RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 MAP2K3P46734 347 aa13.23□□□□□ -0.29
SCLT1-209ENST00000511426 PITPNAQ00169 270 aa13.23□□□□□ -0.29
SCLT1-209ENST00000511426 RAB11BQ15907 218 aa13.23□□□□□ -0.29
SCLT1-209ENST00000511426 ZNF79Q15937 498 aa13.23□□□□□ -0.29
SCLT1-209ENST00000511426 RGS21Q2M5E4 152 aa13.23□□□□□ -0.29
SCLT1-209ENST00000511426 SFRP5Q5T4F7 317 aa13.23□□□□□ -0.29
SCLT1-209ENST00000511426 PYHIN1Q6K0P9 492 aa13.23□□□□□ -0.29
SCLT1-209ENST00000511426 VWA1Q6PCB0 445 aa13.23□□□□□ -0.29
SCLT1-209ENST00000511426 BTLAQ7Z6A9 289 aa13.23□□□□□ -0.29
SCLT1-209ENST00000511426 LYPD6Q86Y78 171 aa13.23□□□□□ -0.29
SCLT1-209ENST00000511426 FAM169BQ8N8A8 192 aa13.23□□□□□ -0.29
SCLT1-209ENST00000511426 KDF1Q8NAX2 398 aaPredicted RBP13.23□□□□□ -0.29
SCLT1-209ENST00000511426 SEMA6DQ8NFY4 1073 aa13.23□□□□□ -0.29
SCLT1-209ENST00000511426 SETD6Q8TBK2 473 aa13.23□□□□□ -0.29
SCLT1-209ENST00000511426 SLC7A6Q92536 515 aa13.23□□□□□ -0.29
SCLT1-209ENST00000511426 PTX4Q96A99 478 aa13.23□□□□□ -0.29
SCLT1-209ENST00000511426 SGK3Q96BR1 496 aa13.23□□□□□ -0.29
SCLT1-209ENST00000511426 REEP6Q96HR9 211 aa13.23□□□□□ -0.29
SCLT1-209ENST00000511426 POM121L2Q96KW2 1035 aa13.23□□□□□ -0.29
SCLT1-209ENST00000511426 CHST5Q9GZS9 411 aa13.23□□□□□ -0.29
SCLT1-209ENST00000511426 PIGMQ9H3S5 423 aa13.23□□□□□ -0.29
SCLT1-209ENST00000511426 PRORYQ9H606 182 aa13.23□□□□□ -0.29
SCLT1-209ENST00000511426 PPP1R3EQ9H7J1 279 aa13.23□□□□□ -0.29
SCLT1-209ENST00000511426 EXTL2Q9UBQ6 330 aa13.23□□□□□ -0.29
SCLT1-209ENST00000511426 NCOA6Q14686 2063 aaPredicted RBP13.22□□□□□ -0.29
SCLT1-209ENST00000511426 MAGEB3O15480 346 aa13.22□□□□□ -0.29
SCLT1-209ENST00000511426 PAHP00439 452 aa13.22□□□□□ -0.29
SCLT1-209ENST00000511426 SNRPBP14678 240 aaKnown RBP13.22□□□□□ -0.29
SCLT1-209ENST00000511426 HTR2CP28335 458 aa13.22□□□□□ -0.29
SCLT1-209ENST00000511426 DEFA1P59665 94 aa13.22□□□□□ -0.29
SCLT1-209ENST00000511426 DEFA3P59666 94 aa13.22□□□□□ -0.29
SCLT1-209ENST00000511426 RIPPLY1Q0D2K3 151 aa13.22□□□□□ -0.29
SCLT1-209ENST00000511426 MALLQ13021 153 aa13.22□□□□□ -0.29
SCLT1-209ENST00000511426 OR8B8Q15620 311 aa13.22□□□□□ -0.29
SCLT1-209ENST00000511426 SNAI3Q3KNW1 292 aa13.22□□□□□ -0.29
SCLT1-209ENST00000511426 HES5Q5TA89 166 aa13.22□□□□□ -0.29
SCLT1-209ENST00000511426 NAA40Q86UY6 237 aa13.22□□□□□ -0.29
SCLT1-209ENST00000511426 LYZL4Q96KX0 146 aa13.22□□□□□ -0.29
SCLT1-209ENST00000511426 TBCCD1Q9NVR7 557 aa13.22□□□□□ -0.29
SCLT1-209ENST00000511426 CACNA1CQ13936 2221 aa13.22□□□□□ -0.29
SCLT1-209ENST00000511426 LOC100289279A0A1B0GTE1 492 aa13.21□□□□□ -0.29
SCLT1-209ENST00000511426 MSTNO14793 375 aa13.21□□□□□ -0.29
SCLT1-209ENST00000511426 TOXO94900 526 aa13.21□□□□□ -0.29
SCLT1-209ENST00000511426 MNDAP41218 407 aa13.21□□□□□ -0.29
SCLT1-209ENST00000511426 PITPNBP48739 271 aa13.21□□□□□ -0.29
SCLT1-209ENST00000511426 FOXF2Q12947 444 aa13.21□□□□□ -0.29
SCLT1-209ENST00000511426 FAM189A2Q15884 450 aa13.21□□□□□ -0.29
SCLT1-209ENST00000511426 TBC1D28Q2M2D7 210 aa13.21□□□□□ -0.29
SCLT1-209ENST00000511426 HIKESHIQ53FT3 197 aa13.21□□□□□ -0.29
SCLT1-209ENST00000511426 HACD4Q5VWC8 232 aa13.21□□□□□ -0.29
SCLT1-209ENST00000511426 UNQ6126/PRO20091Q6UXV3 157 aa13.21□□□□□ -0.29
SCLT1-209ENST00000511426 KRT74Q7RTS7 529 aa13.21□□□□□ -0.29
SCLT1-209ENST00000511426 SSX8Q7RTT4 187 aa13.21□□□□□ -0.29
SCLT1-209ENST00000511426 OR5L1Q8NGL2 311 aa13.21□□□□□ -0.29
SCLT1-209ENST00000511426 SPSB1Q96BD6 273 aa13.21□□□□□ -0.29
SCLT1-209ENST00000511426 HAVCR1Q96D42 359 aa13.21□□□□□ -0.29
SCLT1-209ENST00000511426 ZNF75AQ96N20 296 aa13.21□□□□□ -0.29
SCLT1-209ENST00000511426 ZNF629Q9UEG4 869 aaPredicted RBP13.21□□□□□ -0.29
SCLT1-209ENST00000511426 OR5V1Q9UGF6 321 aa13.21□□□□□ -0.29
SCLT1-209ENST00000511426 AMDHD2Q9Y303 409 aa13.21□□□□□ -0.29
SCLT1-209ENST00000511426 N6AMT1Q9Y5N5 214 aa13.21□□□□□ -0.29
SCLT1-209ENST00000511426 ARHGAP21Q5T5U3 1957 aa13.21□□□□□ -0.29
SCLT1-209ENST00000511426 LOC100509620A0A075B734 347 aa13.21□□□□□ -0.3
SCLT1-209ENST00000511426 A0A0A6YYH2 397 aa13.21□□□□□ -0.3
SCLT1-209ENST00000511426 hCG_38984A0A1B0GV85 526 aa13.21□□□□□ -0.3
SCLT1-209ENST00000511426 C5orf49A4QMS7 147 aa13.21□□□□□ -0.3
SCLT1-209ENST00000511426 A6NJ64 397 aa13.21□□□□□ -0.3
SCLT1-209ENST00000511426 E9PLN8 166 aa13.21□□□□□ -0.3
SCLT1-209ENST00000511426 H3BSH0 61 aa13.21□□□□□ -0.3
SCLT1-209ENST00000511426 CTDSPLO15194 276 aa13.21□□□□□ -0.3
SCLT1-209ENST00000511426 EIF4EP06730 217 aaKnown RBP13.21□□□□□ -0.3
SCLT1-209ENST00000511426 PRF1P14222 555 aa13.21□□□□□ -0.3
SCLT1-209ENST00000511426 CBR1P16152 277 aa13.21□□□□□ -0.3
SCLT1-209ENST00000511426 TUBG1P23258 451 aa13.21□□□□□ -0.3
SCLT1-209ENST00000511426 ART1P52961 327 aa13.21□□□□□ -0.3
SCLT1-209ENST00000511426 MRPS10P82664 201 aaKnown RBP13.21□□□□□ -0.3
SCLT1-209ENST00000511426 HGFACQ04756 655 aa13.21□□□□□ -0.3
SCLT1-209ENST00000511426 IL18Q14116 193 aa13.21□□□□□ -0.3
SCLT1-209ENST00000511426 GFOD2Q3B7J2 385 aa13.21□□□□□ -0.3
SCLT1-209ENST00000511426 DOLPP1Q86YN1 238 aa13.21□□□□□ -0.3
SCLT1-209ENST00000511426 LYSMD2Q8IV50 215 aa13.21□□□□□ -0.3
SCLT1-209ENST00000511426 C1orf174Q8IYL3 243 aa13.21□□□□□ -0.3
SCLT1-209ENST00000511426 FTMTQ8N4E7 242 aa13.21□□□□□ -0.3
SCLT1-209ENST00000511426 DNAAF1Q8NEP3 725 aa13.21□□□□□ -0.3
SCLT1-209ENST00000511426 OR51A2Q8NGJ7 313 aa13.21□□□□□ -0.3
SCLT1-209ENST00000511426 S100A16Q96FQ6 103 aaKnown RBP13.21□□□□□ -0.3
SCLT1-209ENST00000511426 TUBG2Q9NRH3 451 aa13.21□□□□□ -0.3
SCLT1-209ENST00000511426 GHRLQ9UBU3 117 aa13.21□□□□□ -0.3
SCLT1-209ENST00000511426 FBLN5Q9UBX5 448 aa13.21□□□□□ -0.3
SCLT1-209ENST00000511426 ZNF503-AS2A6NEH8 195 aa13.2□□□□□ -0.3
SCLT1-209ENST00000511426 ZNHIT1O43257 154 aa13.2□□□□□ -0.3
SCLT1-209ENST00000511426 RAD51DO75771 328 aa13.2□□□□□ -0.3
SCLT1-209ENST00000511426 SCGNO76038 276 aa13.2□□□□□ -0.3
SCLT1-209ENST00000511426 IGKV3-15P01624 115 aa13.2□□□□□ -0.3
SCLT1-209ENST00000511426 UBBP0CG47 229 aa13.2□□□□□ -0.3
SCLT1-209ENST00000511426 GLI4P10075 376 aa13.2□□□□□ -0.3
SCLT1-209ENST00000511426 ZNF14P17017 642 aaPredicted RBP13.2□□□□□ -0.3
SCLT1-209ENST00000511426 PSMB1P20618 241 aaKnown RBP13.2□□□□□ -0.3
SCLT1-209ENST00000511426 SPOCK1Q08629 439 aa13.2□□□□□ -0.3
SCLT1-209ENST00000511426 CNN3Q15417 329 aaKnown RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms