RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 RPH3AQ9Y2J0 694 aaPredicted RBP15.78■□□□□ 0.12
NUP54-205ENST00000507257 ALPK2Q86TB3 2170 aa15.78■□□□□ 0.12
NUP54-205ENST00000507257 C7orf77A4D0Y5 90 aa15.77■□□□□ 0.12
NUP54-205ENST00000507257 A8MVM7 634 aa15.77■□□□□ 0.12
NUP54-205ENST00000507257 RAB5AP20339 215 aa15.77■□□□□ 0.12
NUP54-205ENST00000507257 ACKR3P25106 362 aa15.77■□□□□ 0.12
NUP54-205ENST00000507257 GPM6BQ13491 265 aa15.77■□□□□ 0.12
NUP54-205ENST00000507257 TDGQ13569 410 aa15.77■□□□□ 0.12
NUP54-205ENST00000507257 RHEBQ15382 184 aa15.77■□□□□ 0.12
NUP54-205ENST00000507257 SLC9A3R2Q15599 337 aa15.77■□□□□ 0.12
NUP54-205ENST00000507257 Q6ZRG5 221 aa15.77■□□□□ 0.12
NUP54-205ENST00000507257 UBAC2Q8NBM4 344 aa15.77■□□□□ 0.12
NUP54-205ENST00000507257 OR51F2Q8NH61 342 aa15.77■□□□□ 0.12
NUP54-205ENST00000507257 GPBAR1Q8TDU6 330 aa15.77■□□□□ 0.12
NUP54-205ENST00000507257 GABRG3Q99928 467 aa15.77■□□□□ 0.12
NUP54-205ENST00000507257 CNTNAP3Q9BZ76 1288 aa15.77■□□□□ 0.12
NUP54-205ENST00000507257 METTL8Q9H825 291 aaKnown RBP15.77■□□□□ 0.12
NUP54-205ENST00000507257 ALG1L2C9J202 215 aa15.76■□□□□ 0.11
NUP54-205ENST00000507257 H0Y8X5 98 aa15.76■□□□□ 0.11
NUP54-205ENST00000507257 AP4M1O00189 453 aa15.76■□□□□ 0.11
NUP54-205ENST00000507257 HCRTR2O43614 444 aa15.76■□□□□ 0.11
NUP54-205ENST00000507257 HTR3BO95264 441 aa15.76■□□□□ 0.11
NUP54-205ENST00000507257 TTRP02766 147 aa15.76■□□□□ 0.11
NUP54-205ENST00000507257 OR8U8P0C7N1 319 aa15.76■□□□□ 0.11
NUP54-205ENST00000507257 ZNF14P17017 642 aaPredicted RBP15.76■□□□□ 0.11
NUP54-205ENST00000507257 ZP4Q12836 540 aa15.76■□□□□ 0.11
NUP54-205ENST00000507257 EBPQ15125 230 aaKnown RBP15.76■□□□□ 0.11
NUP54-205ENST00000507257 DEFB110Q30KQ9 67 aa15.76■□□□□ 0.11
NUP54-205ENST00000507257 AWAT1Q58HT5 328 aa15.76■□□□□ 0.11
NUP54-205ENST00000507257 C1orf140Q5VVS0 124 aa15.76■□□□□ 0.11
NUP54-205ENST00000507257 OR5H2Q8NGV7 314 aa15.76■□□□□ 0.11
NUP54-205ENST00000507257 KCNG3Q8TAE7 436 aa15.76■□□□□ 0.11
NUP54-205ENST00000507257 EMG1Q92979 244 aaKnown RBP15.76■□□□□ 0.11
NUP54-205ENST00000507257 SLC25A36Q96CQ1 311 aa15.76■□□□□ 0.11
NUP54-205ENST00000507257 RAB3CQ96E17 227 aa15.76■□□□□ 0.11
NUP54-205ENST00000507257 ADAT3Q96EY9 351 aaPredicted RBP15.76■□□□□ 0.11
NUP54-205ENST00000507257 SCRT1Q9BWW7 348 aa15.76■□□□□ 0.11
NUP54-205ENST00000507257 IL23AQ9NPF7 189 aa15.76■□□□□ 0.11
NUP54-205ENST00000507257 DZANK1Q9NVP4 752 aa15.76■□□□□ 0.11
NUP54-205ENST00000507257 PLA2G2EQ9NZK7 142 aa15.76■□□□□ 0.11
NUP54-205ENST00000507257 A0A0A6YYD4 124 aa15.76■□□□□ 0.11
NUP54-205ENST00000507257 A0A1W2PPE3 182 aa15.76■□□□□ 0.11
NUP54-205ENST00000507257 C17orf105B2RV13 164 aa15.76■□□□□ 0.11
NUP54-205ENST00000507257 H2BFMP0C1H6 154 aa15.76■□□□□ 0.11
NUP54-205ENST00000507257 ZNF708P17019 499 aa15.76■□□□□ 0.11
NUP54-205ENST00000507257 HNRNPA2B1P22626 353 aaKnown RBP15.76■□□□□ 0.11
NUP54-205ENST00000507257 SNCAP37840 140 aa15.76■□□□□ 0.11
NUP54-205ENST00000507257 NPY4RP50391 375 aa15.76■□□□□ 0.11
NUP54-205ENST00000507257 ZNF84P51523 738 aa15.76■□□□□ 0.11
NUP54-205ENST00000507257 P2RY4P51582 365 aa15.76■□□□□ 0.11
NUP54-205ENST00000507257 SUCLG1P53597 346 aaKnown RBP15.76■□□□□ 0.11
NUP54-205ENST00000507257 DCAF7P61962 342 aa15.76■□□□□ 0.11
NUP54-205ENST00000507257 PPP1CAP62136 330 aa15.76■□□□□ 0.11
NUP54-205ENST00000507257 RAB1AP62820 205 aa15.76■□□□□ 0.11
NUP54-205ENST00000507257 ERV3-1Q14264 604 aa15.76■□□□□ 0.11
NUP54-205ENST00000507257 AADACL3Q5VUY0 350 aa15.76■□□□□ 0.11
NUP54-205ENST00000507257 HIST2H2ABQ8IUE6 130 aaPredicted RBP15.76■□□□□ 0.11
NUP54-205ENST00000507257 C12orf76Q8N812 135 aaPredicted RBP15.76■□□□□ 0.11
NUP54-205ENST00000507257 EDARADDQ8WWZ3 215 aa15.76■□□□□ 0.11
NUP54-205ENST00000507257 PATE1Q8WXA2 126 aa15.76■□□□□ 0.11
NUP54-205ENST00000507257 TRIM43Q96BQ3 446 aaPredicted RBP15.76■□□□□ 0.11
NUP54-205ENST00000507257 C1orf147Q96MC9 270 aaPredicted RBP15.76■□□□□ 0.11
NUP54-205ENST00000507257 ZNF285Q96NJ3 590 aa15.76■□□□□ 0.11
NUP54-205ENST00000507257 RNF208Q9H0X6 261 aa15.76■□□□□ 0.11
NUP54-205ENST00000507257 C8orf33Q9H7E9 229 aaPredicted RBP15.76■□□□□ 0.11
NUP54-205ENST00000507257 FAM212BQ9NTI7 297 aaPredicted RBP15.76■□□□□ 0.11
NUP54-205ENST00000507257 TMED7-TICAM2A0A0A6YYA0 188 aa15.75■□□□□ 0.11
NUP54-205ENST00000507257 SYT7O43581 403 aa15.75■□□□□ 0.11
NUP54-205ENST00000507257 FKTNO75072 461 aa15.75■□□□□ 0.11
NUP54-205ENST00000507257 MPZL1O95297 269 aa15.75■□□□□ 0.11
NUP54-205ENST00000507257 OR8U9P0C7N5 309 aa15.75■□□□□ 0.11
NUP54-205ENST00000507257 RPL12P30050 165 aaKnown RBP15.75■□□□□ 0.11
NUP54-205ENST00000507257 NTSR1P30989 418 aa15.75■□□□□ 0.11
NUP54-205ENST00000507257 THBS4P35443 961 aa15.75■□□□□ 0.11
NUP54-205ENST00000507257 ZNF93P35789 620 aaPredicted RBP15.75■□□□□ 0.11
NUP54-205ENST00000507257 ECI1P42126 302 aa15.75■□□□□ 0.11
NUP54-205ENST00000507257 CLDN6P56747 220 aa15.75■□□□□ 0.11
NUP54-205ENST00000507257 TAS2R46P59540 309 aa15.75■□□□□ 0.11
NUP54-205ENST00000507257 PLAC9Q5JTB6 97 aa15.75■□□□□ 0.11
NUP54-205ENST00000507257 PTCRAQ6ISU1 281 aaPredicted RBP15.75■□□□□ 0.11
NUP54-205ENST00000507257 OR9K2Q8NGE7 335 aa15.75■□□□□ 0.11
NUP54-205ENST00000507257 OR8U1Q8NH10 309 aa15.75■□□□□ 0.11
NUP54-205ENST00000507257 SLC37A2Q8TED4 501 aa15.75■□□□□ 0.11
NUP54-205ENST00000507257 SECTM1Q8WVN6 248 aa15.75■□□□□ 0.11
NUP54-205ENST00000507257 ADIPOR1Q96A54 375 aa15.75■□□□□ 0.11
NUP54-205ENST00000507257 RGCCQ9H4X1 137 aa15.75■□□□□ 0.11
NUP54-205ENST00000507257 PTGES2Q9H7Z7 377 aa15.75■□□□□ 0.11
NUP54-205ENST00000507257 MOB1AQ9H8S9 216 aa15.75■□□□□ 0.11
NUP54-205ENST00000507257 TUBD1Q9UJT1 453 aa15.75■□□□□ 0.11
NUP54-205ENST00000507257 DMRT1Q9Y5R6 373 aa15.75■□□□□ 0.11
NUP54-205ENST00000507257 PMS2P1A4D2B8 440 aa15.74■□□□□ 0.11
NUP54-205ENST00000507257 C5orf67F2Z3F1 127 aa15.74■□□□□ 0.11
NUP54-205ENST00000507257 CLN5O75503 358 aa15.74■□□□□ 0.11
NUP54-205ENST00000507257 AHSA1O95433 338 aa15.74■□□□□ 0.11
NUP54-205ENST00000507257 CCL5P13501 91 aa15.74■□□□□ 0.11
NUP54-205ENST00000507257 CBR1P16152 277 aa15.74■□□□□ 0.11
NUP54-205ENST00000507257 LAP3P28838 519 aa15.74■□□□□ 0.11
NUP54-205ENST00000507257 GNALP38405 381 aa15.74■□□□□ 0.11
NUP54-205ENST00000507257 FOXK1P85037 733 aa15.74■□□□□ 0.11
NUP54-205ENST00000507257 EIF3IQ13347 325 aaKnown RBP15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms