RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 MEGF10Q96KG7 1140 aa10.17□□□□□ -0.78
TCOF1-211ENST00000513346 BANF2Q9H503 90 aa10.17□□□□□ -0.78
TCOF1-211ENST00000513346 PLEK2Q9NYT0 353 aa10.17□□□□□ -0.78
TCOF1-211ENST00000513346 DNAJB11Q9UBS4 358 aa10.17□□□□□ -0.78
TCOF1-211ENST00000513346 LPAR3Q9UBY5 353 aa10.17□□□□□ -0.78
TCOF1-211ENST00000513346 NEU3Q9UQ49 428 aa10.17□□□□□ -0.78
TCOF1-211ENST00000513346 PTPRFP10586 1907 aa10.17□□□□□ -0.78
TCOF1-211ENST00000513346 SLC35E2P0CK97 266 aa10.16□□□□□ -0.78
TCOF1-211ENST00000513346 RPS27P42677 84 aaKnown RBP10.16□□□□□ -0.78
TCOF1-211ENST00000513346 ZNF85Q03923 595 aa10.16□□□□□ -0.78
TCOF1-211ENST00000513346 SLC17A1Q14916 467 aa10.16□□□□□ -0.78
TCOF1-211ENST00000513346 PRSS54Q6PEW0 395 aa10.16□□□□□ -0.78
TCOF1-211ENST00000513346 TFAP2EQ6VUC0 442 aa10.16□□□□□ -0.78
TCOF1-211ENST00000513346 CPEB2Q7Z5Q1 589 aaKnown RBP10.16□□□□□ -0.78
TCOF1-211ENST00000513346 BAGE3Q86Y29 109 aa10.16□□□□□ -0.78
TCOF1-211ENST00000513346 BAGE2Q86Y30 109 aa10.16□□□□□ -0.78
TCOF1-211ENST00000513346 PATE1Q8WXA2 126 aa10.16□□□□□ -0.78
TCOF1-211ENST00000513346 RSC1A1Q92681 617 aa10.16□□□□□ -0.78
TCOF1-211ENST00000513346 CCDC74AQ96AQ1 378 aa10.16□□□□□ -0.78
TCOF1-211ENST00000513346 SIGLEC11Q96RL6 698 aa10.16□□□□□ -0.78
TCOF1-211ENST00000513346 RAB18Q9NP72 206 aa10.16□□□□□ -0.78
TCOF1-211ENST00000513346 ELOA3CA0A087WX78 387 aaPredicted RBP10.16□□□□□ -0.78
TCOF1-211ENST00000513346 ZNF727A8MUV8 499 aa10.16□□□□□ -0.78
TCOF1-211ENST00000513346 SDCBPO00560 298 aaPredicted RBP10.16□□□□□ -0.78
TCOF1-211ENST00000513346 EIF3GO75821 320 aaKnown RBP eCLIP10.16□□□□□ -0.78
TCOF1-211ENST00000513346 DUS4LO95620 317 aaKnown RBP10.16□□□□□ -0.78
TCOF1-211ENST00000513346 ARG1P05089 322 aa10.16□□□□□ -0.78
TCOF1-211ENST00000513346 QDPRP09417 244 aa10.16□□□□□ -0.78
TCOF1-211ENST00000513346 FCGR2AP12318 317 aa10.16□□□□□ -0.78
TCOF1-211ENST00000513346 GNB3P16520 340 aa10.16□□□□□ -0.78
TCOF1-211ENST00000513346 GSK3AP49840 483 aa10.16□□□□□ -0.78
TCOF1-211ENST00000513346 RBP2P50120 134 aa10.16□□□□□ -0.78
TCOF1-211ENST00000513346 HBG1P69891 147 aa10.16□□□□□ -0.78
TCOF1-211ENST00000513346 HBG2P69892 147 aa10.16□□□□□ -0.78
TCOF1-211ENST00000513346 COTL1Q14019 142 aa10.16□□□□□ -0.78
TCOF1-211ENST00000513346 SMAD2Q15796 467 aaKnown RBP10.16□□□□□ -0.78
TCOF1-211ENST00000513346 PABPC1L2AQ5JQF8 200 aa10.16□□□□□ -0.78
TCOF1-211ENST00000513346 OR2B11Q5JQS5 317 aa10.16□□□□□ -0.78
TCOF1-211ENST00000513346 CST9LP1Q5W188 147 aa10.16□□□□□ -0.78
TCOF1-211ENST00000513346 FAM57BQ71RH2 274 aa10.16□□□□□ -0.78
TCOF1-211ENST00000513346 ARRDC1Q8N5I2 433 aa10.16□□□□□ -0.78
TCOF1-211ENST00000513346 SEH1LQ96EE3 360 aa10.16□□□□□ -0.78
TCOF1-211ENST00000513346 ARSGQ96EG1 525 aa10.16□□□□□ -0.78
TCOF1-211ENST00000513346 GNG13Q9P2W3 67 aa10.16□□□□□ -0.78
TCOF1-211ENST00000513346 BOKQ9UMX3 212 aaPredicted RBP10.16□□□□□ -0.78
TCOF1-211ENST00000513346 SF3B6Q9Y3B4 125 aaKnown RBP10.16□□□□□ -0.78
TCOF1-211ENST00000513346 OR51B4Q9Y5P0 310 aa10.16□□□□□ -0.78
TCOF1-211ENST00000513346 V9GYS6 101 aa10.16□□□□□ -0.78
TCOF1-211ENST00000513346 CD79AP11912 226 aa10.16□□□□□ -0.78
TCOF1-211ENST00000513346 NKX2-1P43699 371 aaPredicted RBP10.16□□□□□ -0.78
TCOF1-211ENST00000513346 COL19A1Q14993 1142 aa10.16□□□□□ -0.78
TCOF1-211ENST00000513346 PHLDA2Q53GA4 152 aa10.16□□□□□ -0.78
TCOF1-211ENST00000513346 LILRA6Q6PI73 481 aa10.16□□□□□ -0.78
TCOF1-211ENST00000513346 DCXRQ7Z4W1 244 aa10.16□□□□□ -0.78
TCOF1-211ENST00000513346 WDR5BQ86VZ2 330 aa10.16□□□□□ -0.78
TCOF1-211ENST00000513346 LDLRAD3Q86YD5 345 aa10.16□□□□□ -0.78
TCOF1-211ENST00000513346 TMEM123Q8N131 208 aa10.16□□□□□ -0.78
TCOF1-211ENST00000513346 SUMF1Q8NBK3 374 aa10.16□□□□□ -0.78
TCOF1-211ENST00000513346 SGCZQ96LD1 299 aa10.16□□□□□ -0.78
TCOF1-211ENST00000513346 TMEM100Q9NV29 134 aa10.16□□□□□ -0.78
TCOF1-211ENST00000513346 MMACHCQ9Y4U1 282 aa10.16□□□□□ -0.78
TCOF1-211ENST00000513346 A8MXK9 166 aa10.16□□□□□ -0.78
TCOF1-211ENST00000513346 CDC42EP2O14613 210 aa10.16□□□□□ -0.78
TCOF1-211ENST00000513346 HCRTR1O43613 425 aa10.16□□□□□ -0.78
TCOF1-211ENST00000513346 F12P00748 615 aaPredicted RBP10.16□□□□□ -0.78
TCOF1-211ENST00000513346 POLR2GP62487 172 aaKnown RBP eCLIP10.16□□□□□ -0.78
TCOF1-211ENST00000513346 PPP2CBP62714 309 aa10.16□□□□□ -0.78
TCOF1-211ENST00000513346 PPP2CAP67775 309 aa10.16□□□□□ -0.78
TCOF1-211ENST00000513346 CNN3Q15417 329 aaKnown RBP10.16□□□□□ -0.78
TCOF1-211ENST00000513346 PRAMEF20Q5VT98 475 aa10.16□□□□□ -0.78
TCOF1-211ENST00000513346 ZNF429Q86V71 674 aa10.16□□□□□ -0.78
TCOF1-211ENST00000513346 ZFP62Q8NB50 900 aaPredicted RBP10.16□□□□□ -0.78
TCOF1-211ENST00000513346 LCORQ96JN0 433 aaPredicted RBP10.16□□□□□ -0.78
TCOF1-211ENST00000513346 NXF5Q9H1B4 397 aaKnown RBP10.16□□□□□ -0.78
TCOF1-211ENST00000513346 C20orf141Q9NUB4 165 aa10.16□□□□□ -0.78
TCOF1-211ENST00000513346 HAO2Q9NYQ3 351 aa10.16□□□□□ -0.78
TCOF1-211ENST00000513346 SLC23A2Q9UGH3 650 aa10.16□□□□□ -0.78
TCOF1-211ENST00000513346 TIMM8BQ9Y5J9 83 aaPredicted RBP10.16□□□□□ -0.78
TCOF1-211ENST00000513346 A0A1W2PPV4 95 aa10.15□□□□□ -0.78
TCOF1-211ENST00000513346 MFNGO00587 321 aa10.15□□□□□ -0.78
TCOF1-211ENST00000513346 CD46P15529 392 aa10.15□□□□□ -0.78
TCOF1-211ENST00000513346 ADRA2CP18825 462 aa10.15□□□□□ -0.78
TCOF1-211ENST00000513346 PSMB3P49720 205 aa10.15□□□□□ -0.78
TCOF1-211ENST00000513346 METAP1P53582 386 aa10.15□□□□□ -0.78
TCOF1-211ENST00000513346 CD81P60033 236 aa10.15□□□□□ -0.78
TCOF1-211ENST00000513346 SLC35A1P78382 337 aa10.15□□□□□ -0.78
TCOF1-211ENST00000513346 TGFBR3Q03167 851 aa10.15□□□□□ -0.78
TCOF1-211ENST00000513346 TESK1Q15569 626 aa10.15□□□□□ -0.78
TCOF1-211ENST00000513346 ZNF600Q6ZNG1 722 aa10.15□□□□□ -0.78
TCOF1-211ENST00000513346 POC1BQ8TC44 478 aa10.15□□□□□ -0.78
TCOF1-211ENST00000513346 ZG16BQ96DA0 208 aa10.15□□□□□ -0.78
TCOF1-211ENST00000513346 PCED1AQ9H1Q7 454 aa10.15□□□□□ -0.78
TCOF1-211ENST00000513346 NECAP2Q9NVZ3 263 aa10.15□□□□□ -0.78
TCOF1-211ENST00000513346 TNFSF18Q9UNG2 199 aa10.15□□□□□ -0.78
TCOF1-211ENST00000513346 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.15□□□□□ -0.78
TCOF1-211ENST00000513346 CD96P40200 585 aa10.15□□□□□ -0.78
TCOF1-211ENST00000513346 HAAOP46952 286 aa10.15□□□□□ -0.78
TCOF1-211ENST00000513346 PKIAP61925 76 aa10.15□□□□□ -0.78
TCOF1-211ENST00000513346 DBX2Q6ZNG2 339 aa10.15□□□□□ -0.78
TCOF1-211ENST00000513346 SLC46A1Q96NT5 459 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms