RNA–Protein interactions for RNA: ENST00000513960.5

VCAN-210, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 3,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-210ENST00000513960 TRBV5-5A0A0J9YX44 114 aa8.62□□□□□ -1.03
VCAN-210ENST00000513960 TMEM269A0A1B0GVZ9 245 aa8.62□□□□□ -1.03
VCAN-210ENST00000513960 A0A1W2PPC4 97 aa8.62□□□□□ -1.03
VCAN-210ENST00000513960 C17orf105B2RV13 164 aa8.62□□□□□ -1.03
VCAN-210ENST00000513960 NPIPB9F8W1W9 429 aa8.62□□□□□ -1.03
VCAN-210ENST00000513960 CD74P04233 296 aa8.62□□□□□ -1.03
VCAN-210ENST00000513960 HCKP08631 526 aa8.62□□□□□ -1.03
VCAN-210ENST00000513960 CCINQ13939 588 aa8.62□□□□□ -1.03
VCAN-210ENST00000513960 SLC17A1Q14916 467 aa8.62□□□□□ -1.03
VCAN-210ENST00000513960 IAH1Q2TAA2 248 aaPredicted RBP8.62□□□□□ -1.03
VCAN-210ENST00000513960 WBP2NLQ6ICG8 309 aa8.62□□□□□ -1.03
VCAN-210ENST00000513960 Q6ZS52 159 aa8.62□□□□□ -1.03
VCAN-210ENST00000513960 HIST2H3AQ71DI3 136 aa8.62□□□□□ -1.03
VCAN-210ENST00000513960 MED25Q71SY5 747 aa8.62□□□□□ -1.03
VCAN-210ENST00000513960 ASB13Q8WXK3 278 aa8.62□□□□□ -1.03
VCAN-210ENST00000513960 KTI12Q96EK9 354 aaPredicted RBP8.62□□□□□ -1.03
VCAN-210ENST00000513960 TGM7Q96PF1 710 aa8.62□□□□□ -1.03
VCAN-210ENST00000513960 CDC6Q99741 560 aa8.62□□□□□ -1.03
VCAN-210ENST00000513960 SSX3Q99909 188 aa8.62□□□□□ -1.03
VCAN-210ENST00000513960 MFRPQ9BY79 579 aa8.62□□□□□ -1.03
VCAN-210ENST00000513960 PDE7BQ9NP56 450 aa8.62□□□□□ -1.03
VCAN-210ENST00000513960 UBQLN4Q9NRR5 601 aa8.62□□□□□ -1.03
VCAN-210ENST00000513960 RTTNQ86VV8 2226 aa8.62□□□□□ -1.03
VCAN-210ENST00000513960 AP4M1O00189 453 aa8.62□□□□□ -1.03
VCAN-210ENST00000513960 ARPC3O15145 178 aa8.62□□□□□ -1.03
VCAN-210ENST00000513960 MPZL1O95297 269 aa8.62□□□□□ -1.03
VCAN-210ENST00000513960 PNPP00491 289 aa8.62□□□□□ -1.03
VCAN-210ENST00000513960 JMJD7P0C870 316 aa8.62□□□□□ -1.03
VCAN-210ENST00000513960 PET100P0DJ07 73 aa8.62□□□□□ -1.03
VCAN-210ENST00000513960 PNMTP11086 282 aa8.62□□□□□ -1.03
VCAN-210ENST00000513960 ZNF20P17024 532 aa8.62□□□□□ -1.03
VCAN-210ENST00000513960 CSNK2A1P68400 391 aaPredicted RBP8.62□□□□□ -1.03
VCAN-210ENST00000513960 FHL1Q13642 323 aa8.62□□□□□ -1.03
VCAN-210ENST00000513960 C4orf17Q53FE4 359 aa8.62□□□□□ -1.03
VCAN-210ENST00000513960 KLHL24Q6TFL4 600 aa8.62□□□□□ -1.03
VCAN-210ENST00000513960 GKN2Q86XP6 184 aa8.62□□□□□ -1.03
VCAN-210ENST00000513960 CSNK2A3Q8NEV1 391 aa8.62□□□□□ -1.03
VCAN-210ENST00000513960 RNASE11Q8TAA1 199 aaKnown RBP8.62□□□□□ -1.03
VCAN-210ENST00000513960 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.61□□□□□ -1.03
VCAN-210ENST00000513960 A0A1B0GTI1 187 aa8.61□□□□□ -1.03
VCAN-210ENST00000513960 TNFSF12O43508 249 aa8.61□□□□□ -1.03
VCAN-210ENST00000513960 OR2C1O95371 312 aa8.61□□□□□ -1.03
VCAN-210ENST00000513960 H2BFMP0C1H6 154 aa8.61□□□□□ -1.03
VCAN-210ENST00000513960 CAPZBP47756 277 aa8.61□□□□□ -1.03
VCAN-210ENST00000513960 GSK3AP49840 483 aa8.61□□□□□ -1.03
VCAN-210ENST00000513960 ASCL1P50553 236 aa8.61□□□□□ -1.03
VCAN-210ENST00000513960 FUT7Q11130 342 aa8.61□□□□□ -1.03
VCAN-210ENST00000513960 SSX2Q16385 188 aa8.61□□□□□ -1.03
VCAN-210ENST00000513960 MESTQ5EB52 335 aa8.61□□□□□ -1.03
VCAN-210ENST00000513960 CBLN3Q6UW01 205 aa8.61□□□□□ -1.03
VCAN-210ENST00000513960 P4HA3Q7Z4N8 544 aa8.61□□□□□ -1.03
VCAN-210ENST00000513960 DEFB119Q8N690 84 aa8.61□□□□□ -1.03
VCAN-210ENST00000513960 OR4D6Q8NGJ1 314 aa8.61□□□□□ -1.03
VCAN-210ENST00000513960 TSPAN32Q96QS1 320 aa8.61□□□□□ -1.03
VCAN-210ENST00000513960 S100A13Q99584 98 aa8.61□□□□□ -1.03
VCAN-210ENST00000513960 TPSD1Q9BZJ3 242 aa8.61□□□□□ -1.03
VCAN-210ENST00000513960 OR8D2Q9GZM6 311 aa8.61□□□□□ -1.03
VCAN-210ENST00000513960 SLCO5A1Q9H2Y9 848 aa8.61□□□□□ -1.03
VCAN-210ENST00000513960 TMPRSS5Q9H3S3 457 aa8.61□□□□□ -1.03
VCAN-210ENST00000513960 SEC16AO15027 2179 aa8.61□□□□□ -1.03
VCAN-210ENST00000513960 TMEM150CB9EJG8 249 aa8.61□□□□□ -1.03
VCAN-210ENST00000513960 SERPINA2P20848 420 aa8.61□□□□□ -1.03
VCAN-210ENST00000513960 FCGR2CP31995 323 aa8.61□□□□□ -1.03
VCAN-210ENST00000513960 ARL4DP49703 201 aa8.61□□□□□ -1.03
VCAN-210ENST00000513960 IGLV3-21P80748 117 aaPredicted RBP8.61□□□□□ -1.03
VCAN-210ENST00000513960 C1QL3Q5VWW1 255 aa8.61□□□□□ -1.03
VCAN-210ENST00000513960 OR2A2Q6IF42 318 aa8.61□□□□□ -1.03
VCAN-210ENST00000513960 CDC20BQ86Y33 519 aa8.61□□□□□ -1.03
VCAN-210ENST00000513960 FAM160A2Q8N612 972 aaPredicted RBP8.61□□□□□ -1.03
VCAN-210ENST00000513960 PNLDC1Q8NA58 520 aaKnown RBP8.61□□□□□ -1.03
VCAN-210ENST00000513960 FAM213BQ8TBF2 198 aa8.61□□□□□ -1.03
VCAN-210ENST00000513960 EDEM2Q9BV94 578 aa8.61□□□□□ -1.03
VCAN-210ENST00000513960 CCDC163A0A0D9SF12 145 aa8.61□□□□□ -1.03
VCAN-210ENST00000513960 CXorf65A6NEN9 183 aa8.61□□□□□ -1.03
VCAN-210ENST00000513960 C5orf52A6NGY3 159 aa8.61□□□□□ -1.03
VCAN-210ENST00000513960 C9JQL5 133 aa8.61□□□□□ -1.03
VCAN-210ENST00000513960 C1QL1O75973 258 aa8.61□□□□□ -1.03
VCAN-210ENST00000513960 SLC2A1P11166 492 aa8.61□□□□□ -1.03
VCAN-210ENST00000513960 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.61□□□□□ -1.03
VCAN-210ENST00000513960 TSTD1Q8NFU3 115 aa8.61□□□□□ -1.03
VCAN-210ENST00000513960 TOMM40LQ969M1 308 aa8.61□□□□□ -1.03
VCAN-210ENST00000513960 C5orf34Q96MH7 638 aa8.61□□□□□ -1.03
VCAN-210ENST00000513960 ADOQ96SZ5 270 aa8.61□□□□□ -1.03
VCAN-210ENST00000513960 CNTNAP3Q9BZ76 1288 aa8.61□□□□□ -1.03
VCAN-210ENST00000513960 EHFQ9NZC4 300 aa8.61□□□□□ -1.03
VCAN-210ENST00000513960 C14orf166Q9Y224 244 aaKnown RBP8.61□□□□□ -1.03
VCAN-210ENST00000513960 C2CD4DB7Z1M9 353 aa8.6□□□□□ -1.03
VCAN-210ENST00000513960 H0YIZ8 118 aa8.6□□□□□ -1.03
VCAN-210ENST00000513960 CRTAPO75718 401 aaPredicted RBP8.6□□□□□ -1.03
VCAN-210ENST00000513960 DUS4LO95620 317 aaKnown RBP8.6□□□□□ -1.03
VCAN-210ENST00000513960 ARRB1P49407 418 aaPredicted RBP8.6□□□□□ -1.03
VCAN-210ENST00000513960 TAS2R31P59538 309 aa8.6□□□□□ -1.03
VCAN-210ENST00000513960 RSU1Q15404 277 aa8.6□□□□□ -1.03
VCAN-210ENST00000513960 GUK1Q16774 197 aa8.6□□□□□ -1.03
VCAN-210ENST00000513960 RTN4RL2Q86UN3 420 aa8.6□□□□□ -1.03
VCAN-210ENST00000513960 ARHGEF39Q8N4T4 335 aa8.6□□□□□ -1.03
VCAN-210ENST00000513960 OR2I1PQ8NGU4 316 aa8.6□□□□□ -1.03
VCAN-210ENST00000513960 GGACTQ9BVM4 153 aa8.6□□□□□ -1.03
VCAN-210ENST00000513960 SLC2A4RGQ9NR83 387 aa8.6□□□□□ -1.03
VCAN-210ENST00000513960 XRCC2O43543 280 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms