RNA–Protein interactions for RNA: ENST00000508618.5

GYPB-209, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 2

Gene GYPB, Length 388 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-209ENST00000508618 APOBEC3HQ6NTF7 200 aaKnown RBP0.95□□□□□ -2.26
GYPB-209ENST00000508618 MED27Q6P2C8 311 aa0.95□□□□□ -2.26
GYPB-209ENST00000508618 TMEM136Q6ZRR5 245 aa0.95□□□□□ -2.26
GYPB-209ENST00000508618 CENPQQ7L2Z9 268 aaPredicted RBP0.95□□□□□ -2.26
GYPB-209ENST00000508618 TCF24Q7RTU0 167 aa0.95□□□□□ -2.26
GYPB-209ENST00000508618 SLC22A9Q8IVM8 553 aa0.95□□□□□ -2.26
GYPB-209ENST00000508618 SNX31Q8N9S9 440 aa0.95□□□□□ -2.26
GYPB-209ENST00000508618 BPIFCQ8NFQ6 507 aa0.95□□□□□ -2.26
GYPB-209ENST00000508618 OR9G4Q8NGQ1 327 aa0.95□□□□□ -2.26
GYPB-209ENST00000508618 OR52N1Q8NH53 320 aa0.95□□□□□ -2.26
GYPB-209ENST00000508618 TSEN15Q8WW01 171 aaKnown RBP0.95□□□□□ -2.26
GYPB-209ENST00000508618 CAPSLQ8WWF8 208 aa0.95□□□□□ -2.26
GYPB-209ENST00000508618 RNF145Q96MT1 663 aa0.95□□□□□ -2.26
GYPB-209ENST00000508618 GSDMAQ96QA5 445 aa0.95□□□□□ -2.26
GYPB-209ENST00000508618 PDCD1LG2Q9BQ51 273 aa0.95□□□□□ -2.26
GYPB-209ENST00000508618 TMEM243Q9BU79 118 aa0.95□□□□□ -2.26
GYPB-209ENST00000508618 C20orf24Q9BUV8 137 aa0.95□□□□□ -2.26
GYPB-209ENST00000508618 EMC6Q9BV81 110 aa0.95□□□□□ -2.26
GYPB-209ENST00000508618 NEUROG2Q9H2A3 272 aa0.95□□□□□ -2.26
GYPB-209ENST00000508618 LYARQ9NX58 379 aaKnown RBP0.95□□□□□ -2.26
GYPB-209ENST00000508618 ZNF230Q9UIE0 474 aaPredicted RBP0.95□□□□□ -2.26
GYPB-209ENST00000508618 PITPNC1Q9UKF7 332 aa0.95□□□□□ -2.26
GYPB-209ENST00000508618 HES2Q9Y543 173 aa0.95□□□□□ -2.26
GYPB-209ENST00000508618 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP0.95□□□□□ -2.26
GYPB-209ENST00000508618 ADGRA3Q8IWK6 1321 aa0.94□□□□□ -2.26
GYPB-209ENST00000508618 TICRRQ7Z2Z1 1910 aa0.94□□□□□ -2.26
GYPB-209ENST00000508618 A0A1W2PNN7 141 aa0.94□□□□□ -2.26
GYPB-209ENST00000508618 GOLGA8OA6NCC3 632 aa0.94□□□□□ -2.26
GYPB-209ENST00000508618 C4orf51C9J302 202 aa0.94□□□□□ -2.26
GYPB-209ENST00000508618 NDUFC2-KCTD14E9PQ53 114 aa0.94□□□□□ -2.26
GYPB-209ENST00000508618 GOLGA8NF8WBI6 632 aa0.94□□□□□ -2.26
GYPB-209ENST00000508618 K7EMT4 169 aa0.94□□□□□ -2.26
GYPB-209ENST00000508618 SCELO95171 688 aa0.94□□□□□ -2.26
GYPB-209ENST00000508618 HBE1P02100 147 aa0.94□□□□□ -2.26
GYPB-209ENST00000508618 RPN2P04844 631 aa0.94□□□□□ -2.26
GYPB-209ENST00000508618 PFN1P07737 140 aaKnown RBP0.94□□□□□ -2.26
GYPB-209ENST00000508618 HSPD1P10809 573 aaKnown RBP0.94□□□□□ -2.26
GYPB-209ENST00000508618 RAB4AP20338 218 aa0.94□□□□□ -2.26
GYPB-209ENST00000508618 USF1P22415 310 aaPredicted RBP0.94□□□□□ -2.26
GYPB-209ENST00000508618 HLA-DMAP28067 261 aa0.94□□□□□ -2.26
GYPB-209ENST00000508618 OR1E1P30953 314 aa0.94□□□□□ -2.26
GYPB-209ENST00000508618 TAGLN2P37802 199 aaKnown RBP0.94□□□□□ -2.26
GYPB-209ENST00000508618 PRKCDQ05655 676 aa0.94□□□□□ -2.26
GYPB-209ENST00000508618 TRDNQ13061 729 aa0.94□□□□□ -2.26
GYPB-209ENST00000508618 BAMBIQ13145 260 aa0.94□□□□□ -2.26
GYPB-209ENST00000508618 HSP90AB3PQ58FF7 597 aa0.94□□□□□ -2.26
GYPB-209ENST00000508618 DEGS2Q6QHC5 323 aa0.94□□□□□ -2.26
GYPB-209ENST00000508618 SMARCD3Q6STE5 483 aa0.94□□□□□ -2.26
GYPB-209ENST00000508618 SSX9Q7RTT3 188 aa0.94□□□□□ -2.26
GYPB-209ENST00000508618 CBLN2Q8IUK8 224 aa0.94□□□□□ -2.26
GYPB-209ENST00000508618 JAGN1Q8N5M9 183 aa0.94□□□□□ -2.26
GYPB-209ENST00000508618 RNF10Q8N5U6 811 aaKnown RBP0.94□□□□□ -2.26
GYPB-209ENST00000508618 TTC29Q8NA56 475 aaPredicted RBP0.94□□□□□ -2.26
GYPB-209ENST00000508618 OR2Z1Q8NG97 314 aa0.94□□□□□ -2.26
GYPB-209ENST00000508618 AKR7LQ8NHP1 331 aa0.94□□□□□ -2.26
GYPB-209ENST00000508618 CMTM2Q8TAZ6 248 aa0.94□□□□□ -2.26
GYPB-209ENST00000508618 OR51E1Q8TCB6 317 aa0.94□□□□□ -2.26
GYPB-209ENST00000508618 PHOSPHO2Q8TCD6 241 aa0.94□□□□□ -2.26
GYPB-209ENST00000508618 YIPF5Q969M3 257 aa0.94□□□□□ -2.26
GYPB-209ENST00000508618 ECHDC3Q96DC8 303 aa0.94□□□□□ -2.26
GYPB-209ENST00000508618 CHP1Q99653 195 aa0.94□□□□□ -2.26
GYPB-209ENST00000508618 SHANK2-AS3Q9BTD1 123 aa0.94□□□□□ -2.26
GYPB-209ENST00000508618 ACTR3CQ9C0K3 210 aaPredicted RBP0.94□□□□□ -2.26
GYPB-209ENST00000508618 SLIRPQ9GZT3 109 aaKnown RBP0.94□□□□□ -2.26
GYPB-209ENST00000508618 PIGUQ9H490 435 aa0.94□□□□□ -2.26
GYPB-209ENST00000508618 TMEM38AQ9H6F2 299 aa0.94□□□□□ -2.26
GYPB-209ENST00000508618 RRAGDQ9NQL2 400 aaPredicted RBP0.94□□□□□ -2.26
GYPB-209ENST00000508618 TREX1Q9NSU2 369 aa0.94□□□□□ -2.26
GYPB-209ENST00000508618 SLC39A1Q9NY26 324 aa0.94□□□□□ -2.26
GYPB-209ENST00000508618 CLN8Q9UBY8 286 aa0.94□□□□□ -2.26
GYPB-209ENST00000508618 HPCAL4Q9UM19 191 aa0.94□□□□□ -2.26
GYPB-209ENST00000508618 PCDH11XQ9BZA7 1347 aa0.93□□□□□ -2.26
GYPB-209ENST00000508618 KCNE1BA0A087WTH5 132 aa0.93□□□□□ -2.26
GYPB-209ENST00000508618 SMIM26A0A096LP01 95 aa0.93□□□□□ -2.26
GYPB-209ENST00000508618 KBTBD11-OT1A0A1B0GTJ5 212 aa0.93□□□□□ -2.26
GYPB-209ENST00000508618 TSPAN11A1L157 253 aa0.93□□□□□ -2.26
GYPB-209ENST00000508618 CEACAM18A8MTB9 384 aa0.93□□□□□ -2.26
GYPB-209ENST00000508618 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP0.93□□□□□ -2.26
GYPB-209ENST00000508618 RNF13O43567 381 aa0.93□□□□□ -2.26
GYPB-209ENST00000508618 CACNG3O60359 315 aa0.93□□□□□ -2.26
GYPB-209ENST00000508618 FSTL3O95633 263 aa0.93□□□□□ -2.26
GYPB-209ENST00000508618 INAFM2P0DMQ5 153 aa0.93□□□□□ -2.26
GYPB-209ENST00000508618 RAB5AP20339 215 aa0.93□□□□□ -2.26
GYPB-209ENST00000508618 CALRP27797 417 aaKnown RBP0.93□□□□□ -2.26
GYPB-209ENST00000508618 APLNRP35414 380 aa0.93□□□□□ -2.26
GYPB-209ENST00000508618 FABP6P51161 128 aa0.93□□□□□ -2.26
GYPB-209ENST00000508618 PRMT2P55345 433 aa0.93□□□□□ -2.26
GYPB-209ENST00000508618 TAS2R46P59540 309 aa0.93□□□□□ -2.26
GYPB-209ENST00000508618 HMGN5P82970 282 aaKnown RBP0.93□□□□□ -2.26
GYPB-209ENST00000508618 CYP24A1Q07973 514 aa0.93□□□□□ -2.26
GYPB-209ENST00000508618 SELENBP1Q13228 472 aa0.93□□□□□ -2.26
GYPB-209ENST00000508618 FAM53BQ14153 422 aa0.93□□□□□ -2.26
GYPB-209ENST00000508618 IHHQ14623 411 aa0.93□□□□□ -2.26
GYPB-209ENST00000508618 HADHQ16836 314 aaKnown RBP0.93□□□□□ -2.26
GYPB-209ENST00000508618 ZNF829Q3KNS6 432 aaPredicted RBP0.93□□□□□ -2.26
GYPB-209ENST00000508618 TMEM69Q5SWH9 247 aa0.93□□□□□ -2.26
GYPB-209ENST00000508618 MRPL2Q5T653 305 aaKnown RBP0.93□□□□□ -2.26
GYPB-209ENST00000508618 FAM104BQ5XKR9 115 aa0.93□□□□□ -2.26
GYPB-209ENST00000508618 METAP1DQ6UB28 335 aaPredicted RBP0.93□□□□□ -2.26
GYPB-209ENST00000508618 WDR82Q6UXN9 313 aa0.93□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms