RNA–Protein interactions for RNA: ENST00000503274.1

NIPBL-203, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 789 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-203ENST00000503274 BTG2P78543 158 aa3.9□□□□□ -1.79
NIPBL-203ENST00000503274 MRPS11P82912 194 aaKnown RBP3.9□□□□□ -1.79
NIPBL-203ENST00000503274 IRF8Q02556 426 aa3.9□□□□□ -1.79
NIPBL-203ENST00000503274 CAV1Q03135 178 aa3.9□□□□□ -1.79
NIPBL-203ENST00000503274 TGFBIQ15582 683 aa3.9□□□□□ -1.79
NIPBL-203ENST00000503274 TSNQ15631 228 aaKnown RBP3.9□□□□□ -1.79
NIPBL-203ENST00000503274 PDK4Q16654 411 aa3.9□□□□□ -1.79
NIPBL-203ENST00000503274 KCTD19Q17RG1 926 aaPredicted RBP3.9□□□□□ -1.79
NIPBL-203ENST00000503274 OR8G2PQ6IF36 304 aa3.9□□□□□ -1.79
NIPBL-203ENST00000503274 OPN5Q6U736 354 aa3.9□□□□□ -1.79
NIPBL-203ENST00000503274 HSDL2Q6YN16 418 aa3.9□□□□□ -1.79
NIPBL-203ENST00000503274 C3orf62Q6ZUJ4 267 aa3.9□□□□□ -1.79
NIPBL-203ENST00000503274 DOLPP1Q86YN1 238 aa3.9□□□□□ -1.79
NIPBL-203ENST00000503274 CA13Q8N1Q1 262 aa3.9□□□□□ -1.79
NIPBL-203ENST00000503274 KIF2BQ8N4N8 673 aa3.9□□□□□ -1.79
NIPBL-203ENST00000503274 SNX31Q8N9S9 440 aa3.9□□□□□ -1.79
NIPBL-203ENST00000503274 MORN4Q8NDC4 146 aa3.9□□□□□ -1.79
NIPBL-203ENST00000503274 FBXO36Q8NEA4 188 aa3.9□□□□□ -1.79
NIPBL-203ENST00000503274 OR8K3Q8NH51 312 aa3.9□□□□□ -1.79
NIPBL-203ENST00000503274 STAG3L4Q8TBR4 150 aa3.9□□□□□ -1.79
NIPBL-203ENST00000503274 FAM57AQ8TBR7 257 aa3.9□□□□□ -1.79
NIPBL-203ENST00000503274 TRUB1Q8WWH5 349 aaKnown RBP3.9□□□□□ -1.79
NIPBL-203ENST00000503274 IL1F10Q8WWZ1 152 aa3.9□□□□□ -1.79
NIPBL-203ENST00000503274 HAVCR1Q96D42 359 aa3.9□□□□□ -1.79
NIPBL-203ENST00000503274 MS4A6EQ96DS6 147 aa3.9□□□□□ -1.79
NIPBL-203ENST00000503274 SMIM10Q96HG1 83 aa3.9□□□□□ -1.79
NIPBL-203ENST00000503274 VSTM2LQ96N03 204 aa3.9□□□□□ -1.79
NIPBL-203ENST00000503274 LINC00167Q96N53 147 aa3.9□□□□□ -1.79
NIPBL-203ENST00000503274 ZNF184Q99676 751 aaPredicted RBP3.9□□□□□ -1.79
NIPBL-203ENST00000503274 TBCDQ9BTW9 1192 aa3.9□□□□□ -1.79
NIPBL-203ENST00000503274 HES7Q9BYE0 225 aa3.9□□□□□ -1.79
NIPBL-203ENST00000503274 NMRAL1Q9HBL8 299 aa3.9□□□□□ -1.79
NIPBL-203ENST00000503274 LYRM4Q9HD34 91 aa3.9□□□□□ -1.79
NIPBL-203ENST00000503274 KCNJ16Q9NPI9 418 aa3.9□□□□□ -1.79
NIPBL-203ENST00000503274 MS4A12Q9NXJ0 267 aa3.9□□□□□ -1.79
NIPBL-203ENST00000503274 CD274Q9NZQ7 290 aa3.9□□□□□ -1.79
NIPBL-203ENST00000503274 RPS6KB2Q9UBS0 482 aa3.9□□□□□ -1.79
NIPBL-203ENST00000503274 FOXJ3Q9UPW0 622 aa3.9□□□□□ -1.79
NIPBL-203ENST00000503274 UTP11Q9Y3A2 253 aaKnown RBP3.9□□□□□ -1.79
NIPBL-203ENST00000503274 CSMD2Q7Z408 3487 aa3.9□□□□□ -1.79
NIPBL-203ENST00000503274 ABCA4P78363 2273 aa3.9□□□□□ -1.79
NIPBL-203ENST00000503274 AKAP6Q13023 2319 aa3.89□□□□□ -1.79
NIPBL-203ENST00000503274 NAV3Q8IVL0 2385 aa3.89□□□□□ -1.79
NIPBL-203ENST00000503274 IQANK1A0A1B0GTG1 560 aa3.89□□□□□ -1.79
NIPBL-203ENST00000503274 ANKRD30BLA7E2S9 258 aa3.89□□□□□ -1.79
NIPBL-203ENST00000503274 E7ESA3 106 aa3.89□□□□□ -1.79
NIPBL-203ENST00000503274 BCKDKO14874 412 aa3.89□□□□□ -1.79
NIPBL-203ENST00000503274 EMC8O43402 210 aa3.89□□□□□ -1.79
NIPBL-203ENST00000503274 STX11O75558 287 aa3.89□□□□□ -1.79
NIPBL-203ENST00000503274 SEMG1P04279 462 aa3.89□□□□□ -1.79
NIPBL-203ENST00000503274 P04436 131 aa3.89□□□□□ -1.79
NIPBL-203ENST00000503274 FUT1P19526 365 aa3.89□□□□□ -1.79
NIPBL-203ENST00000503274 CNR1P21554 472 aa3.89□□□□□ -1.79
NIPBL-203ENST00000503274 IVDP26440 423 aa3.89□□□□□ -1.79
NIPBL-203ENST00000503274 PEX19P40855 299 aa3.89□□□□□ -1.79
NIPBL-203ENST00000503274 RPL29P47914 159 aaKnown RBP3.89□□□□□ -1.79
NIPBL-203ENST00000503274 STARP49675 285 aa3.89□□□□□ -1.79
NIPBL-203ENST00000503274 RAP1GDS1P52306 607 aa3.89□□□□□ -1.79
NIPBL-203ENST00000503274 ARFIP1P53367 373 aa3.89□□□□□ -1.79
NIPBL-203ENST00000503274 LIM2P55344 173 aa3.89□□□□□ -1.79
NIPBL-203ENST00000503274 RAB10P61026 200 aa3.89□□□□□ -1.79
NIPBL-203ENST00000503274 GNB2P62879 340 aa3.89□□□□□ -1.79
NIPBL-203ENST00000503274 CHIT1Q13231 466 aa3.89□□□□□ -1.79
NIPBL-203ENST00000503274 NAB1Q13506 487 aa3.89□□□□□ -1.79
NIPBL-203ENST00000503274 DOC2AQ14183 400 aa3.89□□□□□ -1.79
NIPBL-203ENST00000503274 FAM83EQ2M2I3 478 aa3.89□□□□□ -1.79
NIPBL-203ENST00000503274 ADPRMQ3LIE5 342 aa3.89□□□□□ -1.79
NIPBL-203ENST00000503274 PVRIGQ6DKI7 326 aa3.89□□□□□ -1.79
NIPBL-203ENST00000503274 MED27Q6P2C8 311 aa3.89□□□□□ -1.79
NIPBL-203ENST00000503274 RTL4Q6ZR62 310 aa3.89□□□□□ -1.79
NIPBL-203ENST00000503274 HSD17B13Q7Z5P4 300 aaPredicted RBP3.89□□□□□ -1.79
NIPBL-203ENST00000503274 ERI1Q8IV48 349 aaKnown RBP3.89□□□□□ -1.79
NIPBL-203ENST00000503274 CTAGE3PQ8IX95 158 aa3.89□□□□□ -1.79
NIPBL-203ENST00000503274 ZFP62Q8NB50 900 aaPredicted RBP3.89□□□□□ -1.79
NIPBL-203ENST00000503274 APCDD1LQ8NCL9 501 aa3.89□□□□□ -1.79
NIPBL-203ENST00000503274 OR2T33Q8NG76 320 aa3.89□□□□□ -1.79
NIPBL-203ENST00000503274 OR2M7Q8NG81 312 aa3.89□□□□□ -1.79
NIPBL-203ENST00000503274 LILRB4Q8NHJ6 448 aa3.89□□□□□ -1.79
NIPBL-203ENST00000503274 SLC22A8Q8TCC7 542 aa3.89□□□□□ -1.79
NIPBL-203ENST00000503274 ANKRD49Q8WVL7 239 aa3.89□□□□□ -1.79
NIPBL-203ENST00000503274 MARC2Q969Z3 335 aa3.89□□□□□ -1.79
NIPBL-203ENST00000503274 FGGYQ96C11 551 aa3.89□□□□□ -1.79
NIPBL-203ENST00000503274 CMTM7Q96FZ5 175 aa3.89□□□□□ -1.79
NIPBL-203ENST00000503274 IL4I1Q96RQ9 567 aa3.89□□□□□ -1.79
NIPBL-203ENST00000503274 NPAS2Q99743 824 aa3.89□□□□□ -1.79
NIPBL-203ENST00000503274 PELOQ9BRX2 385 aaKnown RBP3.89□□□□□ -1.79
NIPBL-203ENST00000503274 ERP44Q9BS26 406 aa3.89□□□□□ -1.79
NIPBL-203ENST00000503274 OR8D2Q9GZM6 311 aa3.89□□□□□ -1.79
NIPBL-203ENST00000503274 SPNS1Q9H2V7 528 aa3.89□□□□□ -1.79
NIPBL-203ENST00000503274 EXO5Q9H790 373 aa3.89□□□□□ -1.79
NIPBL-203ENST00000503274 PTGES2Q9H7Z7 377 aa3.89□□□□□ -1.79
NIPBL-203ENST00000503274 ACTR8Q9H981 624 aa3.89□□□□□ -1.79
NIPBL-203ENST00000503274 CAB39LQ9H9S4 337 aa3.89□□□□□ -1.79
NIPBL-203ENST00000503274 MCCC2Q9HCC0 563 aa3.89□□□□□ -1.79
NIPBL-203ENST00000503274 OR1A1Q9P1Q5 309 aa3.89□□□□□ -1.79
NIPBL-203ENST00000503274 OPTCQ9UBM4 332 aa3.89□□□□□ -1.79
NIPBL-203ENST00000503274 PHF11Q9UIL8 331 aa3.89□□□□□ -1.79
NIPBL-203ENST00000503274 SNX24Q9Y343 169 aa3.89□□□□□ -1.79
NIPBL-203ENST00000503274 AP4B1Q9Y6B7 739 aa3.89□□□□□ -1.79
NIPBL-203ENST00000503274 NCOA6Q14686 2063 aaPredicted RBP3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms