RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 DSCAMO60469 2012 aa7.2□□□□□ -1.26
CCL28-204ENST00000514421 IGHV2OR16-5A0A0B4J2B6 119 aa7.19□□□□□ -1.26
CCL28-204ENST00000514421 A0A0G2JK05 382 aa7.19□□□□□ -1.26
CCL28-204ENST00000514421 A0A1W2PPL8 197 aa7.19□□□□□ -1.26
CCL28-204ENST00000514421 ATP6V1G2-DDX39BF2Z307 99 aa7.19□□□□□ -1.26
CCL28-204ENST00000514421 SMPD2O60906 423 aa7.19□□□□□ -1.26
CCL28-204ENST00000514421 CD8AP01732 235 aa7.19□□□□□ -1.26
CCL28-204ENST00000514421 SOD3P08294 240 aa7.19□□□□□ -1.26
CCL28-204ENST00000514421 CLEC2LP0C7M8 214 aa7.19□□□□□ -1.26
CCL28-204ENST00000514421 ZNF35P13682 527 aa7.19□□□□□ -1.26
CCL28-204ENST00000514421 ZNF14P17017 642 aaPredicted RBP7.19□□□□□ -1.26
CCL28-204ENST00000514421 MSR1P21757 451 aa7.19□□□□□ -1.26
CCL28-204ENST00000514421 CALCRP30988 508 aa7.19□□□□□ -1.26
CCL28-204ENST00000514421 NAA10P41227 235 aaPredicted RBP7.19□□□□□ -1.26
CCL28-204ENST00000514421 GDI2P50395 445 aaKnown RBP7.19□□□□□ -1.26
CCL28-204ENST00000514421 HCCSP53701 268 aa7.19□□□□□ -1.26
CCL28-204ENST00000514421 LSM6P62312 80 aaKnown RBP7.19□□□□□ -1.26
CCL28-204ENST00000514421 HGFACQ04756 655 aa7.19□□□□□ -1.26
CCL28-204ENST00000514421 SPOCK1Q08629 439 aa7.19□□□□□ -1.26
CCL28-204ENST00000514421 HNRNPA0Q13151 305 aaKnown RBP7.19□□□□□ -1.26
CCL28-204ENST00000514421 TESK1Q15569 626 aa7.19□□□□□ -1.26
CCL28-204ENST00000514421 KCNMB1Q16558 191 aa7.19□□□□□ -1.26
CCL28-204ENST00000514421 C11orf91Q3C1V1 193 aa7.19□□□□□ -1.26
CCL28-204ENST00000514421 TP53I3Q53FA7 332 aa7.19□□□□□ -1.26
CCL28-204ENST00000514421 YIF1BQ5BJH7 314 aa7.19□□□□□ -1.26
CCL28-204ENST00000514421 DNM1P34Q6PK57 102 aa7.19□□□□□ -1.26
CCL28-204ENST00000514421 METAP1DQ6UB28 335 aaPredicted RBP7.19□□□□□ -1.26
CCL28-204ENST00000514421 LYPD4Q6UWN0 246 aa7.19□□□□□ -1.26
CCL28-204ENST00000514421 NR2C2APQ86WQ0 139 aa7.19□□□□□ -1.26
CCL28-204ENST00000514421 LYSMD2Q8IV50 215 aa7.19□□□□□ -1.26
CCL28-204ENST00000514421 GLB1L2Q8IW92 636 aa7.19□□□□□ -1.26
CCL28-204ENST00000514421 LRRC75A-AS1Q8N1F1 130 aa7.19□□□□□ -1.26
CCL28-204ENST00000514421 MUC15Q8N387 334 aa7.19□□□□□ -1.26
CCL28-204ENST00000514421 ZNF454Q8N9F8 522 aa7.19□□□□□ -1.26
CCL28-204ENST00000514421 ZNF511Q8NB15 262 aa7.19□□□□□ -1.26
CCL28-204ENST00000514421 IGFBPL1Q8WX77 278 aa7.19□□□□□ -1.26
CCL28-204ENST00000514421 HTRA1Q92743 480 aa7.19□□□□□ -1.26
CCL28-204ENST00000514421 PPP1R14BQ96C90 147 aa7.19□□□□□ -1.26
CCL28-204ENST00000514421 FBXO17Q96EF6 278 aa7.19□□□□□ -1.26
CCL28-204ENST00000514421 COX4I2Q96KJ9 171 aa7.19□□□□□ -1.26
CCL28-204ENST00000514421 ATF6BQ99941 703 aa7.19□□□□□ -1.26
CCL28-204ENST00000514421 CXXC4Q9H2H0 198 aa7.19□□□□□ -1.26
CCL28-204ENST00000514421 PPIL3Q9H2H8 161 aaKnown RBP7.19□□□□□ -1.26
CCL28-204ENST00000514421 C1orf198Q9H425 327 aa7.19□□□□□ -1.26
CCL28-204ENST00000514421 RERGLQ9H628 205 aa7.19□□□□□ -1.26
CCL28-204ENST00000514421 NOX3Q9HBY0 568 aa7.19□□□□□ -1.26
CCL28-204ENST00000514421 POLE4Q9NR33 117 aa7.19□□□□□ -1.26
CCL28-204ENST00000514421 MRPL22Q9NWU5 206 aaKnown RBP7.19□□□□□ -1.26
CCL28-204ENST00000514421 MRM2Q9UI43 246 aaKnown RBP7.19□□□□□ -1.26
CCL28-204ENST00000514421 KLHDC2Q9Y2U9 406 aa7.19□□□□□ -1.26
CCL28-204ENST00000514421 CMAHPQ9Y471 501 aa7.19□□□□□ -1.26
CCL28-204ENST00000514421 TRBV5-5A0A0J9YX44 114 aa7.18□□□□□ -1.26
CCL28-204ENST00000514421 OVOL3O00110 214 aa7.18□□□□□ -1.26
CCL28-204ENST00000514421 ARL6IP5O75915 188 aa7.18□□□□□ -1.26
CCL28-204ENST00000514421 PAX1P15863 534 aa7.18□□□□□ -1.26
CCL28-204ENST00000514421 ZNF32P17041 273 aa7.18□□□□□ -1.26
CCL28-204ENST00000514421 CFPP27918 469 aa7.18□□□□□ -1.26
CCL28-204ENST00000514421 THBS2P35442 1172 aa7.18□□□□□ -1.26
CCL28-204ENST00000514421 GLRXP35754 106 aa7.18□□□□□ -1.26
CCL28-204ENST00000514421 SERPINF1P36955 418 aa7.18□□□□□ -1.26
CCL28-204ENST00000514421 CCR9P51686 369 aa7.18□□□□□ -1.26
CCL28-204ENST00000514421 NANOS3P60323 173 aaKnown RBP7.18□□□□□ -1.26
CCL28-204ENST00000514421 PPP3R1P63098 170 aa7.18□□□□□ -1.26
CCL28-204ENST00000514421 PSG4Q00888 419 aa7.18□□□□□ -1.26
CCL28-204ENST00000514421 GALK2Q01415 458 aa7.18□□□□□ -1.26
CCL28-204ENST00000514421 GLO1Q04760 184 aa7.18□□□□□ -1.26
CCL28-204ENST00000514421 INSL4Q14641 139 aa7.18□□□□□ -1.26
CCL28-204ENST00000514421 ZNF79Q15937 498 aa7.18□□□□□ -1.26
CCL28-204ENST00000514421 ACSM3Q53FZ2 586 aa7.18□□□□□ -1.26
CCL28-204ENST00000514421 ZMAT1Q5H9K5 638 aa7.18□□□□□ -1.26
CCL28-204ENST00000514421 PABPC1L2AQ5JQF8 200 aa7.18□□□□□ -1.26
CCL28-204ENST00000514421 DDI2Q5TDH0 399 aa7.18□□□□□ -1.26
CCL28-204ENST00000514421 DEGS2Q6QHC5 323 aa7.18□□□□□ -1.26
CCL28-204ENST00000514421 ARL9Q6T311 187 aa7.18□□□□□ -1.26
CCL28-204ENST00000514421 RHOUQ7L0Q8 258 aa7.18□□□□□ -1.26
CCL28-204ENST00000514421 DTX2Q86UW9 622 aa7.18□□□□□ -1.26
CCL28-204ENST00000514421 MYPOPQ86VE0 399 aaPredicted RBP7.18□□□□□ -1.26
CCL28-204ENST00000514421 ZNF584Q8IVC4 421 aa7.18□□□□□ -1.26
CCL28-204ENST00000514421 LAX1Q8IWV1 398 aa7.18□□□□□ -1.26
CCL28-204ENST00000514421 CENPSQ8N2Z9 138 aa7.18□□□□□ -1.26
CCL28-204ENST00000514421 CPEB3Q8NE35 698 aaKnown RBP7.18□□□□□ -1.26
CCL28-204ENST00000514421 SLC30A7Q8NEW0 376 aa7.18□□□□□ -1.26
CCL28-204ENST00000514421 NUP37Q8NFH4 326 aa7.18□□□□□ -1.26
CCL28-204ENST00000514421 SLC26A10Q8NG04 563 aa7.18□□□□□ -1.26
CCL28-204ENST00000514421 THRSPQ92748 146 aa7.18□□□□□ -1.26
CCL28-204ENST00000514421 OR8B4Q96RC9 309 aa7.18□□□□□ -1.26
CCL28-204ENST00000514421 TRAF4Q9BUZ4 470 aaPredicted RBP7.18□□□□□ -1.26
CCL28-204ENST00000514421 ZNF416Q9BWM5 594 aa7.18□□□□□ -1.26
CCL28-204ENST00000514421 OR2H1Q9GZK4 316 aa7.18□□□□□ -1.26
CCL28-204ENST00000514421 SP140LQ9H930 580 aa7.18□□□□□ -1.26
CCL28-204ENST00000514421 EMC7Q9NPA0 242 aa7.18□□□□□ -1.26
CCL28-204ENST00000514421 CA10Q9NS85 328 aa7.18□□□□□ -1.26
CCL28-204ENST00000514421 CBLN4Q9NTU7 201 aa7.18□□□□□ -1.26
CCL28-204ENST00000514421 ACOXLQ9NUZ1 547 aa7.18□□□□□ -1.26
CCL28-204ENST00000514421 ZNF701Q9NV72 531 aaPredicted RBP7.18□□□□□ -1.26
CCL28-204ENST00000514421 GNG8Q9UK08 70 aa7.18□□□□□ -1.26
CCL28-204ENST00000514421 ZNF281Q9Y2X9 895 aa7.18□□□□□ -1.26
CCL28-204ENST00000514421 MAP1AP78559 2803 aaPredicted RBP7.18□□□□□ -1.26
CCL28-204ENST00000514421 CSMD1Q96PZ7 3565 aa7.17□□□□□ -1.26
CCL28-204ENST00000514421 HRNRQ86YZ3 2850 aaPredicted RBP7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms