RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 BTNL2Q9UIR0 455 aa2.27□□□□□ -2.05
HERC4-215ENST00000515753 ZNF229Q9UJW7 825 aa2.27□□□□□ -2.05
HERC4-215ENST00000515753 C15orf41Q9Y2V0 281 aa2.27□□□□□ -2.05
HERC4-215ENST00000515753 UGT2A1Q9Y4X1 527 aa2.27□□□□□ -2.05
HERC4-215ENST00000515753 TRIOBPQ9H2D6 2365 aa2.26□□□□□ -2.05
HERC4-215ENST00000515753 TRAV39A0A0B4J263 110 aa2.26□□□□□ -2.05
HERC4-215ENST00000515753 KLF18A0A0U1RQI7 1052 aa2.26□□□□□ -2.05
HERC4-215ENST00000515753 ZNF816-ZNF321PA0A0X1KG74 233 aa2.26□□□□□ -2.05
HERC4-215ENST00000515753 RBMY1BA6NDE4 496 aaKnown RBP2.26□□□□□ -2.05
HERC4-215ENST00000515753 A6NDN8 102 aa2.26□□□□□ -2.05
HERC4-215ENST00000515753 RBMY1EA6NEQ0 496 aaKnown RBP2.26□□□□□ -2.05
HERC4-215ENST00000515753 C12orf77C9JDV5 145 aa2.26□□□□□ -2.05
HERC4-215ENST00000515753 H3BN98 237 aa2.26□□□□□ -2.05
HERC4-215ENST00000515753 PLPP1O14494 284 aa2.26□□□□□ -2.05
HERC4-215ENST00000515753 PRMT5O14744 637 aaPredicted RBP2.26□□□□□ -2.05
HERC4-215ENST00000515753 SLC9A3R1O14745 358 aaPredicted RBP2.26□□□□□ -2.05
HERC4-215ENST00000515753 RAD51CO43502 376 aa2.26□□□□□ -2.05
HERC4-215ENST00000515753 ICOSLGO75144 302 aa2.26□□□□□ -2.05
HERC4-215ENST00000515753 PLEKHA8P1O95397 391 aa2.26□□□□□ -2.05
HERC4-215ENST00000515753 IGHV3-48P01763 117 aa2.26□□□□□ -2.05
HERC4-215ENST00000515753 RBMY1DP0C7P1 496 aaKnown RBP2.26□□□□□ -2.05
HERC4-215ENST00000515753 RBMY1A1P0DJD3 496 aaKnown RBP2.26□□□□□ -2.05
HERC4-215ENST00000515753 SERPINB5P36952 375 aa2.26□□□□□ -2.05
HERC4-215ENST00000515753 MDH2P40926 338 aaKnown RBP2.26□□□□□ -2.05
HERC4-215ENST00000515753 RFC3P40938 356 aa2.26□□□□□ -2.05
HERC4-215ENST00000515753 HTR2BP41595 481 aa2.26□□□□□ -2.05
HERC4-215ENST00000515753 ATP5J2P56134 94 aa2.26□□□□□ -2.05
HERC4-215ENST00000515753 TAS2R39P59534 338 aa2.26□□□□□ -2.05
HERC4-215ENST00000515753 ATP6V0D1P61421 351 aa2.26□□□□□ -2.05
HERC4-215ENST00000515753 TPM4P67936 248 aa2.26□□□□□ -2.05
HERC4-215ENST00000515753 CXCL6P80162 114 aa2.26□□□□□ -2.05
HERC4-215ENST00000515753 SLC25A11Q02978 314 aaKnown RBP2.26□□□□□ -2.05
HERC4-215ENST00000515753 ACVR1Q04771 509 aa2.26□□□□□ -2.05
HERC4-215ENST00000515753 LRRC63Q05C16 580 aa2.26□□□□□ -2.05
HERC4-215ENST00000515753 ZNF763Q0D2J5 394 aa2.26□□□□□ -2.05
HERC4-215ENST00000515753 TWF1Q12792 350 aa2.26□□□□□ -2.05
HERC4-215ENST00000515753 PDIA2Q13087 525 aaKnown RBP2.26□□□□□ -2.05
HERC4-215ENST00000515753 CLINT1Q14677 625 aa2.26□□□□□ -2.05
HERC4-215ENST00000515753 GABRA6Q16445 453 aa2.26□□□□□ -2.05
HERC4-215ENST00000515753 C5orf64Q2M2E5 130 aa2.26□□□□□ -2.05
HERC4-215ENST00000515753 UBE2UQ5VVX9 321 aa2.26□□□□□ -2.05
HERC4-215ENST00000515753 MBOAT1Q6ZNC8 495 aa2.26□□□□□ -2.05
HERC4-215ENST00000515753 NKAPP1Q8N9T2 125 aa2.26□□□□□ -2.05
HERC4-215ENST00000515753 NOXO1Q8NFA2 376 aa2.26□□□□□ -2.05
HERC4-215ENST00000515753 OR6N2Q8NGY6 317 aa2.26□□□□□ -2.05
HERC4-215ENST00000515753 DNAJB3Q8WWF6 145 aa2.26□□□□□ -2.05
HERC4-215ENST00000515753 MED8Q96G25 268 aa2.26□□□□□ -2.05
HERC4-215ENST00000515753 RNF170Q96K19 258 aa2.26□□□□□ -2.05
HERC4-215ENST00000515753 ZNF317Q96PQ6 595 aaPredicted RBP2.26□□□□□ -2.05
HERC4-215ENST00000515753 OR5B12Q96R08 314 aa2.26□□□□□ -2.05
HERC4-215ENST00000515753 CYTH2Q99418 400 aa2.26□□□□□ -2.05
HERC4-215ENST00000515753 ZNF184Q99676 751 aaPredicted RBP2.26□□□□□ -2.05
HERC4-215ENST00000515753 KIR2DL4Q99706 377 aa2.26□□□□□ -2.05
HERC4-215ENST00000515753 HES7Q9BYE0 225 aa2.26□□□□□ -2.05
HERC4-215ENST00000515753 PRRG3Q9BZD7 231 aa2.26□□□□□ -2.05
HERC4-215ENST00000515753 SYT4Q9H2B2 425 aa2.26□□□□□ -2.05
HERC4-215ENST00000515753 ARMC7Q9H6L4 198 aa2.26□□□□□ -2.05
HERC4-215ENST00000515753 ZDHHC11Q9H8X9 412 aa2.26□□□□□ -2.05
HERC4-215ENST00000515753 PLGRKTQ9HBL7 147 aa2.26□□□□□ -2.05
HERC4-215ENST00000515753 MRM3Q9HC36 420 aaKnown RBP2.26□□□□□ -2.05
HERC4-215ENST00000515753 ACP6Q9NPH0 428 aa2.26□□□□□ -2.05
HERC4-215ENST00000515753 CTPS2Q9NRF8 586 aa2.26□□□□□ -2.05
HERC4-215ENST00000515753 STMN3Q9NZ72 180 aa2.26□□□□□ -2.05
HERC4-215ENST00000515753 XCL2Q9UBD3 114 aa2.26□□□□□ -2.05
HERC4-215ENST00000515753 ASF1AQ9Y294 204 aa2.26□□□□□ -2.05
HERC4-215ENST00000515753 UBIAD1Q9Y5Z9 338 aa2.26□□□□□ -2.05
HERC4-215ENST00000515753 DOCK2Q92608 1830 aa2.26□□□□□ -2.05
HERC4-215ENST00000515753 COL4A6Q14031 1691 aa2.25□□□□□ -2.05
HERC4-215ENST00000515753 A0A0D9SFI3 127 aa2.25□□□□□ -2.05
HERC4-215ENST00000515753 A0A1B0GW55 424 aa2.25□□□□□ -2.05
HERC4-215ENST00000515753 ZNF726A6NNF4 738 aa2.25□□□□□ -2.05
HERC4-215ENST00000515753 SMKR1H3BMG3 65 aa2.25□□□□□ -2.05
HERC4-215ENST00000515753 HAT1O14929 419 aa2.25□□□□□ -2.05
HERC4-215ENST00000515753 TNRC18O15417 2968 aaPredicted RBP2.25□□□□□ -2.05
HERC4-215ENST00000515753 ZNF780AO75290 641 aaPredicted RBP2.25□□□□□ -2.05
HERC4-215ENST00000515753 MPDU1O75352 247 aa2.25□□□□□ -2.05
HERC4-215ENST00000515753 ENTPD5O75356 428 aa2.25□□□□□ -2.05
HERC4-215ENST00000515753 ZMPSTE24O75844 475 aa2.25□□□□□ -2.05
HERC4-215ENST00000515753 CDK14O94921 469 aa2.25□□□□□ -2.05
HERC4-215ENST00000515753 FADS2O95864 444 aaKnown RBP2.25□□□□□ -2.05
HERC4-215ENST00000515753 CST4P01036 141 aa2.25□□□□□ -2.05
HERC4-215ENST00000515753 RPN2P04844 631 aa2.25□□□□□ -2.05
HERC4-215ENST00000515753 ARG1P05089 322 aa2.25□□□□□ -2.05
HERC4-215ENST00000515753 TPM3P06753 285 aa2.25□□□□□ -2.05
HERC4-215ENST00000515753 DUX4L2P0CJ85 424 aa2.25□□□□□ -2.05
HERC4-215ENST00000515753 DUX4L3P0CJ86 424 aa2.25□□□□□ -2.05
HERC4-215ENST00000515753 DUX4L5P0CJ88 424 aa2.25□□□□□ -2.05
HERC4-215ENST00000515753 DUX4L6P0CJ89 424 aa2.25□□□□□ -2.05
HERC4-215ENST00000515753 DUX4L7P0CJ90 424 aa2.25□□□□□ -2.05
HERC4-215ENST00000515753 ZNF250P15622 560 aa2.25□□□□□ -2.05
HERC4-215ENST00000515753 RAB4AP20338 218 aa2.25□□□□□ -2.05
HERC4-215ENST00000515753 IL32P24001 234 aa2.25□□□□□ -2.05
HERC4-215ENST00000515753 ZBTB25P24278 435 aa2.25□□□□□ -2.05
HERC4-215ENST00000515753 HTR2CP28335 458 aa2.25□□□□□ -2.05
HERC4-215ENST00000515753 IL12BP29460 328 aa2.25□□□□□ -2.05
HERC4-215ENST00000515753 CD52P31358 61 aa2.25□□□□□ -2.05
HERC4-215ENST00000515753 VDAC2P45880 294 aaPredicted RBP2.25□□□□□ -2.05
HERC4-215ENST00000515753 RORCP51449 518 aa2.25□□□□□ -2.05
HERC4-215ENST00000515753 CSNK1G2P78368 415 aa2.25□□□□□ -2.05
HERC4-215ENST00000515753 EGFEM1PQ0D2K5 195 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms