RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 CYP4Z1Q86W10 505 aa13.1□□□□□ -0.31
RAB40C-202ENST00000509637 RNF148Q8N7C7 305 aa13.1□□□□□ -0.31
RAB40C-202ENST00000509637 ZSCAN4Q8NAM6 433 aaPredicted RBP13.1□□□□□ -0.31
RAB40C-202ENST00000509637 CYB561A3Q8NBI2 242 aa13.1□□□□□ -0.31
RAB40C-202ENST00000509637 FANK1Q8TC84 345 aa13.1□□□□□ -0.31
RAB40C-202ENST00000509637 SPRYD4Q8WW59 207 aaPredicted RBP13.1□□□□□ -0.31
RAB40C-202ENST00000509637 ZNF799Q96GE5 643 aa13.1□□□□□ -0.31
RAB40C-202ENST00000509637 HOPXQ9BPY8 73 aaPredicted RBP13.1□□□□□ -0.31
RAB40C-202ENST00000509637 ADAT1Q9BUB4 502 aaKnown RBP13.1□□□□□ -0.31
RAB40C-202ENST00000509637 MMP27Q9H306 513 aa13.1□□□□□ -0.31
RAB40C-202ENST00000509637 AP3M1Q9Y2T2 418 aa13.1□□□□□ -0.31
RAB40C-202ENST00000509637 OOEPA6NGQ2 149 aa13.09□□□□□ -0.31
RAB40C-202ENST00000509637 SLC22A2O15244 555 aa13.09□□□□□ -0.31
RAB40C-202ENST00000509637 SELLP14151 372 aa13.09□□□□□ -0.31
RAB40C-202ENST00000509637 MSX2P35548 267 aaPredicted RBP13.09□□□□□ -0.31
RAB40C-202ENST00000509637 NPY4RP50391 375 aa13.09□□□□□ -0.31
RAB40C-202ENST00000509637 PSME3P61289 254 aa13.09□□□□□ -0.31
RAB40C-202ENST00000509637 OR8B8Q15620 311 aa13.09□□□□□ -0.31
RAB40C-202ENST00000509637 HACD2Q6Y1H2 254 aa13.09□□□□□ -0.31
RAB40C-202ENST00000509637 MRPL21Q7Z2W9 205 aaKnown RBP13.09□□□□□ -0.31
RAB40C-202ENST00000509637 LDLRAD3Q86YD5 345 aa13.09□□□□□ -0.31
RAB40C-202ENST00000509637 PNKDQ8N490 385 aa13.09□□□□□ -0.31
RAB40C-202ENST00000509637 Q8N7P7 452 aa13.09□□□□□ -0.31
RAB40C-202ENST00000509637 LY6G5BQ8NDX9 201 aa13.09□□□□□ -0.31
RAB40C-202ENST00000509637 OR56B2PQ8NGI1 322 aa13.09□□□□□ -0.31
RAB40C-202ENST00000509637 OR51L1Q8NGJ5 315 aa13.09□□□□□ -0.31
RAB40C-202ENST00000509637 OR8D4Q8NGM9 314 aa13.09□□□□□ -0.31
RAB40C-202ENST00000509637 SSMEM1Q8WWF3 244 aa13.09□□□□□ -0.31
RAB40C-202ENST00000509637 GATAD2BQ8WXI9 593 aa13.09□□□□□ -0.31
RAB40C-202ENST00000509637 DYRK2Q92630 601 aa13.09□□□□□ -0.31
RAB40C-202ENST00000509637 KCTD14Q9BQ13 255 aaPredicted RBP13.09□□□□□ -0.31
RAB40C-202ENST00000509637 EGLN3Q9H6Z9 239 aa13.09□□□□□ -0.31
RAB40C-202ENST00000509637 FN3KRPQ9HA64 309 aa13.09□□□□□ -0.31
RAB40C-202ENST00000509637 ZNF319Q9P2F9 582 aa13.09□□□□□ -0.31
RAB40C-202ENST00000509637 RENP00797 406 aa13.08□□□□□ -0.32
RAB40C-202ENST00000509637 LIPFP07098 398 aa13.08□□□□□ -0.32
RAB40C-202ENST00000509637 SLC6A6P31641 620 aa13.08□□□□□ -0.32
RAB40C-202ENST00000509637 PRKXP51817 358 aa13.08□□□□□ -0.32
RAB40C-202ENST00000509637 TPTEP56180 551 aa13.08□□□□□ -0.32
RAB40C-202ENST00000509637 CSNK2BP67870 215 aa13.08□□□□□ -0.32
RAB40C-202ENST00000509637 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.08□□□□□ -0.32
RAB40C-202ENST00000509637 ECH1Q13011 328 aa13.08□□□□□ -0.32
RAB40C-202ENST00000509637 KLHL12Q53G59 568 aa13.08□□□□□ -0.32
RAB40C-202ENST00000509637 TEX36Q5VZQ5 186 aa13.08□□□□□ -0.32
RAB40C-202ENST00000509637 CD276Q5ZPR3 534 aa13.08□□□□□ -0.32
RAB40C-202ENST00000509637 DNM1P34Q6PK57 102 aa13.08□□□□□ -0.32
RAB40C-202ENST00000509637 CCL13Q99616 98 aa13.08□□□□□ -0.32
RAB40C-202ENST00000509637 IFT27Q9BW83 186 aa13.08□□□□□ -0.32
RAB40C-202ENST00000509637 FGF23Q9GZV9 251 aaPredicted RBP13.08□□□□□ -0.32
RAB40C-202ENST00000509637 KAAG1Q9UBP8 84 aa13.08□□□□□ -0.32
RAB40C-202ENST00000509637 RPUSD1Q9UJJ7 312 aaKnown RBP13.08□□□□□ -0.32
RAB40C-202ENST00000509637 FAM32AQ9Y421 112 aaKnown RBP13.08□□□□□ -0.32
RAB40C-202ENST00000509637 A0A1W2PRD5 423 aa13.07□□□□□ -0.32
RAB40C-202ENST00000509637 A0A1W2PRF3 423 aa13.07□□□□□ -0.32
RAB40C-202ENST00000509637 A0A1W2PRM7 423 aa13.07□□□□□ -0.32
RAB40C-202ENST00000509637 SLC22A31A6NKX4 558 aa13.07□□□□□ -0.32
RAB40C-202ENST00000509637 RNASEK-C17orf49H0YIS7 233 aa13.07□□□□□ -0.32
RAB40C-202ENST00000509637 BHLHE40O14503 412 aa13.07□□□□□ -0.32
RAB40C-202ENST00000509637 GMDSO60547 372 aa13.07□□□□□ -0.32
RAB40C-202ENST00000509637 NUDT2P50583 147 aa13.07□□□□□ -0.32
RAB40C-202ENST00000509637 MALLQ13021 153 aa13.07□□□□□ -0.32
RAB40C-202ENST00000509637 KLRD1Q13241 179 aa13.07□□□□□ -0.32
RAB40C-202ENST00000509637 PCK2Q16822 640 aa13.07□□□□□ -0.32
RAB40C-202ENST00000509637 SLC36A3Q495N2 470 aa13.07□□□□□ -0.32
RAB40C-202ENST00000509637 PGBD2Q6P3X8 592 aa13.07□□□□□ -0.32
RAB40C-202ENST00000509637 VMO1Q7Z5L0 202 aa13.07□□□□□ -0.32
RAB40C-202ENST00000509637 LNX2Q8N448 690 aa13.07□□□□□ -0.32
RAB40C-202ENST00000509637 FAM216BQ8N7L0 139 aa13.07□□□□□ -0.32
RAB40C-202ENST00000509637 ZNF511Q8NB15 262 aa13.07□□□□□ -0.32
RAB40C-202ENST00000509637 PLPP7Q8NBV4 271 aa13.07□□□□□ -0.32
RAB40C-202ENST00000509637 OR2AJ1Q8NGZ0 328 aa13.07□□□□□ -0.32
RAB40C-202ENST00000509637 TNFRSF14Q92956 283 aa13.07□□□□□ -0.32
RAB40C-202ENST00000509637 NDEL1Q9GZM8 345 aa13.07□□□□□ -0.32
RAB40C-202ENST00000509637 MYLK2Q9H1R3 596 aa13.07□□□□□ -0.32
RAB40C-202ENST00000509637 C16orf95Q9H693 158 aa13.07□□□□□ -0.32
RAB40C-202ENST00000509637 CNTD2Q9H8S5 307 aa13.07□□□□□ -0.32
RAB40C-202ENST00000509637 EFCAB1Q9HAE3 211 aa13.07□□□□□ -0.32
RAB40C-202ENST00000509637 MRGBPQ9NV56 204 aa13.07□□□□□ -0.32
RAB40C-202ENST00000509637 ZNF446Q9NWS9 450 aa13.07□□□□□ -0.32
RAB40C-202ENST00000509637 DNAJB11Q9UBS4 358 aa13.07□□□□□ -0.32
RAB40C-202ENST00000509637 TRAV38-1A0A0B4J264 116 aa13.06□□□□□ -0.32
RAB40C-202ENST00000509637 GGT3PA6NGU5 568 aa13.06□□□□□ -0.32
RAB40C-202ENST00000509637 M0QZ24 198 aa13.06□□□□□ -0.32
RAB40C-202ENST00000509637 GADD45GO95257 159 aa13.06□□□□□ -0.32
RAB40C-202ENST00000509637 HLA-DQA2P01906 255 aa13.06□□□□□ -0.32
RAB40C-202ENST00000509637 CLUP10909 449 aa13.06□□□□□ -0.32
RAB40C-202ENST00000509637 PDCD1Q15116 288 aa13.06□□□□□ -0.32
RAB40C-202ENST00000509637 WDR38Q5JTN6 314 aa13.06□□□□□ -0.32
RAB40C-202ENST00000509637 METTL11BQ5VVY1 283 aa13.06□□□□□ -0.32
RAB40C-202ENST00000509637 PRSS45Q7RTY3 260 aa13.06□□□□□ -0.32
RAB40C-202ENST00000509637 DCXRQ7Z4W1 244 aa13.06□□□□□ -0.32
RAB40C-202ENST00000509637 PNLDC1Q8NA58 520 aaKnown RBP13.06□□□□□ -0.32
RAB40C-202ENST00000509637 OR9Q1Q8NGQ5 310 aa13.06□□□□□ -0.32
RAB40C-202ENST00000509637 FAM110DQ8TAY7 271 aaPredicted RBP13.06□□□□□ -0.32
RAB40C-202ENST00000509637 TBC1D15Q8TC07 691 aa13.06□□□□□ -0.32
RAB40C-202ENST00000509637 C17orf50Q8WW18 174 aa13.06□□□□□ -0.32
RAB40C-202ENST00000509637 SPSB4Q96A44 273 aa13.06□□□□□ -0.32
RAB40C-202ENST00000509637 SGK3Q96BR1 496 aa13.06□□□□□ -0.32
RAB40C-202ENST00000509637 PYURFQ96I23 114 aa13.06□□□□□ -0.32
RAB40C-202ENST00000509637 AJUBAQ96IF1 538 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms