RNA–Protein interactions for RNA: ENST00000494973.1

APTX-231, Transcript of aprataxin, human

TSL 4

Gene APTX, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-231	ENST00000494973	RAF1	P04049	648 aa		11.68	□□□□□ -0.54
APTX-231	ENST00000494973	OCM2	P0CE71	109 aa		11.68	□□□□□ -0.54
APTX-231	ENST00000494973	FAM157B	P0CG42	384 aa		11.68	□□□□□ -0.54
APTX-231	ENST00000494973	CALCR	P30988	508 aa		11.68	□□□□□ -0.54
APTX-231	ENST00000494973	LIPA	P38571	399 aa		11.68	□□□□□ -0.54
APTX-231	ENST00000494973	NKX6-1	P78426	367 aa	Predicted RBP	11.68	□□□□□ -0.54
APTX-231	ENST00000494973	SSX1	Q16384	188 aa		11.68	□□□□□ -0.54
APTX-231	ENST00000494973	GFOD2	Q3B7J2	385 aa		11.68	□□□□□ -0.54
APTX-231	ENST00000494973	ZMAT1	Q5H9K5	638 aa		11.68	□□□□□ -0.54
APTX-231	ENST00000494973	GLYATL3	Q5SZD4	288 aa		11.68	□□□□□ -0.54
APTX-231	ENST00000494973	MBNL2	Q5VZF2	373 aa	Known RBP	11.68	□□□□□ -0.54
APTX-231	ENST00000494973		Q6ZSR3	168 aa		11.68	□□□□□ -0.54
APTX-231	ENST00000494973	C22orf34	Q6ZV56	151 aa		11.68	□□□□□ -0.54
APTX-231	ENST00000494973	ZNF101	Q8IZC7	436 aa		11.68	□□□□□ -0.54
APTX-231	ENST00000494973	PLPP7	Q8NBV4	271 aa		11.68	□□□□□ -0.54
APTX-231	ENST00000494973	SEMA6D	Q8NFY4	1073 aa		11.68	□□□□□ -0.54
APTX-231	ENST00000494973	OR13C3	Q8NGS6	347 aa		11.68	□□□□□ -0.54
APTX-231	ENST00000494973	OR51E1	Q8TCB6	317 aa		11.68	□□□□□ -0.54
APTX-231	ENST00000494973	PDCD1LG2	Q9BQ51	273 aa		11.68	□□□□□ -0.54
APTX-231	ENST00000494973	TMED9	Q9BVK6	235 aa		11.68	□□□□□ -0.54
APTX-231	ENST00000494973	REPIN1	Q9BWE0	567 aa	Known RBP	11.68	□□□□□ -0.54
APTX-231	ENST00000494973	PTTG3P	Q9NZH4	202 aa		11.68	□□□□□ -0.54
APTX-231	ENST00000494973	CKLF	Q9UBR5	152 aa		11.68	□□□□□ -0.54
APTX-231	ENST00000494973	ATP23	Q9Y6H3	246 aa		11.68	□□□□□ -0.54
APTX-231	ENST00000494973	USP9X	Q93008	2570 aa	Predicted RBP	11.67	□□□□□ -0.54
APTX-231	ENST00000494973	TRBV5-5	A0A0J9YX44	114 aa		11.67	□□□□□ -0.54
APTX-231	ENST00000494973	TRDV1	A0A1B0GX56	115 aa		11.67	□□□□□ -0.54
APTX-231	ENST00000494973	GGT3P	A6NGU5	568 aa		11.67	□□□□□ -0.54
APTX-231	ENST00000494973	P2RY10	O00398	339 aa		11.67	□□□□□ -0.54
APTX-231	ENST00000494973	COX6B1	P14854	86 aa		11.67	□□□□□ -0.54
APTX-231	ENST00000494973	ZNF20	P17024	532 aa		11.67	□□□□□ -0.54
APTX-231	ENST00000494973	RANBP1	P43487	201 aa		11.67	□□□□□ -0.54
APTX-231	ENST00000494973	SRSF1	Q07955	248 aa	Known RBP eCLIP	11.67	□□□□□ -0.54
APTX-231	ENST00000494973	RIPPLY1	Q0D2K3	151 aa		11.67	□□□□□ -0.54
APTX-231	ENST00000494973	GK2	Q14410	553 aa	Predicted RBP	11.67	□□□□□ -0.54
APTX-231	ENST00000494973	OR8B8	Q15620	311 aa		11.67	□□□□□ -0.54
APTX-231	ENST00000494973	CD200R1L	Q6Q8B3	271 aa		11.67	□□□□□ -0.54
APTX-231	ENST00000494973	NAA40	Q86UY6	237 aa		11.67	□□□□□ -0.54
APTX-231	ENST00000494973	SLC25A40	Q8TBP6	338 aa		11.67	□□□□□ -0.54
APTX-231	ENST00000494973	PP6455	Q8WZ26	134 aa		11.67	□□□□□ -0.54
APTX-231	ENST00000494973	SGK3	Q96BR1	496 aa		11.67	□□□□□ -0.54
APTX-231	ENST00000494973	YIPF6	Q96EC8	236 aa		11.67	□□□□□ -0.54
APTX-231	ENST00000494973	PIK3IP1	Q96FE7	263 aa		11.67	□□□□□ -0.54
APTX-231	ENST00000494973	TMEM204	Q9BSN7	226 aa		11.67	□□□□□ -0.54
APTX-231	ENST00000494973	SLC22A4	Q9H015	551 aa		11.67	□□□□□ -0.54
APTX-231	ENST00000494973	SLITRK2	Q9H156	845 aa		11.67	□□□□□ -0.54
APTX-231	ENST00000494973	ENPP5	Q9UJA9	477 aa		11.67	□□□□□ -0.54
APTX-231	ENST00000494973	STARD10	Q9Y365	291 aa		11.67	□□□□□ -0.54
APTX-231	ENST00000494973	CMAHP	Q9Y471	501 aa		11.67	□□□□□ -0.54
APTX-231	ENST00000494973	SIRT4	Q9Y6E7	314 aa	Predicted RBP	11.67	□□□□□ -0.54
APTX-231	ENST00000494973		V9GYS6	101 aa		11.67	□□□□□ -0.54
APTX-231	ENST00000494973	DEFB108A	A8MXU0	73 aa		11.66	□□□□□ -0.54
APTX-231	ENST00000494973	C19orf84	I3L1E1	186 aa		11.66	□□□□□ -0.54
APTX-231	ENST00000494973	AIRE	O43918	545 aa		11.66	□□□□□ -0.54
APTX-231	ENST00000494973	NGF	P01138	241 aa		11.66	□□□□□ -0.54
APTX-231	ENST00000494973	FGF9	P31371	208 aa	Predicted RBP	11.66	□□□□□ -0.54
APTX-231	ENST00000494973	THBS4	P35443	961 aa		11.66	□□□□□ -0.54
APTX-231	ENST00000494973	TGFBR2	P37173	567 aa		11.66	□□□□□ -0.54
APTX-231	ENST00000494973	KLF3	P57682	345 aa	Predicted RBP	11.66	□□□□□ -0.54
APTX-231	ENST00000494973	ZNF92	Q03936	586 aa		11.66	□□□□□ -0.54
APTX-231	ENST00000494973	ODF4	Q2M2E3	257 aa		11.66	□□□□□ -0.54
APTX-231	ENST00000494973	ADAM5	Q6NVV9	412 aa		11.66	□□□□□ -0.54
APTX-231	ENST00000494973	ANKRD13B	Q86YJ7	626 aa		11.66	□□□□□ -0.54
APTX-231	ENST00000494973	OR2AE1	Q8NHA4	323 aa		11.66	□□□□□ -0.54
APTX-231	ENST00000494973	ZNF420	Q8TAQ5	688 aa	Predicted RBP	11.66	□□□□□ -0.54
APTX-231	ENST00000494973	SYNPR	Q8TBG9	265 aa		11.66	□□□□□ -0.54
APTX-231	ENST00000494973	KLF14	Q8TD94	323 aa	Predicted RBP	11.66	□□□□□ -0.54
APTX-231	ENST00000494973	RAB2B	Q8WUD1	216 aa		11.66	□□□□□ -0.54
APTX-231	ENST00000494973	HAVCR1	Q96D42	359 aa		11.66	□□□□□ -0.54
APTX-231	ENST00000494973	CPNE2	Q96FN4	548 aa	Predicted RBP	11.66	□□□□□ -0.54
APTX-231	ENST00000494973	MARS2	Q96GW9	593 aa	Known RBP	11.66	□□□□□ -0.54
APTX-231	ENST00000494973	FAM71F1	Q96KD3	344 aa	Predicted RBP	11.66	□□□□□ -0.54
APTX-231	ENST00000494973	OR2J1	Q9GZK6	312 aa		11.66	□□□□□ -0.54
APTX-231	ENST00000494973	OR51B6	Q9H340	312 aa		11.66	□□□□□ -0.54
APTX-231	ENST00000494973	EXOSC4	Q9NPD3	245 aa	Known RBP	11.66	□□□□□ -0.54
APTX-231	ENST00000494973	CYSLTR2	Q9NS75	346 aa		11.66	□□□□□ -0.54
APTX-231	ENST00000494973	CA10	Q9NS85	328 aa		11.66	□□□□□ -0.54
APTX-231	ENST00000494973	ZNF275	Q9NSD4	429 aa	Predicted RBP	11.66	□□□□□ -0.54
APTX-231	ENST00000494973	FAIM	Q9NVQ4	179 aa		11.66	□□□□□ -0.54
APTX-231	ENST00000494973	SF3B6	Q9Y3B4	125 aa	Known RBP	11.66	□□□□□ -0.54
APTX-231	ENST00000494973	LRRK2	Q5S007	2527 aa		11.66	□□□□□ -0.54
APTX-231	ENST00000494973	ZNF816-ZNF321P	A0A0X1KG74	233 aa		11.65	□□□□□ -0.54
APTX-231	ENST00000494973		A0A1B0GTI1	187 aa		11.65	□□□□□ -0.54
APTX-231	ENST00000494973		A6NNC1	897 aa		11.65	□□□□□ -0.54
APTX-231	ENST00000494973	ANKRD30BL	A7E2S9	258 aa		11.65	□□□□□ -0.54
APTX-231	ENST00000494973	ZNF701	M0R085	212 aa	Predicted RBP	11.65	□□□□□ -0.54
APTX-231	ENST00000494973	ERCC1	P07992	297 aa	Predicted RBP	11.65	□□□□□ -0.54
APTX-231	ENST00000494973	RNF224	P0DH78	156 aa		11.65	□□□□□ -0.54
APTX-231	ENST00000494973	ZNF250	P15622	560 aa		11.65	□□□□□ -0.54
APTX-231	ENST00000494973	FST	P19883	344 aa		11.65	□□□□□ -0.54
APTX-231	ENST00000494973	KITLG	P21583	273 aa		11.65	□□□□□ -0.54
APTX-231	ENST00000494973	MYL9	P24844	172 aa		11.65	□□□□□ -0.54
APTX-231	ENST00000494973	GNAL	P38405	381 aa		11.65	□□□□□ -0.54
APTX-231	ENST00000494973	EVX1	P49640	407 aa		11.65	□□□□□ -0.54
APTX-231	ENST00000494973	GSK3A	P49840	483 aa		11.65	□□□□□ -0.54
APTX-231	ENST00000494973	TMBIM6	P55061	237 aa		11.65	□□□□□ -0.54
APTX-231	ENST00000494973	RPS25	P62851	125 aa	Known RBP	11.65	□□□□□ -0.54
APTX-231	ENST00000494973	PPP3R1	P63098	170 aa		11.65	□□□□□ -0.54
APTX-231	ENST00000494973	FAM3A	P98173	230 aa		11.65	□□□□□ -0.54
APTX-231	ENST00000494973	MZT1	Q08AG7	82 aa		11.65	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms