RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 FADS2O95864 444 aaKnown RBP4.74□□□□□ -1.65
HMGB1P44-201ENST00000508597 HLA-HP01893 362 aa4.74□□□□□ -1.65
HMGB1P44-201ENST00000508597 CRYAAP02489 173 aa4.74□□□□□ -1.65
HMGB1P44-201ENST00000508597 TFP02787 698 aa4.74□□□□□ -1.65
HMGB1P44-201ENST00000508597 OR2T7P0C7T2 308 aa4.74□□□□□ -1.65
HMGB1P44-201ENST00000508597 RNF224P0DH78 156 aa4.74□□□□□ -1.65
HMGB1P44-201ENST00000508597 CD79AP11912 226 aa4.74□□□□□ -1.65
HMGB1P44-201ENST00000508597 ZNF14P17017 642 aaPredicted RBP4.74□□□□□ -1.65
HMGB1P44-201ENST00000508597 ZNF32P17041 273 aa4.74□□□□□ -1.65
HMGB1P44-201ENST00000508597 MYF6P23409 242 aa4.74□□□□□ -1.65
HMGB1P44-201ENST00000508597 PCSK6P29122 969 aa4.74□□□□□ -1.65
HMGB1P44-201ENST00000508597 CDAP32320 146 aa4.74□□□□□ -1.65
HMGB1P44-201ENST00000508597 DCTDP32321 178 aa4.74□□□□□ -1.65
HMGB1P44-201ENST00000508597 PYCR1P32322 319 aa4.74□□□□□ -1.65
HMGB1P44-201ENST00000508597 APLNRP35414 380 aa4.74□□□□□ -1.65
HMGB1P44-201ENST00000508597 ATP6V1E1P36543 226 aa4.74□□□□□ -1.65
HMGB1P44-201ENST00000508597 SLC15A1P46059 708 aa4.74□□□□□ -1.65
HMGB1P44-201ENST00000508597 CAPZA2P47755 286 aa4.74□□□□□ -1.65
HMGB1P44-201ENST00000508597 MTNR1AP48039 350 aa4.74□□□□□ -1.65
HMGB1P44-201ENST00000508597 RGS6P49758 472 aa4.74□□□□□ -1.65
HMGB1P44-201ENST00000508597 GRB2P62993 217 aaKnown RBP4.74□□□□□ -1.65
HMGB1P44-201ENST00000508597 ACTC1P68032 377 aa4.74□□□□□ -1.65
HMGB1P44-201ENST00000508597 ACTA1P68133 377 aa4.74□□□□□ -1.65
HMGB1P44-201ENST00000508597 PSG4Q00888 419 aa4.74□□□□□ -1.65
HMGB1P44-201ENST00000508597 RAB40BQ12829 278 aa4.74□□□□□ -1.65
HMGB1P44-201ENST00000508597 MED21Q13503 144 aa4.74□□□□□ -1.65
HMGB1P44-201ENST00000508597 APOFQ13790 326 aa4.74□□□□□ -1.65
HMGB1P44-201ENST00000508597 ENDOGQ14249 297 aaKnown RBP4.74□□□□□ -1.65
HMGB1P44-201ENST00000508597 RAB35Q15286 201 aa4.74□□□□□ -1.65
HMGB1P44-201ENST00000508597 TSC22D1Q15714 1073 aa4.74□□□□□ -1.65
HMGB1P44-201ENST00000508597 NCMAPQ5T1S8 102 aa4.74□□□□□ -1.65
HMGB1P44-201ENST00000508597 SLC18B1Q6NT16 456 aa4.74□□□□□ -1.65
HMGB1P44-201ENST00000508597 KCTD18Q6PI47 426 aaPredicted RBP4.74□□□□□ -1.65
HMGB1P44-201ENST00000508597 IZUMO2Q6UXV1 221 aa4.74□□□□□ -1.65
HMGB1P44-201ENST00000508597 MDP1Q86V88 176 aa4.74□□□□□ -1.65
HMGB1P44-201ENST00000508597 TIGD4Q8IY51 512 aa4.74□□□□□ -1.65
HMGB1P44-201ENST00000508597 ENTHD1Q8IYW4 607 aa4.74□□□□□ -1.65
HMGB1P44-201ENST00000508597 LRRC18Q8N456 261 aa4.74□□□□□ -1.65
HMGB1P44-201ENST00000508597 OR4F15Q8NGB8 312 aa4.74□□□□□ -1.65
HMGB1P44-201ENST00000508597 OR9Q1Q8NGQ5 310 aa4.74□□□□□ -1.65
HMGB1P44-201ENST00000508597 OR2T27Q8NH04 317 aa4.74□□□□□ -1.65
HMGB1P44-201ENST00000508597 OR52N5Q8NH56 324 aa4.74□□□□□ -1.65
HMGB1P44-201ENST00000508597 OTOSQ8NHW6 89 aa4.74□□□□□ -1.65
HMGB1P44-201ENST00000508597 LINC01560Q8TB33 94 aa4.74□□□□□ -1.65
HMGB1P44-201ENST00000508597 SPTSSAQ969W0 71 aa4.74□□□□□ -1.65
HMGB1P44-201ENST00000508597 FBXO17Q96EF6 278 aa4.74□□□□□ -1.65
HMGB1P44-201ENST00000508597 C14orf79Q96F83 325 aa4.74□□□□□ -1.65
HMGB1P44-201ENST00000508597 MRPL48Q96GC5 212 aaKnown RBP4.74□□□□□ -1.65
HMGB1P44-201ENST00000508597 ZNF75AQ96N20 296 aa4.74□□□□□ -1.65
HMGB1P44-201ENST00000508597 ZNF582Q96NG8 517 aaPredicted RBP4.74□□□□□ -1.65
HMGB1P44-201ENST00000508597 CNN2Q99439 309 aaKnown RBP4.74□□□□□ -1.65
HMGB1P44-201ENST00000508597 COQ7Q99807 217 aa4.74□□□□□ -1.65
HMGB1P44-201ENST00000508597 SH3GL3Q99963 347 aa4.74□□□□□ -1.65
HMGB1P44-201ENST00000508597 KCNS3Q9BQ31 491 aa4.74□□□□□ -1.65
HMGB1P44-201ENST00000508597 HCAR1Q9BXC0 346 aa4.74□□□□□ -1.65
HMGB1P44-201ENST00000508597 ANKRD60Q9BZ19 345 aa4.74□□□□□ -1.65
HMGB1P44-201ENST00000508597 OR2H1Q9GZK4 316 aa4.74□□□□□ -1.65
HMGB1P44-201ENST00000508597 SP140LQ9H930 580 aa4.74□□□□□ -1.65
HMGB1P44-201ENST00000508597 WDR76Q9H967 626 aa4.74□□□□□ -1.65
HMGB1P44-201ENST00000508597 PLCXD1Q9NUJ7 323 aa4.74□□□□□ -1.65
HMGB1P44-201ENST00000508597 MRPL22Q9NWU5 206 aaKnown RBP4.74□□□□□ -1.65
HMGB1P44-201ENST00000508597 PLEK2Q9NYT0 353 aa4.74□□□□□ -1.65
HMGB1P44-201ENST00000508597 ZNF224Q9NZL3 707 aa4.74□□□□□ -1.65
HMGB1P44-201ENST00000508597 CNOT2Q9NZN8 540 aaKnown RBP4.74□□□□□ -1.65
HMGB1P44-201ENST00000508597 PLEKHB1Q9UF11 243 aaPredicted RBP4.74□□□□□ -1.65
HMGB1P44-201ENST00000508597 FBXO9Q9UK97 447 aaPredicted RBP4.74□□□□□ -1.65
HMGB1P44-201ENST00000508597 COMMD3-BMI1R4GMX3 469 aa4.74□□□□□ -1.65
HMGB1P44-201ENST00000508597 AKAP6Q13023 2319 aa4.74□□□□□ -1.65
HMGB1P44-201ENST00000508597 NBPF19A0A087WUL8 3843 aa4.73□□□□□ -1.65
HMGB1P44-201ENST00000508597 CACNA1DQ01668 2161 aa4.73□□□□□ -1.65
HMGB1P44-201ENST00000508597 A1L4Q6 167 aa4.73□□□□□ -1.65
HMGB1P44-201ENST00000508597 EFCAB10A6NFE3 127 aa4.73□□□□□ -1.65
HMGB1P44-201ENST00000508597 TVP23AA6NH52 213 aa4.73□□□□□ -1.65
HMGB1P44-201ENST00000508597 ACOD1A6NK06 481 aa4.73□□□□□ -1.65
HMGB1P44-201ENST00000508597 A6NNC1 897 aa4.73□□□□□ -1.65
HMGB1P44-201ENST00000508597 ZNF878C9JN71 531 aa4.73□□□□□ -1.65
HMGB1P44-201ENST00000508597 H3BSA7 217 aa4.73□□□□□ -1.65
HMGB1P44-201ENST00000508597 C19orf84I3L1E1 186 aa4.73□□□□□ -1.65
HMGB1P44-201ENST00000508597 SYNGR3O43761 229 aa4.73□□□□□ -1.65
HMGB1P44-201ENST00000508597 DOK2O60496 412 aa4.73□□□□□ -1.65
HMGB1P44-201ENST00000508597 ENTPD6O75354 484 aa4.73□□□□□ -1.65
HMGB1P44-201ENST00000508597 WBP4O75554 376 aaKnown RBP4.73□□□□□ -1.65
HMGB1P44-201ENST00000508597 SEC14L2O76054 403 aa4.73□□□□□ -1.65
HMGB1P44-201ENST00000508597 MPZL1O95297 269 aa4.73□□□□□ -1.65
HMGB1P44-201ENST00000508597 GYPBP06028 91 aa4.73□□□□□ -1.65
HMGB1P44-201ENST00000508597 LYNP07948 512 aa4.73□□□□□ -1.65
HMGB1P44-201ENST00000508597 RPSAP08865 295 aaKnown RBP4.73□□□□□ -1.65
HMGB1P44-201ENST00000508597 SBK2P0C263 348 aa4.73□□□□□ -1.65
HMGB1P44-201ENST00000508597 CCDC159P0C7I6 412 aa4.73□□□□□ -1.65
HMGB1P44-201ENST00000508597 CECR9P0C854 216 aa4.73□□□□□ -1.65
HMGB1P44-201ENST00000508597 CLUP10909 449 aa4.73□□□□□ -1.65
HMGB1P44-201ENST00000508597 PIPP12273 146 aaPredicted RBP4.73□□□□□ -1.65
HMGB1P44-201ENST00000508597 ALOX5APP20292 161 aa4.73□□□□□ -1.65
HMGB1P44-201ENST00000508597 STOMP27105 288 aa4.73□□□□□ -1.65
HMGB1P44-201ENST00000508597 DCKP27707 260 aa4.73□□□□□ -1.65
HMGB1P44-201ENST00000508597 SSTR2P30874 369 aa4.73□□□□□ -1.65
HMGB1P44-201ENST00000508597 RAD52P43351 418 aa4.73□□□□□ -1.65
HMGB1P44-201ENST00000508597 GDI2P50395 445 aaKnown RBP4.73□□□□□ -1.65
HMGB1P44-201ENST00000508597 TPTEP56180 551 aa4.73□□□□□ -1.65
HMGB1P44-201ENST00000508597 RPS23P62266 143 aaKnown RBP4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms