RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 DPF1Q92782 380 aa12.84□□□□□ -0.35
PDLIM7-210ENST00000503827 SYT4Q9H2B2 425 aa12.84□□□□□ -0.35
PDLIM7-210ENST00000503827 C14orf119Q9NWQ9 140 aa12.84□□□□□ -0.35
PDLIM7-210ENST00000503827 PCDHGB5Q9Y5G0 923 aa12.84□□□□□ -0.35
PDLIM7-210ENST00000503827 EFCAB9A8MZ26 197 aa12.83□□□□□ -0.36
PDLIM7-210ENST00000503827 CD14P08571 375 aa12.83□□□□□ -0.36
PDLIM7-210ENST00000503827 IFNA8P32881 189 aa12.83□□□□□ -0.36
PDLIM7-210ENST00000503827 GRK5P34947 590 aa12.83□□□□□ -0.36
PDLIM7-210ENST00000503827 GGT2P36268 569 aa12.83□□□□□ -0.36
PDLIM7-210ENST00000503827 SLC9A3P48764 834 aa12.83□□□□□ -0.36
PDLIM7-210ENST00000503827 BMXP51813 675 aa12.83□□□□□ -0.36
PDLIM7-210ENST00000503827 CRYBA2P53672 197 aa12.83□□□□□ -0.36
PDLIM7-210ENST00000503827 ELF3P78545 371 aaPredicted RBP12.83□□□□□ -0.36
PDLIM7-210ENST00000503827 EGFEM1PQ0D2K5 195 aa12.83□□□□□ -0.36
PDLIM7-210ENST00000503827 FHL1Q13642 323 aa12.83□□□□□ -0.36
PDLIM7-210ENST00000503827 SELPLGQ14242 412 aa12.83□□□□□ -0.36
PDLIM7-210ENST00000503827 PCK2Q16822 640 aa12.83□□□□□ -0.36
PDLIM7-210ENST00000503827 CORO6Q6QEF8 472 aa12.83□□□□□ -0.36
PDLIM7-210ENST00000503827 CCDC80Q76M96 950 aa12.83□□□□□ -0.36
PDLIM7-210ENST00000503827 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.83□□□□□ -0.36
PDLIM7-210ENST00000503827 NAA40Q86UY6 237 aa12.83□□□□□ -0.36
PDLIM7-210ENST00000503827 WNT10AQ9GZT5 417 aa12.83□□□□□ -0.36
PDLIM7-210ENST00000503827 RNPEPL1Q9HAU8 725 aa12.83□□□□□ -0.36
PDLIM7-210ENST00000503827 MRPL15Q9P015 296 aaKnown RBP12.83□□□□□ -0.36
PDLIM7-210ENST00000503827 NDUFAF1Q9Y375 327 aa12.83□□□□□ -0.36
PDLIM7-210ENST00000503827 LHFPL6Q9Y693 200 aa12.83□□□□□ -0.36
PDLIM7-210ENST00000503827 MEGF11A6BM72 1044 aa12.82□□□□□ -0.36
PDLIM7-210ENST00000503827 GGT3PA6NGU5 568 aa12.82□□□□□ -0.36
PDLIM7-210ENST00000503827 PAICSP22234 425 aaKnown RBP12.82□□□□□ -0.36
PDLIM7-210ENST00000503827 HOXD3P31249 432 aaPredicted RBP12.82□□□□□ -0.36
PDLIM7-210ENST00000503827 CENPAP49450 140 aa12.82□□□□□ -0.36
PDLIM7-210ENST00000503827 GSK3BP49841 420 aa12.82□□□□□ -0.36
PDLIM7-210ENST00000503827 KRR1Q13601 381 aaKnown RBP12.82□□□□□ -0.36
PDLIM7-210ENST00000503827 KRTAP27-1Q3LI81 207 aa12.82□□□□□ -0.36
PDLIM7-210ENST00000503827 AGKQ53H12 422 aa12.82□□□□□ -0.36
PDLIM7-210ENST00000503827 ARSJQ5FYB0 599 aaPredicted RBP12.82□□□□□ -0.36
PDLIM7-210ENST00000503827 EPGNQ6UW88 154 aa12.82□□□□□ -0.36
PDLIM7-210ENST00000503827 FAM122BQ7Z309 247 aa12.82□□□□□ -0.36
PDLIM7-210ENST00000503827 DHDDSQ86SQ9 333 aa12.82□□□□□ -0.36
PDLIM7-210ENST00000503827 NRMQ8IXM6 262 aa12.82□□□□□ -0.36
PDLIM7-210ENST00000503827 OR13C2Q8NGS9 318 aa12.82□□□□□ -0.36
PDLIM7-210ENST00000503827 LRRC29Q8WV35 223 aa12.82□□□□□ -0.36
PDLIM7-210ENST00000503827 OR5M11Q96RB7 305 aa12.82□□□□□ -0.36
PDLIM7-210ENST00000503827 GPR61Q9BZJ8 451 aa12.82□□□□□ -0.36
PDLIM7-210ENST00000503827 NDEL1Q9GZM8 345 aa12.82□□□□□ -0.36
PDLIM7-210ENST00000503827 PRSS22Q9GZN4 317 aa12.82□□□□□ -0.36
PDLIM7-210ENST00000503827 KAT8Q9H7Z6 458 aaKnown RBP12.82□□□□□ -0.36
PDLIM7-210ENST00000503827 NMNAT1Q9HAN9 279 aaPredicted RBP12.82□□□□□ -0.36
PDLIM7-210ENST00000503827 CAPN7Q9Y6W3 813 aa12.82□□□□□ -0.36
PDLIM7-210ENST00000503827 A0A1W2PQ09 198 aa12.81□□□□□ -0.36
PDLIM7-210ENST00000503827 ACOT8O14734 319 aa12.81□□□□□ -0.36
PDLIM7-210ENST00000503827 ANGPTL7O43827 346 aa12.81□□□□□ -0.36
PDLIM7-210ENST00000503827 PAX6P26367 422 aa12.81□□□□□ -0.36
PDLIM7-210ENST00000503827 OR1E2P47887 323 aa12.81□□□□□ -0.36
PDLIM7-210ENST00000503827 TGM4P49221 684 aa12.81□□□□□ -0.36
PDLIM7-210ENST00000503827 WDR4P57081 412 aaKnown RBP12.81□□□□□ -0.36
PDLIM7-210ENST00000503827 PRKCDQ05655 676 aa12.81□□□□□ -0.36
PDLIM7-210ENST00000503827 MEP1BQ16820 701 aa12.81□□□□□ -0.36
PDLIM7-210ENST00000503827 VMACQ2NL98 169 aa12.81□□□□□ -0.36
PDLIM7-210ENST00000503827 RNF144BQ7Z419 303 aa12.81□□□□□ -0.36
PDLIM7-210ENST00000503827 FAM156AQ8NDB6 213 aa12.81□□□□□ -0.36
PDLIM7-210ENST00000503827 OR5D13Q8NGL4 314 aa12.81□□□□□ -0.36
PDLIM7-210ENST00000503827 OR9Q1Q8NGQ5 310 aa12.81□□□□□ -0.36
PDLIM7-210ENST00000503827 OR10A6Q8NH74 314 aa12.81□□□□□ -0.36
PDLIM7-210ENST00000503827 C12orf43Q96C57 262 aaKnown RBP12.81□□□□□ -0.36
PDLIM7-210ENST00000503827 AJUBAQ96IF1 538 aa12.81□□□□□ -0.36
PDLIM7-210ENST00000503827 CGREF1Q99674 301 aa12.81□□□□□ -0.36
PDLIM7-210ENST00000503827 PITX2Q99697 317 aa12.81□□□□□ -0.36
PDLIM7-210ENST00000503827 ATF6BQ99941 703 aa12.81□□□□□ -0.36
PDLIM7-210ENST00000503827 NUAK2Q9H093 628 aa12.81□□□□□ -0.36
PDLIM7-210ENST00000503827 H0YAE9 185 aa12.8□□□□□ -0.36
PDLIM7-210ENST00000503827 BHLHE40O14503 412 aa12.8□□□□□ -0.36
PDLIM7-210ENST00000503827 CLIC3O95833 236 aa12.8□□□□□ -0.36
PDLIM7-210ENST00000503827 TPTEP56180 551 aa12.8□□□□□ -0.36
PDLIM7-210ENST00000503827 CD83Q01151 205 aa12.8□□□□□ -0.36
PDLIM7-210ENST00000503827 TRAP1Q12931 704 aaKnown RBP12.8□□□□□ -0.36
PDLIM7-210ENST00000503827 CNN3Q15417 329 aaKnown RBP12.8□□□□□ -0.36
PDLIM7-210ENST00000503827 HCP5Q6MZN7 132 aa12.8□□□□□ -0.36
PDLIM7-210ENST00000503827 PIFOQ8TCI5 191 aa12.8□□□□□ -0.36
PDLIM7-210ENST00000503827 CDCA4Q9BXL8 241 aa12.8□□□□□ -0.36
PDLIM7-210ENST00000503827 VSX1Q9NZR4 365 aaPredicted RBP12.8□□□□□ -0.36
PDLIM7-210ENST00000503827 RYR2Q92736 4967 aa12.8□□□□□ -0.36
PDLIM7-210ENST00000503827 TRBV23-1A0A0A0MS06 115 aa12.79□□□□□ -0.36
PDLIM7-210ENST00000503827 IMPA2O14732 288 aa12.79□□□□□ -0.36
PDLIM7-210ENST00000503827 POU1F1P28069 291 aa12.79□□□□□ -0.36
PDLIM7-210ENST00000503827 SDHAP31040 664 aa12.79□□□□□ -0.36
PDLIM7-210ENST00000503827 MDH1P40925 334 aaKnown RBP12.79□□□□□ -0.36
PDLIM7-210ENST00000503827 NAA10P41227 235 aaPredicted RBP12.79□□□□□ -0.36
PDLIM7-210ENST00000503827 ZNF92Q03936 586 aa12.79□□□□□ -0.36
PDLIM7-210ENST00000503827 ZBED5Q49AG3 693 aa12.79□□□□□ -0.36
PDLIM7-210ENST00000503827 RABL3Q5HYI8 236 aa12.79□□□□□ -0.36
PDLIM7-210ENST00000503827 ATPAF1Q5TC12 328 aaPredicted RBP12.79□□□□□ -0.36
PDLIM7-210ENST00000503827 GPR139Q6DWJ6 353 aa12.79□□□□□ -0.36
PDLIM7-210ENST00000503827 DNM1P34Q6PK57 102 aa12.79□□□□□ -0.36
PDLIM7-210ENST00000503827 CFAP77Q6ZQR2 320 aa12.79□□□□□ -0.36
PDLIM7-210ENST00000503827 DPY19L4Q7Z388 723 aa12.79□□□□□ -0.36
PDLIM7-210ENST00000503827 TSEN54Q7Z6J9 526 aaKnown RBP12.79□□□□□ -0.36
PDLIM7-210ENST00000503827 C11orf53Q8IXP5 236 aa12.79□□□□□ -0.36
PDLIM7-210ENST00000503827 OR8S1Q8NH09 359 aa12.79□□□□□ -0.36
PDLIM7-210ENST00000503827 DUS3LQ96G46 650 aaKnown RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms