RNA–Protein interactions for RNA: ENST00000505066.5

DDR1-256, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 4

Gene DDR1, Length 556 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-256	ENST00000505066	TVP23A	A6NH52	213 aa		13.65	□□□□□ -0.22
DDR1-256	ENST00000505066	ZNF878	C9JN71	531 aa		13.65	□□□□□ -0.22
DDR1-256	ENST00000505066	ANXA2	P07355	339 aa	Known RBP	13.65	□□□□□ -0.22
DDR1-256	ENST00000505066	ZNF3	P17036	446 aa		13.65	□□□□□ -0.22
DDR1-256	ENST00000505066	PAICS	P22234	425 aa	Known RBP	13.65	□□□□□ -0.22
DDR1-256	ENST00000505066	PRKX	P51817	358 aa		13.65	□□□□□ -0.22
DDR1-256	ENST00000505066	HNRNPA0	Q13151	305 aa	Known RBP	13.65	□□□□□ -0.22
DDR1-256	ENST00000505066	MICB	Q29980	383 aa		13.65	□□□□□ -0.22
DDR1-256	ENST00000505066	KRTAP27-1	Q3LI81	207 aa		13.65	□□□□□ -0.22
DDR1-256	ENST00000505066	PGBD2	Q6P3X8	592 aa		13.65	□□□□□ -0.22
DDR1-256	ENST00000505066	BRD3OS	Q6XYD6	125 aa		13.65	□□□□□ -0.22
DDR1-256	ENST00000505066	HIST2H2AB	Q8IUE6	130 aa	Predicted RBP	13.65	□□□□□ -0.22
DDR1-256	ENST00000505066	CYB561A3	Q8NBI2	242 aa		13.65	□□□□□ -0.22
DDR1-256	ENST00000505066	OR2T33	Q8NG76	320 aa		13.65	□□□□□ -0.22
DDR1-256	ENST00000505066	OTULIN	Q96BN8	352 aa		13.65	□□□□□ -0.22
DDR1-256	ENST00000505066	KCNJ15	Q99712	375 aa		13.65	□□□□□ -0.22
DDR1-256	ENST00000505066	TSSK6	Q9BXA6	273 aa		13.65	□□□□□ -0.22
DDR1-256	ENST00000505066	TOR3A	Q9H497	397 aa		13.65	□□□□□ -0.22
DDR1-256	ENST00000505066	ZNF446	Q9NWS9	450 aa		13.65	□□□□□ -0.22
DDR1-256	ENST00000505066	CD300A	Q9UGN4	299 aa		13.65	□□□□□ -0.22
DDR1-256	ENST00000505066	ANXA2P2	A6NMY6	339 aa		13.64	□□□□□ -0.23
DDR1-256	ENST00000505066	SRRM5	B3KS81	715 aa		13.64	□□□□□ -0.23
DDR1-256	ENST00000505066	ATP8B1	O43520	1251 aa		13.64	□□□□□ -0.23
DDR1-256	ENST00000505066	TIPRL	O75663	272 aa		13.64	□□□□□ -0.23
DDR1-256	ENST00000505066	PRSS12	P56730	875 aa		13.64	□□□□□ -0.23
DDR1-256	ENST00000505066	PAX2	Q02962	417 aa		13.64	□□□□□ -0.23
DDR1-256	ENST00000505066	ZNF92	Q03936	586 aa		13.64	□□□□□ -0.23
DDR1-256	ENST00000505066	DEFB112	Q30KQ8	113 aa		13.64	□□□□□ -0.23
DDR1-256	ENST00000505066	LYPD2	Q6UXB3	125 aa		13.64	□□□□□ -0.23
DDR1-256	ENST00000505066	TREML4	Q6UXN2	200 aa		13.64	□□□□□ -0.23
DDR1-256	ENST00000505066	RASSF6	Q6ZTQ3	369 aa		13.64	□□□□□ -0.23
DDR1-256	ENST00000505066	SLC36A1	Q7Z2H8	476 aa		13.64	□□□□□ -0.23
DDR1-256	ENST00000505066	NAA40	Q86UY6	237 aa		13.64	□□□□□ -0.23
DDR1-256	ENST00000505066	DEFB107A	Q8IZN7	70 aa		13.64	□□□□□ -0.23
DDR1-256	ENST00000505066	OR52H1	Q8NGJ2	320 aa		13.64	□□□□□ -0.23
DDR1-256	ENST00000505066	SLAMF6	Q96DU3	332 aa		13.64	□□□□□ -0.23
DDR1-256	ENST00000505066	MAP6	Q96JE9	813 aa		13.64	□□□□□ -0.23
DDR1-256	ENST00000505066	ZNF48	Q96MX3	618 aa	Predicted RBP	13.64	□□□□□ -0.23
DDR1-256	ENST00000505066	TEX12	Q9BXU0	123 aa		13.64	□□□□□ -0.23
DDR1-256	ENST00000505066	EGLN3	Q9H6Z9	239 aa		13.64	□□□□□ -0.23
DDR1-256	ENST00000505066	REEP1	Q9H902	201 aa		13.64	□□□□□ -0.23
DDR1-256	ENST00000505066	PRPF19	Q9UMS4	504 aa	Known RBP	13.64	□□□□□ -0.23
DDR1-256	ENST00000505066	POMT1	Q9Y6A1	747 aa		13.64	□□□□□ -0.23
DDR1-256	ENST00000505066	ZNF593	O00488	134 aa	Predicted RBP	13.63	□□□□□ -0.23
DDR1-256	ENST00000505066	SNX3	O60493	162 aa		13.63	□□□□□ -0.23
DDR1-256	ENST00000505066	EEF1B2	P24534	225 aa	Known RBP	13.63	□□□□□ -0.23
DDR1-256	ENST00000505066	MSX2	P35548	267 aa	Predicted RBP	13.63	□□□□□ -0.23
DDR1-256	ENST00000505066	CFHR2	P36980	270 aa		13.63	□□□□□ -0.23
DDR1-256	ENST00000505066	RBMX	P38159	391 aa	Known RBP	13.63	□□□□□ -0.23
DDR1-256	ENST00000505066	PSMB10	P40306	273 aa		13.63	□□□□□ -0.23
DDR1-256	ENST00000505066	PMEL	P40967	661 aa		13.63	□□□□□ -0.23
DDR1-256	ENST00000505066	RAG2	P55895	527 aa		13.63	□□□□□ -0.23
DDR1-256	ENST00000505066	RPL15	P61313	204 aa	Known RBP	13.63	□□□□□ -0.23
DDR1-256	ENST00000505066	MPPED2	Q15777	294 aa		13.63	□□□□□ -0.23
DDR1-256	ENST00000505066	RSPO1	Q2MKA7	263 aa	Predicted RBP	13.63	□□□□□ -0.23
DDR1-256	ENST00000505066	FAM98B	Q52LJ0	330 aa	Known RBP	13.63	□□□□□ -0.23
DDR1-256	ENST00000505066	GLYATL3	Q5SZD4	288 aa		13.63	□□□□□ -0.23
DDR1-256	ENST00000505066	FIP1L1	Q6UN15	594 aa	Known RBP	13.63	□□□□□ -0.23
DDR1-256	ENST00000505066	DPY19L4	Q7Z388	723 aa		13.63	□□□□□ -0.23
DDR1-256	ENST00000505066	C19orf18	Q8NEA5	215 aa		13.63	□□□□□ -0.23
DDR1-256	ENST00000505066	OR56B2P	Q8NGI1	322 aa		13.63	□□□□□ -0.23
DDR1-256	ENST00000505066	OR51L1	Q8NGJ5	315 aa		13.63	□□□□□ -0.23
DDR1-256	ENST00000505066	OR9Q1	Q8NGQ5	310 aa		13.63	□□□□□ -0.23
DDR1-256	ENST00000505066	OR2AE1	Q8NHA4	323 aa		13.63	□□□□□ -0.23
DDR1-256	ENST00000505066	TEX47	Q8TBZ9	253 aa		13.63	□□□□□ -0.23
DDR1-256	ENST00000505066	LRTOMT	Q8WZ04	291 aa		13.63	□□□□□ -0.23
DDR1-256	ENST00000505066	ST8SIA4	Q92187	359 aa		13.63	□□□□□ -0.23
DDR1-256	ENST00000505066	LRGUK	Q96M69	825 aa		13.63	□□□□□ -0.23
DDR1-256	ENST00000505066	WDFY2	Q96P53	400 aa		13.63	□□□□□ -0.23
DDR1-256	ENST00000505066	HIST1H2AA	Q96QV6	131 aa		13.63	□□□□□ -0.23
DDR1-256	ENST00000505066	CCT8L2	Q96SF2	557 aa		13.63	□□□□□ -0.23
DDR1-256	ENST00000505066	MICU1	Q9BPX6	476 aa		13.63	□□□□□ -0.23
DDR1-256	ENST00000505066	OR10A2	Q9H208	303 aa		13.63	□□□□□ -0.23
DDR1-256	ENST00000505066	DPAGT1	Q9H3H5	408 aa		13.63	□□□□□ -0.23
DDR1-256	ENST00000505066	MUC13	Q9H3R2	512 aa		13.63	□□□□□ -0.23
DDR1-256	ENST00000505066	MARCH7	Q9H992	704 aa		13.63	□□□□□ -0.23
DDR1-256	ENST00000505066	MRPL22	Q9NWU5	206 aa	Known RBP	13.63	□□□□□ -0.23
DDR1-256	ENST00000505066	ARL2BP	Q9Y2Y0	163 aa		13.63	□□□□□ -0.23
DDR1-256	ENST00000505066	MMP24	Q9Y5R2	645 aa		13.63	□□□□□ -0.23
DDR1-256	ENST00000505066	DYSF	O75923	2080 aa		13.63	□□□□□ -0.23
DDR1-256	ENST00000505066	FAM181B	A6NEQ2	426 aa		13.62	□□□□□ -0.23
DDR1-256	ENST00000505066		M0QZ24	198 aa		13.62	□□□□□ -0.23
DDR1-256	ENST00000505066	GYPA	P02724	150 aa		13.62	□□□□□ -0.23
DDR1-256	ENST00000505066	SEMG1	P04279	462 aa		13.62	□□□□□ -0.23
DDR1-256	ENST00000505066	OMG	P23515	440 aa		13.62	□□□□□ -0.23
DDR1-256	ENST00000505066	IL5RA	Q01344	420 aa		13.62	□□□□□ -0.23
DDR1-256	ENST00000505066	EIF2B1	Q14232	305 aa	Known RBP	13.62	□□□□□ -0.23
DDR1-256	ENST00000505066	SNAI3	Q3KNW1	292 aa		13.62	□□□□□ -0.23
DDR1-256	ENST00000505066	SHF	Q7M4L6	423 aa		13.62	□□□□□ -0.23
DDR1-256	ENST00000505066	ARHGAP24	Q8N264	748 aa		13.62	□□□□□ -0.23
DDR1-256	ENST00000505066	AQP11	Q8NBQ7	271 aa		13.62	□□□□□ -0.23
DDR1-256	ENST00000505066	SLC37A3	Q8NCC5	494 aa		13.62	□□□□□ -0.23
DDR1-256	ENST00000505066	CSNK2A3	Q8NEV1	391 aa		13.62	□□□□□ -0.23
DDR1-256	ENST00000505066	RNPEPL1	Q9HAU8	725 aa		13.62	□□□□□ -0.23
DDR1-256	ENST00000505066	ABCB9	Q9NP78	766 aa		13.62	□□□□□ -0.23
DDR1-256	ENST00000505066	PNRC2	Q9NPJ4	139 aa	Known RBP	13.62	□□□□□ -0.23
DDR1-256	ENST00000505066	ACOXL	Q9NUZ1	547 aa		13.62	□□□□□ -0.23
DDR1-256	ENST00000505066	IL20	Q9NYY1	176 aa		13.62	□□□□□ -0.23
DDR1-256	ENST00000505066	ACTR3B	Q9P1U1	418 aa		13.62	□□□□□ -0.23
DDR1-256	ENST00000505066	DNAJB11	Q9UBS4	358 aa		13.62	□□□□□ -0.23

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