00000516009 MSTNO14793 375 aa6.63□□□□□ -1.35
SCARNA20.1-201ENST00000516009 MAGEB3O15480 346 aa6.63□□□□□ -1.35
SCARNA20.1-201ENST00000516009 SULT1B1O43704 296 aa6.63□□□□□ -1.35
SCARNA20.1-201ENST00000516009 UPK1BO75841 260 aa6.63□□□□□ -1.35
SCARNA20.1-201ENST00000516009 EIF4EP06730 217 aaKnown RBP6.63□□□□□ -1.35
SCARNA20.1-201ENST00000516009 OCMP0CE72 109 aaPredicted RBP6.63□□□□□ -1.35
SCARNA20.1-201ENST00000516009 CD37P11049 281 aa6.63□□□□□ -1.35
SCARNA20.1-201ENST00000516009 CCL2P13500 99 aa6.63□□□□□ -1.35
SCARNA20.1-201ENST00000516009 PTBP1P26599 531 aaKnown RBP eCLIP6.63□□□□□ -1.35
SCARNA20.1-201ENST00000516009 HTR2CP28335 458 aa6.63□□□□□ -1.35
SCARNA20.1-201ENST00000516009 OPRM1P35372 400 aa6.63□□□□□ -1.35
SCARNA20.1-201ENST00000516009 RANBP1P43487 201 aa6.63□□□□□ -1.35
SCARNA20.1-201ENST00000516009 MAP2K3P46734 347 aa6.63□□□□□ -1.35
SCARNA20.1-201ENST00000516009 IDH3GP51553 393 aaPredicted RBP6.63□□□□□ -1.35
SCARNA20.1-201ENST00000516009 CLDN12P56749 244 aa6.63□□□□□ -1.35
SCARNA20.1-201ENST00000516009 RIPPLY1Q0D2K3 151 aa6.63□□□□□ -1.35
SCARNA20.1-201ENST00000516009 PMPCAQ10713 525 aa6.63□□□□□ -1.35
SCARNA20.1-201ENST00000516009 MALLQ13021 153 aa6.63□□□□□ -1.35
SCARNA20.1-201ENST00000516009 MRPL49Q13405 166 aaKnown RBP6.63□□□□□ -1.35
SCARNA20.1-201ENST00000516009 TSC22D1Q15714 1073 aa6.63□□□□□ -1.35
SCARNA20.1-201ENST00000516009 ZNF79Q15937 498 aa6.63□□□□□ -1.35
SCARNA20.1-201ENST00000516009 TBC1D28Q2M2D7 210 aa6.63□□□□□ -1.35
SCARNA20.1-201ENST00000516009 ZNF181Q2M3W8 571 aa6.63□□□□□ -1.35
SCARNA20.1-201ENST00000516009 UBE2NLQ5JXB2 153 aa6.63□□□□□ -1.35
SCARNA20.1-201ENST00000516009 ZNF529Q6P280 563 aa6.63□□□□□ -1.35
SCARNA20.1-201ENST00000516009 XKRXQ6PP77 449 aa6.63□□□□□ -1.35
SCARNA20.1-201ENST00000516009 COLCA1Q6ZS62 124 aa6.63□□□□□ -1.35
SCARNA20.1-201ENST00000516009 BHLHA15Q7RTS1 189 aaPredicted RBP6.63□□□□□ -1.35
SCARNA20.1-201ENST00000516009 CXorf67Q86X51 503 aaPredicted RBP6.63□□□□□ -1.35
SCARNA20.1-201ENST00000516009 ZNF584Q8IVC4 421 aa6.63□□□□□ -1.35
SCARNA20.1-201ENST00000516009 C17orf78Q8N4C9 275 aa6.63□□□□□ -1.35
SCARNA20.1-201ENST00000516009 JAGN1Q8N5M9 183 aa6.63□□□□□ -1.35
SCARNA20.1-201ENST00000516009 SLC30A7Q8NEW0 376 aa6.63□□□□□ -1.35
SCARNA20.1-201ENST00000516009 SEMA6DQ8NFY4 1073 aa6.63□□□□□ -1.35
SCARNA20.1-201ENST00000516009 OR4M1Q8NGD0 313 aa6.63□□□□□ -1.35
SCARNA20.1-201ENST00000516009 OR6M1Q8NGM8 313 aa6.63□□□□□ -1.35
SCARNA20.1-201ENST00000516009 APOBEC3DQ96AK3 386 aaPredicted RBP6.63□□□□□ -1.35
SCARNA20.1-201ENST00000516009 POM121L2Q96KW2 1035 aa6.63□□□□□ -1.35
SCARNA20.1-201ENST00000516009 CCDC32Q9BV29 185 aa6.63□□□□□ -1.35
SCARNA20.1-201ENST00000516009 CDH20Q9HBT6 801 aa6.63□□□□□ -1.35
SCARNA20.1-201ENST00000516009 OBP2BQ9NPH6 170 aa6.63□□□□□ -1.35
SCARNA20.1-201ENST00000516009 ABCB10Q9NRK6 738 aa6.63□□□□□ -1.35
SCARNA20.1-201ENST00000516009 CYSLTR2Q9NS75 346 aa6.63□□□□□ -1.35
SCARNA20.1-201ENST00000516009 CGGBP1Q9UFW8 167 aaPredicted RBP6.63□□□□□ -1.35
SCARNA20.1-201ENST00000516009 TINAGQ9UJW2 476 aa6.63□□□□□ -1.35
SCARNA20.1-201ENST00000516009 PIGLQ9Y2B2 252 aa6.63□□□□□ -1.35
SCARNA20.1-201ENST00000516009 LOC100289279A0A1B0GTE1 492 aa6.62□□□□□ -1.35
SCARNA20.1-201ENST00000516009 hCG_38984A0A1B0GV85 526 aa6.62□□□□□ -1.35
SCARNA20.1-201ENST00000516009 A0A1W2PR80 420 aa6.62□□□□□ -1.35
SCARNA20.1-201ENST00000516009 ALX3O95076 343 aa6.62□□□□□ -1.35
SCARNA20.1-201ENST00000516009 ALDOBP05062 364 aa6.62□□□□□ -1.35
SCARNA20.1-201ENST00000516009 HCKP08631 526 aa6.62□□□□□ -1.35
SCARNA20.1-201ENST00000516009 CBR1P16152 277 aa6.62□□□□□ -1.35
SCARNA20.1-201ENST00000516009 FAHP16930 419 aa6.62□□□□□ -1.35
SCARNA20.1-201ENST00000516009 ZNF14P17017 642 aaPredicted RBP6.62□□□□□ -1.35
SCARNA20.1-201ENST00000516009 IL32P24001 234 aa6.62□□□□□ -1.35
SCARNA20.1-201ENST00000516009 AZGP1P25311 298 aaKnown RBP6.62□□□□□ -1.35
SCARNA20.1-201ENST00000516009 GSK3AP49840 483 aa6.62□□□□□ -1.35
SCARNA20.1-201ENST00000516009 CAPZA1P52907 286 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms