RNA–Protein interactions for RNA: ENST00000515597.1

LINC01088-211, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best)

Gene LINC01088, Length 664 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-211ENST00000515597 FAM78AQ5JUQ0 283 aa1.98□□□□□ -2.09
LINC01088-211ENST00000515597 VAX1Q5SQQ9 334 aa1.98□□□□□ -2.09
LINC01088-211ENST00000515597 ZNF880Q6PDB4 577 aa1.98□□□□□ -2.09
LINC01088-211ENST00000515597 CCDC73Q6ZRK6 1079 aa1.98□□□□□ -2.09
LINC01088-211ENST00000515597 NEGR1Q7Z3B1 354 aa1.98□□□□□ -2.09
LINC01088-211ENST00000515597 HDDC2Q7Z4H3 204 aa1.98□□□□□ -2.09
LINC01088-211ENST00000515597 FAM228AQ86W67 206 aa1.98□□□□□ -2.09
LINC01088-211ENST00000515597 PSTKQ8IV42 348 aaKnown RBP1.98□□□□□ -2.09
LINC01088-211ENST00000515597 STPG2Q8N412 459 aa1.98□□□□□ -2.09
LINC01088-211ENST00000515597 DEFB119Q8N690 84 aa1.98□□□□□ -2.09
LINC01088-211ENST00000515597 C15orf56Q8N910 161 aa1.98□□□□□ -2.09
LINC01088-211ENST00000515597 ZNF709Q8N972 641 aa1.98□□□□□ -2.09
LINC01088-211ENST00000515597 PPTC7Q8NI37 304 aa1.98□□□□□ -2.09
LINC01088-211ENST00000515597 TMEM54Q969K7 222 aa1.98□□□□□ -2.09
LINC01088-211ENST00000515597 TCEAL4Q96EI5 215 aa1.98□□□□□ -2.09
LINC01088-211ENST00000515597 PIK3IP1Q96FE7 263 aa1.98□□□□□ -2.09
LINC01088-211ENST00000515597 OR10C1Q96KK4 312 aa1.98□□□□□ -2.09
LINC01088-211ENST00000515597 RNF157Q96PX1 679 aa1.98□□□□□ -2.09
LINC01088-211ENST00000515597 ZNF2Q9BSG1 426 aaPredicted RBP1.98□□□□□ -2.09
LINC01088-211ENST00000515597 CHAC1Q9BUX1 264 aa1.98□□□□□ -2.09
LINC01088-211ENST00000515597 ING2Q9H160 280 aa1.98□□□□□ -2.09
LINC01088-211ENST00000515597 RPF2Q9H7B2 306 aaKnown RBP1.98□□□□□ -2.09
LINC01088-211ENST00000515597 ZNF355PQ9NSJ1 428 aa1.98□□□□□ -2.09
LINC01088-211ENST00000515597 ANKHD1Q8IWZ3 2542 aaKnown RBP1.98□□□□□ -2.09
LINC01088-211ENST00000515597 CENPEQ02224 2701 aa1.98□□□□□ -2.09
LINC01088-211ENST00000515597 RTTNQ86VV8 2226 aa1.98□□□□□ -2.09
LINC01088-211ENST00000515597 NBASA2RRP1 2371 aa1.98□□□□□ -2.09
LINC01088-211ENST00000515597 FN1P02751 2386 aaKnown RBP1.98□□□□□ -2.09
LINC01088-211ENST00000515597 ZFC3H1O60293 1989 aaKnown RBP1.98□□□□□ -2.09
LINC01088-211ENST00000515597 BAZ2AQ9UIF9 1905 aaKnown RBP1.97□□□□□ -2.09
LINC01088-211ENST00000515597 PDCD11Q14690 1871 aaKnown RBP1.97□□□□□ -2.09
LINC01088-211ENST00000515597 IGHV5-10-1A0A0J9YXX1 117 aa1.97□□□□□ -2.09
LINC01088-211ENST00000515597 A0A1B0GVX0 72 aa1.97□□□□□ -2.09
LINC01088-211ENST00000515597 GSTTP1A0A1W2PQM5 241 aa1.97□□□□□ -2.09
LINC01088-211ENST00000515597 MYBPHLA2RUH7 354 aa1.97□□□□□ -2.09
LINC01088-211ENST00000515597 COLCA2A8K830 154 aa1.97□□□□□ -2.09
LINC01088-211ENST00000515597 CASC3O15234 703 aaKnown RBP1.97□□□□□ -2.09
LINC01088-211ENST00000515597 CCL16O15467 120 aa1.97□□□□□ -2.09
LINC01088-211ENST00000515597 SRP72O76094 671 aaKnown RBP1.97□□□□□ -2.09
LINC01088-211ENST00000515597 RCBTB2O95199 551 aa1.97□□□□□ -2.09
LINC01088-211ENST00000515597 C1orf105O95561 183 aa1.97□□□□□ -2.09
LINC01088-211ENST00000515597 U2AF2P26368 475 aaKnown RBP eCLIP1.97□□□□□ -2.09
LINC01088-211ENST00000515597 CSNK1A1P48729 337 aa1.97□□□□□ -2.09
LINC01088-211ENST00000515597 SEC61GP60059 68 aa1.97□□□□□ -2.09
LINC01088-211ENST00000515597 IL24Q13007 206 aa1.97□□□□□ -2.09
LINC01088-211ENST00000515597 PON2Q15165 354 aa1.97□□□□□ -2.09
LINC01088-211ENST00000515597 C6orf226Q5I0X4 101 aa1.97□□□□□ -2.09
LINC01088-211ENST00000515597 KPRPQ5T749 579 aaPredicted RBP1.97□□□□□ -2.09
LINC01088-211ENST00000515597 SHISA6Q6ZSJ9 500 aa1.97□□□□□ -2.09
LINC01088-211ENST00000515597 BHLHA15Q7RTS1 189 aaPredicted RBP1.97□□□□□ -2.09
LINC01088-211ENST00000515597 OR4F6Q8NGB9 312 aa1.97□□□□□ -2.09
LINC01088-211ENST00000515597 ZNF461Q8TAF7 563 aa1.97□□□□□ -2.09
LINC01088-211ENST00000515597 PHF10Q8WUB8 498 aaKnown RBP1.97□□□□□ -2.09
LINC01088-211ENST00000515597 PIBF1Q8WXW3 757 aa1.97□□□□□ -2.09
LINC01088-211ENST00000515597 CREB3L1Q96BA8 519 aa1.97□□□□□ -2.09
LINC01088-211ENST00000515597 FAM3DQ96BQ1 224 aa1.97□□□□□ -2.09
LINC01088-211ENST00000515597 MBOAT7Q96N66 472 aa1.97□□□□□ -2.09
LINC01088-211ENST00000515597 SLC25A2Q9BXI2 301 aa1.97□□□□□ -2.09
LINC01088-211ENST00000515597 LRRC40Q9H9A6 602 aa1.97□□□□□ -2.09
LINC01088-211ENST00000515597 NT5MQ9NPB1 228 aa1.97□□□□□ -2.09
LINC01088-211ENST00000515597 FAM49BQ9NUQ9 324 aa1.97□□□□□ -2.09
LINC01088-211ENST00000515597 IKZF2Q9UKS7 526 aa1.97□□□□□ -2.09
LINC01088-211ENST00000515597 BIRC6Q9NR09 4857 aa1.97□□□□□ -2.09
LINC01088-211ENST00000515597 MYO16Q9Y6X6 1858 aa1.97□□□□□ -2.09
LINC01088-211ENST00000515597 KIAA1549LQ6ZVL6 1849 aa1.96□□□□□ -2.1
LINC01088-211ENST00000515597 ZBED9Q6R2W3 1325 aa1.96□□□□□ -2.1
LINC01088-211ENST00000515597 CUBNO60494 3623 aa1.96□□□□□ -2.1
LINC01088-211ENST00000515597 FAM240BA0A1B0GVZ2 78 aa1.96□□□□□ -2.1
LINC01088-211ENST00000515597 BTBD17A6NE02 478 aa1.96□□□□□ -2.1
LINC01088-211ENST00000515597 OR52A4PA6NMU1 304 aa1.96□□□□□ -2.1
LINC01088-211ENST00000515597 SPECC1L-ADORA2AF8WAN1 911 aa1.96□□□□□ -2.1
LINC01088-211ENST00000515597 GOSR2O14653 212 aa1.96□□□□□ -2.1
LINC01088-211ENST00000515597 RBFOX2O43251 390 aaKnown RBP eCLIP1.96□□□□□ -2.12e-7■■■■□ 26.4
LINC01088-211ENST00000515597 NMT2O60551 498 aa1.96□□□□□ -2.1
LINC01088-211ENST00000515597 IL1BP01584 269 aa1.96□□□□□ -2.1
LINC01088-211ENST00000515597 BCHEP06276 602 aa1.96□□□□□ -2.1
LINC01088-211ENST00000515597 ADRA2AP08913 450 aa1.96□□□□□ -2.1
LINC01088-211ENST00000515597 ATP1B2P14415 290 aaPredicted RBP1.96□□□□□ -2.1
LINC01088-211ENST00000515597 ETS2P15036 469 aa1.96□□□□□ -2.1
LINC01088-211ENST00000515597 HRH1P35367 487 aa1.96□□□□□ -2.1
LINC01088-211ENST00000515597 CDKN2BP42772 138 aa1.96□□□□□ -2.1
LINC01088-211ENST00000515597 CX3CR1P49238 355 aa1.96□□□□□ -2.1
LINC01088-211ENST00000515597 HNMTP50135 292 aa1.96□□□□□ -2.1
LINC01088-211ENST00000515597 NUTF2P61970 127 aaKnown RBP1.96□□□□□ -2.1
LINC01088-211ENST00000515597 ESRRGP62508 458 aa1.96□□□□□ -2.1
LINC01088-211ENST00000515597 Q5W150 140 aa1.96□□□□□ -2.1
LINC01088-211ENST00000515597 ZNF836Q6ZNA1 936 aa1.96□□□□□ -2.1
LINC01088-211ENST00000515597 TEX43Q6ZNM6 134 aa1.96□□□□□ -2.1
LINC01088-211ENST00000515597 SLC25A48Q6ZT89 311 aaKnown RBP1.96□□□□□ -2.1
LINC01088-211ENST00000515597 RUFY3Q7L099 469 aa1.96□□□□□ -2.1
LINC01088-211ENST00000515597 RIMKLAQ8IXN7 391 aa1.96□□□□□ -2.1
LINC01088-211ENST00000515597 PRSS58Q8IYP2 241 aa1.96□□□□□ -2.1
LINC01088-211ENST00000515597 NOXO1Q8NFA2 376 aa1.96□□□□□ -2.1
LINC01088-211ENST00000515597 RHEBL1Q8TAI7 183 aa1.96□□□□□ -2.1
LINC01088-211ENST00000515597 ABHD3Q8WU67 409 aa1.96□□□□□ -2.1
LINC01088-211ENST00000515597 RGP1Q92546 391 aaPredicted RBP1.96□□□□□ -2.1
LINC01088-211ENST00000515597 ZNF382Q96SR6 550 aa1.96□□□□□ -2.1
LINC01088-211ENST00000515597 CXCL16Q9H2A7 254 aa1.96□□□□□ -2.1
LINC01088-211ENST00000515597 ETNK2Q9NVF9 386 aa1.96□□□□□ -2.1
LINC01088-211ENST00000515597 CTSFQ9UBX1 484 aa1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms