RNA–Protein interactions for RNA: ENST00000512107.5

MATR3-238, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-238	ENST00000512107		H0YL77	283 aa		12.42	□□□□□ -0.42
MATR3-238	ENST00000512107	OGG1	O15527	345 aa		12.42	□□□□□ -0.42
MATR3-238	ENST00000512107	ATE1	O95260	518 aa		12.42	□□□□□ -0.42
MATR3-238	ENST00000512107	IGHV3-13	P01766	116 aa		12.42	□□□□□ -0.42
MATR3-238	ENST00000512107	NAT2	P11245	290 aa		12.42	□□□□□ -0.42
MATR3-238	ENST00000512107	CDKN1A	P38936	164 aa		12.42	□□□□□ -0.42
MATR3-238	ENST00000512107	MMP15	P51511	669 aa		12.42	□□□□□ -0.42
MATR3-238	ENST00000512107	GABARAPL2	P60520	117 aa		12.42	□□□□□ -0.42
MATR3-238	ENST00000512107	ALKBH1	Q13686	389 aa	Known RBP	12.42	□□□□□ -0.42
MATR3-238	ENST00000512107	ZNF829	Q3KNS6	432 aa	Predicted RBP	12.42	□□□□□ -0.42
MATR3-238	ENST00000512107	ZNF718	Q3SXZ3	478 aa		12.42	□□□□□ -0.42
MATR3-238	ENST00000512107	ZNF544	Q6NX49	715 aa		12.42	□□□□□ -0.42
MATR3-238	ENST00000512107	PRSS48	Q7RTY5	328 aa		12.42	□□□□□ -0.42
MATR3-238	ENST00000512107	SPART	Q8N0X7	666 aa		12.42	□□□□□ -0.42
MATR3-238	ENST00000512107	OR51A4	Q8NGJ6	313 aa		12.42	□□□□□ -0.42
MATR3-238	ENST00000512107	OR13C5	Q8NGS8	318 aa		12.42	□□□□□ -0.42
MATR3-238	ENST00000512107	DVL3	Q92997	716 aa	Predicted RBP	12.42	□□□□□ -0.42
MATR3-238	ENST00000512107	LURAP1	Q96LR2	239 aa		12.42	□□□□□ -0.42
MATR3-238	ENST00000512107	CCDC90B	Q9GZT6	254 aa		12.42	□□□□□ -0.42
MATR3-238	ENST00000512107	GPR84	Q9NQS5	396 aa		12.42	□□□□□ -0.42
MATR3-238	ENST00000512107	BABAM2	Q9NXR7	383 aa		12.42	□□□□□ -0.42
MATR3-238	ENST00000512107	TAAR3P	Q9P1P4	343 aa		12.42	□□□□□ -0.42
MATR3-238	ENST00000512107	LRCH1	Q9Y2L9	728 aa		12.42	□□□□□ -0.42
MATR3-238	ENST00000512107	SPEF1	Q9Y4P9	236 aa		12.42	□□□□□ -0.42
MATR3-238	ENST00000512107	SNX5	Q9Y5X3	404 aa		12.42	□□□□□ -0.42
MATR3-238	ENST00000512107	POLQ	O75417	2590 aa		12.41	□□□□□ -0.42
MATR3-238	ENST00000512107		A6NIN4	97 aa		12.41	□□□□□ -0.42
MATR3-238	ENST00000512107	OVOL3	O00110	214 aa		12.41	□□□□□ -0.42
MATR3-238	ENST00000512107	MLNR	O43193	412 aa		12.41	□□□□□ -0.42
MATR3-238	ENST00000512107	MT-ND5	P03915	603 aa		12.41	□□□□□ -0.42
MATR3-238	ENST00000512107	SMIM18	P0DKX4	95 aa		12.41	□□□□□ -0.42
MATR3-238	ENST00000512107	MYL12A	P19105	171 aa		12.41	□□□□□ -0.42
MATR3-238	ENST00000512107	KITLG	P21583	273 aa		12.41	□□□□□ -0.42
MATR3-238	ENST00000512107	GSK3A	P49840	483 aa		12.41	□□□□□ -0.42
MATR3-238	ENST00000512107	CHN2	P52757	468 aa		12.41	□□□□□ -0.42
MATR3-238	ENST00000512107	ACTA2	P62736	377 aa		12.41	□□□□□ -0.42
MATR3-238	ENST00000512107	ACTG2	P63267	376 aa		12.41	□□□□□ -0.42
MATR3-238	ENST00000512107	EMX1	Q04741	257 aa	Predicted RBP	12.41	□□□□□ -0.42
MATR3-238	ENST00000512107	CHD3	Q12873	2000 aa	Known RBP	12.41	□□□□□ -0.42
MATR3-238	ENST00000512107	DMRTC1	Q5HYR2	192 aa		12.41	□□□□□ -0.42
MATR3-238	ENST00000512107	BCL2L15	Q5TBC7	163 aa		12.41	□□□□□ -0.42
MATR3-238	ENST00000512107	PAMR1	Q6UXH9	720 aa		12.41	□□□□□ -0.42
MATR3-238	ENST00000512107		Q6ZSR3	168 aa		12.41	□□□□□ -0.42
MATR3-238	ENST00000512107	KCTD20	Q7Z5Y7	419 aa		12.41	□□□□□ -0.42
MATR3-238	ENST00000512107	FBXL14	Q8N1E6	418 aa		12.41	□□□□□ -0.42
MATR3-238	ENST00000512107	PLPP7	Q8NBV4	271 aa		12.41	□□□□□ -0.42
MATR3-238	ENST00000512107	BHLHE23	Q8NDY6	225 aa		12.41	□□□□□ -0.42
MATR3-238	ENST00000512107	OR56B2P	Q8NGI1	322 aa		12.41	□□□□□ -0.42
MATR3-238	ENST00000512107	OR14K1	Q8NGZ2	314 aa		12.41	□□□□□ -0.42
MATR3-238	ENST00000512107	FAM71F1	Q96KD3	344 aa	Predicted RBP	12.41	□□□□□ -0.42
MATR3-238	ENST00000512107	PDCD1LG2	Q9BQ51	273 aa		12.41	□□□□□ -0.42
MATR3-238	ENST00000512107	YTHDF1	Q9BYJ9	559 aa	Known RBP	12.41	□□□□□ -0.42
MATR3-238	ENST00000512107	OR10A2	Q9H208	303 aa		12.41	□□□□□ -0.42
MATR3-238	ENST00000512107	MSL2	Q9HCI7	577 aa		12.41	□□□□□ -0.42
MATR3-238	ENST00000512107	CBLN4	Q9NTU7	201 aa		12.41	□□□□□ -0.42
MATR3-238	ENST00000512107	CSMD2	Q7Z408	3487 aa		12.4	□□□□□ -0.42
MATR3-238	ENST00000512107		A0A0U1RQV5	110 aa		12.4	□□□□□ -0.42
MATR3-238	ENST00000512107	PNMA8C	A0A1B0GUJ8	204 aa		12.4	□□□□□ -0.42
MATR3-238	ENST00000512107	ACOD1	A6NK06	481 aa		12.4	□□□□□ -0.42
MATR3-238	ENST00000512107	CD300LB	A8K4G0	201 aa		12.4	□□□□□ -0.42
MATR3-238	ENST00000512107		J3QW42	95 aa		12.4	□□□□□ -0.42
MATR3-238	ENST00000512107	LY6H	O94772	140 aa		12.4	□□□□□ -0.42
MATR3-238	ENST00000512107	ZFPL1	O95159	310 aa		12.4	□□□□□ -0.42
MATR3-238	ENST00000512107	RAC2	P15153	192 aa		12.4	□□□□□ -0.42
MATR3-238	ENST00000512107	CCL1	P22362	96 aa		12.4	□□□□□ -0.42
MATR3-238	ENST00000512107	EEF1B2	P24534	225 aa	Known RBP	12.4	□□□□□ -0.42
MATR3-238	ENST00000512107	WNT4	P56705	351 aa		12.4	□□□□□ -0.42
MATR3-238	ENST00000512107	KLF3	P57682	345 aa	Predicted RBP	12.4	□□□□□ -0.42
MATR3-238	ENST00000512107	CDK5R1	Q15078	307 aa		12.4	□□□□□ -0.42
MATR3-238	ENST00000512107	TIGD6	Q17RP2	521 aa		12.4	□□□□□ -0.42
MATR3-238	ENST00000512107	KCTD21	Q4G0X4	260 aa		12.4	□□□□□ -0.42
MATR3-238	ENST00000512107	DMKN	Q6E0U4	476 aa	Predicted RBP	12.4	□□□□□ -0.42
MATR3-238	ENST00000512107	ARL9	Q6T311	187 aa		12.4	□□□□□ -0.42
MATR3-238	ENST00000512107	FAM220A	Q7Z4H9	259 aa		12.4	□□□□□ -0.42
MATR3-238	ENST00000512107	TGIF2LY	Q8IUE0	185 aa		12.4	□□□□□ -0.42
MATR3-238	ENST00000512107	PGLYRP3	Q96LB9	341 aa		12.4	□□□□□ -0.42
MATR3-238	ENST00000512107	OPALIN	Q96PE5	141 aa		12.4	□□□□□ -0.42
MATR3-238	ENST00000512107	CACNG6	Q9BXT2	260 aa		12.4	□□□□□ -0.42
MATR3-238	ENST00000512107	TPK1	Q9H3S4	243 aa		12.4	□□□□□ -0.42
MATR3-238	ENST00000512107	ACOT13	Q9NPJ3	140 aa		12.4	□□□□□ -0.42
MATR3-238	ENST00000512107	ITPR2	Q14571	2701 aa		12.4	□□□□□ -0.42
MATR3-238	ENST00000512107	IQCF6	A8MYZ5	107 aa		12.39	□□□□□ -0.43
MATR3-238	ENST00000512107		B9A039	149 aa		12.39	□□□□□ -0.43
MATR3-238	ENST00000512107	XRCC2	O43543	280 aa		12.39	□□□□□ -0.43
MATR3-238	ENST00000512107	NCR1	O76036	304 aa		12.39	□□□□□ -0.43
MATR3-238	ENST00000512107	APOC1	P02654	83 aa		12.39	□□□□□ -0.43
MATR3-238	ENST00000512107	HLA-DPB1	P04440	258 aa		12.39	□□□□□ -0.43
MATR3-238	ENST00000512107	TACSTD2	P09758	323 aa		12.39	□□□□□ -0.43
MATR3-238	ENST00000512107	TGM4	P49221	684 aa		12.39	□□□□□ -0.43
MATR3-238	ENST00000512107	CCR9	P51686	369 aa		12.39	□□□□□ -0.43
MATR3-238	ENST00000512107	GBX2	P52951	348 aa	Predicted RBP	12.39	□□□□□ -0.43
MATR3-238	ENST00000512107	RPS23	P62266	143 aa	Known RBP	12.39	□□□□□ -0.43
MATR3-238	ENST00000512107	RPS11	P62280	158 aa	Known RBP eCLIP	12.39	□□□□□ -0.43
MATR3-238	ENST00000512107	INSL4	Q14641	139 aa		12.39	□□□□□ -0.43
MATR3-238	ENST00000512107	OR8B8	Q15620	311 aa		12.39	□□□□□ -0.43
MATR3-238	ENST00000512107	ASPHD2	Q6ICH7	369 aa		12.39	□□□□□ -0.43
MATR3-238	ENST00000512107	ZNF773	Q6PK81	442 aa		12.39	□□□□□ -0.43
MATR3-238	ENST00000512107	TMPRSS11A	Q6ZMR5	421 aa		12.39	□□□□□ -0.43
MATR3-238	ENST00000512107	PGAP1	Q75T13	922 aa		12.39	□□□□□ -0.43
MATR3-238	ENST00000512107	MRPL21	Q7Z2W9	205 aa	Known RBP	12.39	□□□□□ -0.43

Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms