RNA–Protein interactions for RNA: ENST00000510377.5

USP38-202, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 1 (best) BASIC

Gene USP38, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-202ENST00000510377 DAOP14920 347 aa13.32□□□□□ -0.28
USP38-202ENST00000510377 ZNF44P15621 663 aa13.32□□□□□ -0.28
USP38-202ENST00000510377 GPR3P46089 330 aa13.32□□□□□ -0.28
USP38-202ENST00000510377 OR1D5P58170 312 aa13.32□□□□□ -0.28
USP38-202ENST00000510377 RHEBQ15382 184 aa13.32□□□□□ -0.28
USP38-202ENST00000510377 SP6Q3SY56 376 aa13.32□□□□□ -0.28
USP38-202ENST00000510377 PHF19Q5T6S3 580 aa13.32□□□□□ -0.28
USP38-202ENST00000510377 MAFAQ8NHW3 353 aaPredicted RBP13.32□□□□□ -0.28
USP38-202ENST00000510377 FBXO17Q96EF6 278 aa13.32□□□□□ -0.28
USP38-202ENST00000510377 SARGQ9BW04 601 aa13.32□□□□□ -0.28
USP38-202ENST00000510377 OBP2AQ9NY56 170 aa13.32□□□□□ -0.28
USP38-202ENST00000510377 KLHL13Q9P2N7 655 aa13.32□□□□□ -0.28
USP38-202ENST00000510377 KLF15Q9UIH9 416 aa13.32□□□□□ -0.28
USP38-202ENST00000510377 NXT1Q9UKK6 140 aaKnown RBP13.32□□□□□ -0.28
USP38-202ENST00000510377 FREM3P0C091 2139 aa13.32□□□□□ -0.28
USP38-202ENST00000510377 TRBV5-5A0A0J9YX44 114 aa13.32□□□□□ -0.28
USP38-202ENST00000510377 PRSS12P56730 875 aa13.32□□□□□ -0.28
USP38-202ENST00000510377 GABREP78334 506 aa13.32□□□□□ -0.28
USP38-202ENST00000510377 HNF4GQ14541 408 aa13.32□□□□□ -0.28
USP38-202ENST00000510377 ELAVL1Q15717 326 aaKnown RBP13.32□□□□□ -0.28
USP38-202ENST00000510377 RPL7L1Q6DKI1 246 aaKnown RBP13.32□□□□□ -0.28
USP38-202ENST00000510377 NICN1Q9BSH3 213 aa13.32□□□□□ -0.28
USP38-202ENST00000510377 B3GALT5Q9Y2C3 310 aa13.32□□□□□ -0.28
USP38-202ENST00000510377 FAM221BA6H8Z2 402 aa13.32□□□□□ -0.28
USP38-202ENST00000510377 SNRNP200O75643 2136 aaKnown RBP13.32□□□□□ -0.28
USP38-202ENST00000510377 RAD51DO75771 328 aa13.32□□□□□ -0.28
USP38-202ENST00000510377 CHRM2P08172 466 aa13.32□□□□□ -0.28
USP38-202ENST00000510377 ASCL1P50553 236 aa13.32□□□□□ -0.28
USP38-202ENST00000510377 CLDN17P56750 224 aa13.32□□□□□ -0.28
USP38-202ENST00000510377 DCAF7P61962 342 aa13.32□□□□□ -0.28
USP38-202ENST00000510377 NR0B2Q15466 257 aa13.32□□□□□ -0.28
USP38-202ENST00000510377 ISOC2Q96AB3 205 aa13.32□□□□□ -0.28
USP38-202ENST00000510377 ARHGAP5-AS1Q96IT6 56 aa13.32□□□□□ -0.28
USP38-202ENST00000510377 PHF7Q9BWX1 381 aaPredicted RBP13.32□□□□□ -0.28
USP38-202ENST00000510377 PCDHGA1Q9Y5H4 931 aa13.32□□□□□ -0.28
USP38-202ENST00000510377 IGHV5-51A0A0C4DH38 117 aa13.31□□□□□ -0.28
USP38-202ENST00000510377 RNASEK-C17orf49H0YIS7 233 aa13.31□□□□□ -0.28
USP38-202ENST00000510377 TNFSF14O43557 240 aa13.31□□□□□ -0.28
USP38-202ENST00000510377 EIF4E2O60573 245 aaKnown RBP13.31□□□□□ -0.28
USP38-202ENST00000510377 RPL12P30050 165 aaKnown RBP13.31□□□□□ -0.28
USP38-202ENST00000510377 MTCP1P56278 107 aa13.31□□□□□ -0.28
USP38-202ENST00000510377 TAS2R46P59540 309 aa13.31□□□□□ -0.28
USP38-202ENST00000510377 SSBP1Q04837 148 aaKnown RBP13.31□□□□□ -0.28
USP38-202ENST00000510377 SKP2Q13309 424 aa13.31□□□□□ -0.28
USP38-202ENST00000510377 USF2Q15853 346 aaPredicted RBP13.31□□□□□ -0.28
USP38-202ENST00000510377 TMEM128Q5BJH2 165 aa13.31□□□□□ -0.28
USP38-202ENST00000510377 KIAA0895LQ68EN5 471 aa13.31□□□□□ -0.28
USP38-202ENST00000510377 FBXW12Q6X9E4 464 aa13.31□□□□□ -0.28
USP38-202ENST00000510377 LANCL3Q6ZV70 420 aa13.31□□□□□ -0.28
USP38-202ENST00000510377 PLXDC1Q8IUK5 500 aa13.31□□□□□ -0.28
USP38-202ENST00000510377 SUMF2Q8NBJ7 301 aa13.31□□□□□ -0.28
USP38-202ENST00000510377 OR52H1Q8NGJ2 320 aa13.31□□□□□ -0.28
USP38-202ENST00000510377 ARL5BQ96KC2 179 aa13.31□□□□□ -0.28
USP38-202ENST00000510377 FOXQ1Q9C009 403 aa13.31□□□□□ -0.28
USP38-202ENST00000510377 IFT22Q9H7X7 185 aa13.31□□□□□ -0.28
USP38-202ENST00000510377 ZNF275Q9NSD4 429 aaPredicted RBP13.31□□□□□ -0.28
USP38-202ENST00000510377 FAM212BQ9NTI7 297 aaPredicted RBP13.31□□□□□ -0.28
USP38-202ENST00000510377 C1orf123Q9NWV4 160 aa13.31□□□□□ -0.28
USP38-202ENST00000510377 LUZP4Q9P127 313 aa13.31□□□□□ -0.28
USP38-202ENST00000510377 PLXNA4Q9HCM2 1894 aa13.31□□□□□ -0.28
USP38-202ENST00000510377 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.31□□□□□ -0.28
USP38-202ENST00000510377 A8MXK9 166 aa13.31□□□□□ -0.28
USP38-202ENST00000510377 CRHP06850 196 aa13.31□□□□□ -0.28
USP38-202ENST00000510377 SPP1P10451 314 aa13.31□□□□□ -0.28
USP38-202ENST00000510377 PJVKQ0ZLH3 352 aa13.31□□□□□ -0.28
USP38-202ENST00000510377 UQCC2Q9BRT2 126 aa13.31□□□□□ -0.28
USP38-202ENST00000510377 ZNF2Q9BSG1 426 aaPredicted RBP13.31□□□□□ -0.28
USP38-202ENST00000510377 TRAV20A0A0B4J274 112 aa13.31□□□□□ -0.28
USP38-202ENST00000510377 OR6C65A6NJZ3 312 aa13.31□□□□□ -0.28
USP38-202ENST00000510377 TMEM127O75204 238 aa13.31□□□□□ -0.28
USP38-202ENST00000510377 TRAPPC6AO75865 159 aa13.31□□□□□ -0.28
USP38-202ENST00000510377 CRYBA1P05813 215 aa13.31□□□□□ -0.28
USP38-202ENST00000510377 SMIM10L1P0DMW3 83 aa13.31□□□□□ -0.28
USP38-202ENST00000510377 EPHA1P21709 976 aa13.31□□□□□ -0.28
USP38-202ENST00000510377 CSNK1EP49674 416 aaKnown RBP13.31□□□□□ -0.28
USP38-202ENST00000510377 TMEM92Q6UXU6 159 aa13.31□□□□□ -0.28
USP38-202ENST00000510377 OR5L1Q8NGL2 311 aa13.31□□□□□ -0.28
USP38-202ENST00000510377 SMIM10Q96HG1 83 aa13.31□□□□□ -0.28
USP38-202ENST00000510377 CCNL2Q96S94 520 aaPredicted RBP13.31□□□□□ -0.28
USP38-202ENST00000510377 FGF21Q9NSA1 209 aa13.31□□□□□ -0.28
USP38-202ENST00000510377 PURGQ9UJV8 347 aaKnown RBP13.31□□□□□ -0.28
USP38-202ENST00000510377 SLC5A6Q9Y289 635 aa13.31□□□□□ -0.28
USP38-202ENST00000510377 SOCS1O15524 211 aa13.3□□□□□ -0.28
USP38-202ENST00000510377 FOXS1O43638 330 aa13.3□□□□□ -0.28
USP38-202ENST00000510377 TPPPO94811 219 aa13.3□□□□□ -0.28
USP38-202ENST00000510377 CX3CR1P49238 355 aa13.3□□□□□ -0.28
USP38-202ENST00000510377 PDZD11Q5EBL8 140 aa13.3□□□□□ -0.28
USP38-202ENST00000510377 PGAP1Q75T13 922 aa13.3□□□□□ -0.28
USP38-202ENST00000510377 WWTR1Q9GZV5 400 aa13.3□□□□□ -0.28
USP38-202ENST00000510377 SLC17A5Q9NRA2 495 aa13.3□□□□□ -0.28
USP38-202ENST00000510377 FLVCR1Q9Y5Y0 555 aa13.3□□□□□ -0.28
USP38-202ENST00000510377 ANAPC1Q9H1A4 1944 aa13.3□□□□□ -0.28
USP38-202ENST00000510377 CACNA1HO95180 2353 aa13.3□□□□□ -0.28
USP38-202ENST00000510377 TLCD2A6NGC4 264 aa13.3□□□□□ -0.28
USP38-202ENST00000510377 TTLL8A6PVC2 850 aa13.3□□□□□ -0.28
USP38-202ENST00000510377 ABCD3P28288 659 aa13.3□□□□□ -0.28
USP38-202ENST00000510377 HNRNPKP61978 463 aaKnown RBP eCLIP13.3□□□□□ -0.28
USP38-202ENST00000510377 INSM1Q01101 510 aaPredicted RBP13.3□□□□□ -0.28
USP38-202ENST00000510377 ZCCHC4Q9H5U6 513 aa13.3□□□□□ -0.28
USP38-202ENST00000510377 UQCC1Q9NVA1 299 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms