RNA–Protein interactions for RNA: ENST00000508017.5

SNCAIP-209, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,410 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-209ENST00000508017 NPIPA5E9PKD4 350 aa11.91□□□□□ -0.5
SNCAIP-209ENST00000508017 PRAMEF26H0Y7S4 382 aa11.91□□□□□ -0.5
SNCAIP-209ENST00000508017 ZNF354AO60765 605 aaPredicted RBP11.91□□□□□ -0.5
SNCAIP-209ENST00000508017 LRP3O75074 770 aa11.91□□□□□ -0.5
SNCAIP-209ENST00000508017 SFT2D2O95562 160 aa11.91□□□□□ -0.5
SNCAIP-209ENST00000508017 MPIG6BO95866 241 aa11.91□□□□□ -0.5
SNCAIP-209ENST00000508017 TBPP20226 339 aa11.91□□□□□ -0.5
SNCAIP-209ENST00000508017 ZNF93P35789 620 aaPredicted RBP11.91□□□□□ -0.5
SNCAIP-209ENST00000508017 ID4P47928 161 aa11.91□□□□□ -0.5
SNCAIP-209ENST00000508017 MMP16P51512 607 aa11.91□□□□□ -0.5
SNCAIP-209ENST00000508017 CYCSP99999 105 aaKnown RBP11.91□□□□□ -0.5
SNCAIP-209ENST00000508017 POU3F1Q03052 451 aaPredicted RBP11.91□□□□□ -0.5
SNCAIP-209ENST00000508017 RAB32Q13637 225 aa11.91□□□□□ -0.5
SNCAIP-209ENST00000508017 ELAVL1Q15717 326 aaKnown RBP11.91□□□□□ -0.5
SNCAIP-209ENST00000508017 DMRTC1Q5HYR2 192 aa11.91□□□□□ -0.5
SNCAIP-209ENST00000508017 HLA-DQA1Q5Y7H0 255 aa11.91□□□□□ -0.5
SNCAIP-209ENST00000508017 DRAM2Q6UX65 266 aa11.91□□□□□ -0.5
SNCAIP-209ENST00000508017 C16orf47Q6ZP98 133 aaPredicted RBP11.91□□□□□ -0.5
SNCAIP-209ENST00000508017 PGAP1Q75T13 922 aa11.91□□□□□ -0.5
SNCAIP-209ENST00000508017 GRINAQ7Z429 371 aa11.91□□□□□ -0.5
SNCAIP-209ENST00000508017 ADAMTS17Q8TE56 1095 aa11.91□□□□□ -0.5
SNCAIP-209ENST00000508017 EMC6Q9BV81 110 aa11.91□□□□□ -0.5
SNCAIP-209ENST00000508017 WWTR1Q9GZV5 400 aa11.91□□□□□ -0.5
SNCAIP-209ENST00000508017 SLC22A11Q9NSA0 550 aa11.91□□□□□ -0.5
SNCAIP-209ENST00000508017 NPIPA1Q9UND3 350 aa11.91□□□□□ -0.5
SNCAIP-209ENST00000508017 IGKV3D-11A0A0A0MRZ8 115 aa11.91□□□□□ -0.5
SNCAIP-209ENST00000508017 A0A1W2PQD3 144 aa11.91□□□□□ -0.5
SNCAIP-209ENST00000508017 NUDT19A8MXV4 375 aa11.91□□□□□ -0.5
SNCAIP-209ENST00000508017 EIF3GO75821 320 aaKnown RBP eCLIP11.91□□□□□ -0.5
SNCAIP-209ENST00000508017 GLAP06280 429 aa11.91□□□□□ -0.5
SNCAIP-209ENST00000508017 SFTA3P0C7M3 94 aa11.91□□□□□ -0.5
SNCAIP-209ENST00000508017 NME2P22392 152 aa11.91□□□□□ -0.5
SNCAIP-209ENST00000508017 OR3A4PP47883 348 aa11.91□□□□□ -0.5
SNCAIP-209ENST00000508017 SLC6A9P48067 706 aa11.91□□□□□ -0.5
SNCAIP-209ENST00000508017 TDGQ13569 410 aa11.91□□□□□ -0.5
SNCAIP-209ENST00000508017 AKIRIN2Q53H80 203 aa11.91□□□□□ -0.5
SNCAIP-209ENST00000508017 RPL7L1Q6DKI1 246 aaKnown RBP11.91□□□□□ -0.5
SNCAIP-209ENST00000508017 GLIPR1L1Q6UWM5 242 aa11.91□□□□□ -0.5
SNCAIP-209ENST00000508017 OR51E1Q8TCB6 317 aa11.91□□□□□ -0.5
SNCAIP-209ENST00000508017 C11orf40Q8WZ69 217 aa11.91□□□□□ -0.5
SNCAIP-209ENST00000508017 KCNK17Q96T54 332 aa11.91□□□□□ -0.5
SNCAIP-209ENST00000508017 UQCC2Q9BRT2 126 aa11.91□□□□□ -0.5
SNCAIP-209ENST00000508017 CRB3Q9BUF7 120 aa11.91□□□□□ -0.5
SNCAIP-209ENST00000508017 SLC5A7Q9GZV3 580 aa11.91□□□□□ -0.5
SNCAIP-209ENST00000508017 DUSP15Q9H1R2 295 aaPredicted RBP11.91□□□□□ -0.5
SNCAIP-209ENST00000508017 HTR3BO95264 441 aa11.9□□□□□ -0.5
SNCAIP-209ENST00000508017 AKR1C3P42330 323 aa11.9□□□□□ -0.5
SNCAIP-209ENST00000508017 CAV2P51636 162 aa11.9□□□□□ -0.5
SNCAIP-209ENST00000508017 FOXL2P58012 376 aa11.9□□□□□ -0.5
SNCAIP-209ENST00000508017 FOXK1P85037 733 aa11.9□□□□□ -0.5
SNCAIP-209ENST00000508017 FOXRED2Q8IWF2 684 aa11.9□□□□□ -0.5
SNCAIP-209ENST00000508017 ZNF248Q8NDW4 579 aa11.9□□□□□ -0.5
SNCAIP-209ENST00000508017 RAB3CQ96E17 227 aa11.9□□□□□ -0.5
SNCAIP-209ENST00000508017 TMEM41AQ96HV5 264 aa11.9□□□□□ -0.5
SNCAIP-209ENST00000508017 AQP10Q96PS8 301 aa11.9□□□□□ -0.5
SNCAIP-209ENST00000508017 CDC6Q99741 560 aa11.9□□□□□ -0.5
SNCAIP-209ENST00000508017 RTBDNQ9BSG5 229 aaPredicted RBP11.9□□□□□ -0.5
SNCAIP-209ENST00000508017 RAB18Q9NP72 206 aa11.9□□□□□ -0.5
SNCAIP-209ENST00000508017 DZANK1Q9NVP4 752 aa11.9□□□□□ -0.5
SNCAIP-209ENST00000508017 PLA2G2EQ9NZK7 142 aa11.9□□□□□ -0.5
SNCAIP-209ENST00000508017 COL5A1P20908 1838 aaPredicted RBP11.9□□□□□ -0.5
SNCAIP-209ENST00000508017 COLCA2A8K830 154 aa11.9□□□□□ -0.5
SNCAIP-209ENST00000508017 RNASEK-C17orf49H0YIS7 233 aa11.9□□□□□ -0.5
SNCAIP-209ENST00000508017 SDCBPO00560 298 aaPredicted RBP11.9□□□□□ -0.5
SNCAIP-209ENST00000508017 MED6O75586 246 aa11.9□□□□□ -0.5
SNCAIP-209ENST00000508017 SERPINA5P05154 406 aa11.9□□□□□ -0.5
SNCAIP-209ENST00000508017 HEXAP06865 529 aa11.9□□□□□ -0.5
SNCAIP-209ENST00000508017 ACAA1P09110 424 aaPredicted RBP11.9□□□□□ -0.5
SNCAIP-209ENST00000508017 SLC2A1P11166 492 aa11.9□□□□□ -0.5
SNCAIP-209ENST00000508017 LYL1P12980 280 aa11.9□□□□□ -0.5
SNCAIP-209ENST00000508017 PTGFRP43088 359 aa11.9□□□□□ -0.5
SNCAIP-209ENST00000508017 TMEM50BP56557 158 aa11.9□□□□□ -0.5
SNCAIP-209ENST00000508017 S100A10P60903 97 aa11.9□□□□□ -0.5
SNCAIP-209ENST00000508017 SMAD2Q15796 467 aaKnown RBP11.9□□□□□ -0.5
SNCAIP-209ENST00000508017 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.9□□□□□ -0.5
SNCAIP-209ENST00000508017 DNM1P34Q6PK57 102 aa11.9□□□□□ -0.5
SNCAIP-209ENST00000508017 DEGS2Q6QHC5 323 aa11.9□□□□□ -0.5
SNCAIP-209ENST00000508017 OR5D14Q8NGL3 314 aa11.9□□□□□ -0.5
SNCAIP-209ENST00000508017 OR13G1Q8NGZ3 307 aa11.9□□□□□ -0.5
SNCAIP-209ENST00000508017 SMIM8Q96KF7 97 aa11.9□□□□□ -0.5
SNCAIP-209ENST00000508017 C1orf147Q96MC9 270 aaPredicted RBP11.9□□□□□ -0.5
SNCAIP-209ENST00000508017 NUDT22Q9BRQ3 303 aa11.9□□□□□ -0.5
SNCAIP-209ENST00000508017 METTL8Q9H825 291 aaKnown RBP11.9□□□□□ -0.5
SNCAIP-209ENST00000508017 CUTCQ9NTM9 273 aa11.9□□□□□ -0.5
SNCAIP-209ENST00000508017 GSKIPQ9P0R6 139 aa11.9□□□□□ -0.5
SNCAIP-209ENST00000508017 MRPS28Q9Y2Q9 187 aaKnown RBP11.9□□□□□ -0.5
SNCAIP-209ENST00000508017 PCDHGA1Q9Y5H4 931 aa11.9□□□□□ -0.5
SNCAIP-209ENST00000508017 A6NIZ1 184 aa11.89□□□□□ -0.51
SNCAIP-209ENST00000508017 PRSS44E7EML9 344 aa11.89□□□□□ -0.51
SNCAIP-209ENST00000508017 ADAM10O14672 748 aa11.89□□□□□ -0.51
SNCAIP-209ENST00000508017 APOC1P02654 83 aa11.89□□□□□ -0.51
SNCAIP-209ENST00000508017 CSTBP04080 98 aaKnown RBP11.89□□□□□ -0.51
SNCAIP-209ENST00000508017 HOXB5P09067 269 aa11.89□□□□□ -0.51
SNCAIP-209ENST00000508017 HIST1H1DP16402 221 aaKnown RBP11.89□□□□□ -0.51
SNCAIP-209ENST00000508017 GPR85P60893 370 aa11.89□□□□□ -0.51
SNCAIP-209ENST00000508017 RAP1BP61224 184 aa11.89□□□□□ -0.51
SNCAIP-209ENST00000508017 RAP1AP62834 184 aa11.89□□□□□ -0.51
SNCAIP-209ENST00000508017 HABP2Q14520 560 aaPredicted RBP11.89□□□□□ -0.51
SNCAIP-209ENST00000508017 VAX1Q5SQQ9 334 aa11.89□□□□□ -0.51
SNCAIP-209ENST00000508017 C9orf50Q5SZB4 431 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 120.1 ms