RNA–Protein interactions for RNA: ENST00000513450.1

RNF4-219, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 416 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-219ENST00000513450 CDC40O60508 579 aaKnown RBP eCLIP1.33□□□□□ -2.2
RNF4-219ENST00000513450 GCM2O75603 506 aaPredicted RBP1.33□□□□□ -2.2
RNF4-219ENST00000513450 FCN3O75636 299 aa1.33□□□□□ -2.2
RNF4-219ENST00000513450 AQP8O94778 261 aa1.33□□□□□ -2.2
RNF4-219ENST00000513450 LCA5LO95447 670 aa1.33□□□□□ -2.2
RNF4-219ENST00000513450 ARG1P05089 322 aa1.33□□□□□ -2.2
RNF4-219ENST00000513450 TPM3P06753 285 aa1.33□□□□□ -2.2
RNF4-219ENST00000513450 CTSLP07711 333 aa1.33□□□□□ -2.2
RNF4-219ENST00000513450 ADRA2AP08913 450 aa1.33□□□□□ -2.2
RNF4-219ENST00000513450 OR56A5P0C7T3 313 aa1.33□□□□□ -2.2
RNF4-219ENST00000513450 ERGP11308 486 aa1.33□□□□□ -2.2
RNF4-219ENST00000513450 ATF6P18850 670 aa1.33□□□□□ -2.2
RNF4-219ENST00000513450 GGT1P19440 569 aa1.33□□□□□ -2.2
RNF4-219ENST00000513450 BCKDHBP21953 392 aa1.33□□□□□ -2.2
RNF4-219ENST00000513450 NPY1RP25929 384 aa1.33□□□□□ -2.2
RNF4-219ENST00000513450 IL12BP29460 328 aa1.33□□□□□ -2.2
RNF4-219ENST00000513450 HCAR3P49019 387 aa1.33□□□□□ -2.2
RNF4-219ENST00000513450 OR2B6P58173 313 aa1.33□□□□□ -2.2
RNF4-219ENST00000513450 UBE2G2P60604 165 aa1.33□□□□□ -2.2
RNF4-219ENST00000513450 ATP6V0D1P61421 351 aa1.33□□□□□ -2.2
RNF4-219ENST00000513450 PSMC5P62195 406 aa1.33□□□□□ -2.2
RNF4-219ENST00000513450 RPS15AP62244 130 aaKnown RBP1.33□□□□□ -2.2
RNF4-219ENST00000513450 UBE2IP63279 158 aaKnown RBP1.33□□□□□ -2.2
RNF4-219ENST00000513450 PRR3P79522 188 aaKnown RBP1.33□□□□□ -2.2
RNF4-219ENST00000513450 SLAMF1Q13291 335 aa1.33□□□□□ -2.2
RNF4-219ENST00000513450 PMS2P3Q13401 168 aa1.33□□□□□ -2.2
RNF4-219ENST00000513450 MOBPQ13875 183 aa1.33□□□□□ -2.2
RNF4-219ENST00000513450 PIGHQ14442 188 aaPredicted RBP1.33□□□□□ -2.2
RNF4-219ENST00000513450 KIR2DS1Q14954 304 aa1.33□□□□□ -2.2
RNF4-219ENST00000513450 TRAM2Q15035 370 aa1.33□□□□□ -2.2
RNF4-219ENST00000513450 NCF4Q15080 339 aa1.33□□□□□ -2.2
RNF4-219ENST00000513450 SHHQ15465 462 aa1.33□□□□□ -2.2
RNF4-219ENST00000513450 TSC22D1Q15714 1073 aa1.33□□□□□ -2.2
RNF4-219ENST00000513450 PSMD5Q16401 504 aa1.33□□□□□ -2.2
RNF4-219ENST00000513450 GABRA6Q16445 453 aa1.33□□□□□ -2.2
RNF4-219ENST00000513450 SMUG1Q53HV7 270 aa1.33□□□□□ -2.2
RNF4-219ENST00000513450 XKR4Q5GH76 650 aa1.33□□□□□ -2.2
RNF4-219ENST00000513450 ZNF684Q5T5D7 378 aa1.33□□□□□ -2.2
RNF4-219ENST00000513450 GPR107Q5VW38 600 aa1.33□□□□□ -2.2
RNF4-219ENST00000513450 ADNP2Q6IQ32 1131 aa1.33□□□□□ -2.2
RNF4-219ENST00000513450 H3F3CQ6NXT2 135 aa1.33□□□□□ -2.2
RNF4-219ENST00000513450 PRMT9Q6P2P2 845 aa1.33□□□□□ -2.2
RNF4-219ENST00000513450 SPESP1Q6UW49 350 aa1.33□□□□□ -2.2
RNF4-219ENST00000513450 ST13P4Q8IZP2 240 aaPredicted RBP1.33□□□□□ -2.2
RNF4-219ENST00000513450 ZNF561Q8N587 486 aa1.33□□□□□ -2.2
RNF4-219ENST00000513450 NPWQ8N729 165 aa1.33□□□□□ -2.2
RNF4-219ENST00000513450 GATSQ8NAP1 163 aa1.33□□□□□ -2.2
RNF4-219ENST00000513450 CHST4Q8NCG5 386 aa1.33□□□□□ -2.2
RNF4-219ENST00000513450 OR5T3Q8NGG3 340 aa1.33□□□□□ -2.2
RNF4-219ENST00000513450 LYPD6BQ8NI32 183 aa1.33□□□□□ -2.2
RNF4-219ENST00000513450 ZNF461Q8TAF7 563 aa1.33□□□□□ -2.2
RNF4-219ENST00000513450 PIFOQ8TCI5 191 aa1.33□□□□□ -2.2
RNF4-219ENST00000513450 CA5BP1Q8WTZ4 195 aa1.33□□□□□ -2.2
RNF4-219ENST00000513450 CAPSLQ8WWF8 208 aa1.33□□□□□ -2.2
RNF4-219ENST00000513450 ANP32BQ92688 251 aaKnown RBP1.33□□□□□ -2.2
RNF4-219ENST00000513450 NAT6Q93015 286 aa1.33□□□□□ -2.2
RNF4-219ENST00000513450 EEF1AKMT3Q96AZ1 226 aa1.33□□□□□ -2.2
RNF4-219ENST00000513450 TRNT1Q96Q11 434 aaKnown RBP1.33□□□□□ -2.2
RNF4-219ENST00000513450 XPO6Q96QU8 1125 aaKnown RBP1.33□□□□□ -2.2
RNF4-219ENST00000513450 TIMM17AQ99595 171 aa1.33□□□□□ -2.2
RNF4-219ENST00000513450 SCRT1Q9BWW7 348 aa1.33□□□□□ -2.2
RNF4-219ENST00000513450 MAP1LC3CQ9BXW4 147 aa1.33□□□□□ -2.2
RNF4-219ENST00000513450 TM6SF2Q9BZW4 377 aa1.33□□□□□ -2.2
RNF4-219ENST00000513450 UCK2Q9BZX2 261 aa1.33□□□□□ -2.2
RNF4-219ENST00000513450 OR52A5Q9H2C5 316 aa1.33□□□□□ -2.2
RNF4-219ENST00000513450 SPNS1Q9H2V7 528 aa1.33□□□□□ -2.2
RNF4-219ENST00000513450 GOLPH3Q9H4A6 298 aa1.33□□□□□ -2.2
RNF4-219ENST00000513450 BEX1Q9HBH7 125 aa1.33□□□□□ -2.2
RNF4-219ENST00000513450 RETNQ9HD89 108 aa1.33□□□□□ -2.2
RNF4-219ENST00000513450 CLN8Q9UBY8 286 aa1.33□□□□□ -2.2
RNF4-219ENST00000513450 ZNF282Q9UDV7 671 aaPredicted RBP1.33□□□□□ -2.2
RNF4-219ENST00000513450 MRM2Q9UI43 246 aaKnown RBP1.33□□□□□ -2.2
RNF4-219ENST00000513450 SLC17A4Q9Y2C5 497 aa1.33□□□□□ -2.2
RNF4-219ENST00000513450 GAKO14976 1311 aa1.33□□□□□ -2.2
RNF4-219ENST00000513450 ADCY9O60503 1353 aa1.33□□□□□ -2.2
RNF4-219ENST00000513450 FHOD3Q2V2M9 1422 aa1.32□□□□□ -2.2
RNF4-219ENST00000513450 IGLV2-18A0A075B6J9 118 aa1.32□□□□□ -2.2
RNF4-219ENST00000513450 IGHV1OR15-9A0A0B4J2B8 117 aa1.32□□□□□ -2.2
RNF4-219ENST00000513450 IGKV6-21A0A0C4DH24 114 aa1.32□□□□□ -2.2
RNF4-219ENST00000513450 A0A1B0GW15 77 aa1.32□□□□□ -2.2
RNF4-219ENST00000513450 A0A1W2PQ67 120 aa1.32□□□□□ -2.2
RNF4-219ENST00000513450 GSTTP1A0A1W2PQM5 241 aa1.32□□□□□ -2.2
RNF4-219ENST00000513450 TMEM120BA0PK00 339 aa1.32□□□□□ -2.2
RNF4-219ENST00000513450 C7orf66A4D0T2 115 aa1.32□□□□□ -2.2
RNF4-219ENST00000513450 F8VZ95 297 aa1.32□□□□□ -2.2
RNF4-219ENST00000513450 GOLGA8RI6L899 631 aa1.32□□□□□ -2.2
RNF4-219ENST00000513450 DNASE2O00115 360 aaPredicted RBP1.32□□□□□ -2.2
RNF4-219ENST00000513450 CALUO43852 315 aaPredicted RBP1.32□□□□□ -2.2
RNF4-219ENST00000513450 RDH16O75452 317 aa1.32□□□□□ -2.2
RNF4-219ENST00000513450 ADAP1O75689 374 aa1.32□□□□□ -2.2
RNF4-219ENST00000513450 SC5DO75845 299 aa1.32□□□□□ -2.2
RNF4-219ENST00000513450 RBBP9O75884 186 aa1.32□□□□□ -2.2
RNF4-219ENST00000513450 SEMA3DO95025 777 aa1.32□□□□□ -2.2
RNF4-219ENST00000513450 RCBTB2O95199 551 aa1.32□□□□□ -2.2
RNF4-219ENST00000513450 CD160O95971 181 aa1.32□□□□□ -2.2
RNF4-219ENST00000513450 HLA-DQA1P01909 254 aa1.32□□□□□ -2.2
RNF4-219ENST00000513450 APCSP02743 223 aa1.32□□□□□ -2.2
RNF4-219ENST00000513450 IFNW1P05000 195 aa1.32□□□□□ -2.2
RNF4-219ENST00000513450 LINC00869P0C866 280 aa1.32□□□□□ -2.2
RNF4-219ENST00000513450 RD3LP0DJH9 198 aa1.32□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms