RNA–Protein interactions for RNA: ENST00000506779.1

TOPBP1-205, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 536 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-205ENST00000506779 PLPP5Q8NEB5 264 aa1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 OR5L2Q8NGL0 311 aa1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 OR9A2Q8NGT5 310 aa1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 OR9A4Q8NGU2 314 aa1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 OR52P1PQ8NH57 321 aa1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 OR51Q1Q8NH59 317 aa1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 OR5AK3PQ8NH89 298 aa1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 GPR151Q8TDV0 419 aa1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 GIPC3Q8TF64 312 aa1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 TRUB1Q8WWH5 349 aaKnown RBP1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 SLC38A4Q969I6 547 aa1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 MAL2Q969L2 176 aa1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 TMBIM1Q969X1 311 aa1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 RAB39BQ96DA2 213 aa1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 DTNBP1Q96EV8 351 aa1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 RMND5BQ96G75 393 aaPredicted RBP1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 CNBD2Q96M20 576 aa1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 Q96MT0 163 aa1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 COL21A1Q96P44 957 aa1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 OR7D2Q96RA2 312 aa1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 CCNL2Q96S94 520 aaPredicted RBP1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 MYCBPQ99417 103 aaPredicted RBP1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 SPAG8Q99932 426 aaPredicted RBP1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 NDEL1Q9GZM8 345 aa1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 FAM192AQ9GZU8 254 aa1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 GABARAPL1Q9H0R8 117 aa1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 LRRN3Q9H3W5 708 aa1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 IKZF5Q9H5V7 419 aa1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 SP140LQ9H930 580 aa1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 WDR54Q9H977 334 aa1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 CXorf21Q9HAI6 301 aa1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 FAM60AQ9NP50 221 aa1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 ADAP2Q9NPF8 381 aa1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 FBXO8Q9NRD0 319 aa1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 STARD5Q9NSY2 213 aa1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 CUTCQ9NTM9 273 aa1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 SCN3BQ9NY72 215 aa1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 PDP1Q9P0J1 537 aaPredicted RBP1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 COPS7AQ9UBW8 275 aa1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 MGAT4AQ9UM21 535 aa1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 MGAT4BQ9UQ53 548 aa1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 POFUT2Q9Y2G5 429 aa1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 TPRKBQ9Y3C4 175 aa1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 WDR45Q9Y484 360 aa1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 OR10H1Q9Y4A9 318 aa1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 SNX5Q9Y5X3 404 aa1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 AP4B1Q9Y6B7 739 aa1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 ENPP4Q9Y6X5 453 aa1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 C2orf16Q68DN1 1984 aa1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 TRANK1O15050 2925 aa1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 MYO18AQ92614 2054 aaKnown RBP1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 COL6A3P12111 3177 aa1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 ANKRD36A6QL64 1941 aa1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 HCFC1P51610 2035 aa1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 DSPPQ9NZW4 1301 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 CHD9Q3L8U1 2897 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 PKD1L2Q7Z442 2459 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 TICRRQ7Z2Z1 1910 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 IGLV3-12A0A075B6K2 115 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 IGHV3OR16-12A0A075B7B8 117 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 A0A0A6YYD4 124 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 IGHV5-10-1A0A0J9YXX1 117 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 LOC100130705A0A1B0GUX0 176 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 SMIM31A0A1B0GVY4 71 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 IRGMA1A4Y4 181 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 FRG2CA6NGY1 282 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 ZNF860A6NHJ4 632 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 RNF212BA8MTL3 300 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 C9J4A7 227 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 hCG_2039718K7EN88 272 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 PDLIM1O00151 329 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 SH2D1BO14796 132 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 ARPC1BO15143 372 aaKnown RBP1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 FCMRO60667 390 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 NOL3O60936 208 aaKnown RBP1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 GCM2O75603 506 aaPredicted RBP1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 RCBTB2O95199 551 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 OR5F1O95221 314 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 LGI1O95970 557 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 PNPP00491 289 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 IGHV3-9P01782 118 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 STATHP02808 62 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 SEMG1P04279 462 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 HEXBP07686 556 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 FCGR3AP08637 254 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 ZNF806P0C7X5 589 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 GIMD1P0DJR0 217 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 PNMTP11086 282 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 FOLR1P15328 257 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 ZBTB25P24278 435 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 ACP1P24666 158 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 FKBP2P26885 142 aaKnown RBP1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 GABRA3P34903 492 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 RBM34P42696 430 aaKnown RBP1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 PPICP45877 212 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 RPL5P46777 297 aaKnown RBP1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 SLC6A8P48029 635 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 GABRA4P48169 554 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 PITPNBP48739 271 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 TMED10P49755 219 aaKnown RBP1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms