RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 C1orf123Q9NWV4 160 aa19.27■□□□□ 0.68
COL27A1-208ENST00000494780 POMT1Q9Y6A1 747 aa19.27■□□□□ 0.68
COL27A1-208ENST00000494780 CENPVL3A0A0U1RRI6 287 aa19.26■□□□□ 0.67
COL27A1-208ENST00000494780 ARPC2O15144 300 aa19.26■□□□□ 0.67
COL27A1-208ENST00000494780 KRT36O76013 467 aa19.26■□□□□ 0.67
COL27A1-208ENST00000494780 KNG1P01042 644 aa19.26■□□□□ 0.67
COL27A1-208ENST00000494780 MELTFP08582 738 aa19.26■□□□□ 0.67
COL27A1-208ENST00000494780 RAG2P55895 527 aa19.26■□□□□ 0.67
COL27A1-208ENST00000494780 C11orf91Q3C1V1 193 aa19.26■□□□□ 0.67
COL27A1-208ENST00000494780 DCXRQ7Z4W1 244 aa19.26■□□□□ 0.67
COL27A1-208ENST00000494780 ZDHHC21Q8IVQ6 265 aa19.26■□□□□ 0.67
COL27A1-208ENST00000494780 GATAD2BQ8WXI9 593 aa19.26■□□□□ 0.67
COL27A1-208ENST00000494780 COPS4Q9BT78 406 aa19.26■□□□□ 0.67
COL27A1-208ENST00000494780 CHIAQ9BZP6 476 aa19.26■□□□□ 0.67
COL27A1-208ENST00000494780 TNFRSF19Q9NS68 423 aa19.26■□□□□ 0.67
COL27A1-208ENST00000494780 CD300AQ9UGN4 299 aa19.26■□□□□ 0.67
COL27A1-208ENST00000494780 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP19.25■□□□□ 0.67
COL27A1-208ENST00000494780 C5orf63A6NC05 138 aa19.25■□□□□ 0.67
COL27A1-208ENST00000494780 NDUFA7O95182 113 aa19.25■□□□□ 0.67
COL27A1-208ENST00000494780 ANOS1P23352 680 aa19.25■□□□□ 0.67
COL27A1-208ENST00000494780 HMGA2P52926 109 aa19.25■□□□□ 0.67
COL27A1-208ENST00000494780 PDCD1Q15116 288 aa19.25■□□□□ 0.67
COL27A1-208ENST00000494780 METTL11BQ5VVY1 283 aa19.25■□□□□ 0.67
COL27A1-208ENST00000494780 C17orf107Q6ZR85 190 aa19.25■□□□□ 0.67
COL27A1-208ENST00000494780 PGAM4Q8N0Y7 254 aa19.25■□□□□ 0.67
COL27A1-208ENST00000494780 LINC00471Q8N535 108 aa19.25■□□□□ 0.67
COL27A1-208ENST00000494780 KIR3DL3Q8N743 410 aa19.25■□□□□ 0.67
COL27A1-208ENST00000494780 ZNRF4Q8WWF5 429 aa19.25■□□□□ 0.67
COL27A1-208ENST00000494780 WFDC12Q8WWY7 111 aa19.25■□□□□ 0.67
COL27A1-208ENST00000494780 SMURF1Q9HCE7 757 aa19.25■□□□□ 0.67
COL27A1-208ENST00000494780 C14orf119Q9NWQ9 140 aa19.25■□□□□ 0.67
COL27A1-208ENST00000494780 IL20Q9NYY1 176 aa19.25■□□□□ 0.67
COL27A1-208ENST00000494780 C1RLQ9NZP8 487 aa19.25■□□□□ 0.67
COL27A1-208ENST00000494780 COMMD3-BMI1R4GMX3 469 aa19.25■□□□□ 0.67
COL27A1-208ENST00000494780 GRPP07492 148 aa19.24■□□□□ 0.67
COL27A1-208ENST00000494780 PSKH1P11801 424 aa19.24■□□□□ 0.67
COL27A1-208ENST00000494780 MSX2P35548 267 aaPredicted RBP19.24■□□□□ 0.67
COL27A1-208ENST00000494780 PRKXP51817 358 aa19.24■□□□□ 0.67
COL27A1-208ENST00000494780 RPL15P61313 204 aaKnown RBP19.24■□□□□ 0.67
COL27A1-208ENST00000494780 DEFA6Q01524 100 aa19.24■□□□□ 0.67
COL27A1-208ENST00000494780 OCLNQ16625 522 aa19.24■□□□□ 0.67
COL27A1-208ENST00000494780 PCK2Q16822 640 aa19.24■□□□□ 0.67
COL27A1-208ENST00000494780 OLFML2AQ68BL7 652 aa19.24■□□□□ 0.67
COL27A1-208ENST00000494780 LYPD4Q6UWN0 246 aa19.24■□□□□ 0.67
COL27A1-208ENST00000494780 GCSAMQ8N6F7 178 aa19.24■□□□□ 0.67
COL27A1-208ENST00000494780 OR56B2PQ8NGI1 322 aa19.24■□□□□ 0.67
COL27A1-208ENST00000494780 OR51L1Q8NGJ5 315 aa19.24■□□□□ 0.67
COL27A1-208ENST00000494780 SSMEM1Q8WWF3 244 aa19.24■□□□□ 0.67
COL27A1-208ENST00000494780 SLAMF6Q96DU3 332 aa19.24■□□□□ 0.67
COL27A1-208ENST00000494780 CDRT15Q96T59 188 aa19.24■□□□□ 0.67
COL27A1-208ENST00000494780 KCNJ15Q99712 375 aa19.24■□□□□ 0.67
COL27A1-208ENST00000494780 TRIM15Q9C019 465 aa19.24■□□□□ 0.67
COL27A1-208ENST00000494780 SIRPDQ9H106 197 aa19.24■□□□□ 0.67
COL27A1-208ENST00000494780 ACOXLQ9NUZ1 547 aa19.24■□□□□ 0.67
COL27A1-208ENST00000494780 A6NLC8 198 aa19.23■□□□□ 0.67
COL27A1-208ENST00000494780 XRCC2O43543 280 aa19.23■□□□□ 0.67
COL27A1-208ENST00000494780 ECDO95905 644 aaPredicted RBP19.23■□□□□ 0.67
COL27A1-208ENST00000494780 LHBP01229 141 aa19.23■□□□□ 0.67
COL27A1-208ENST00000494780 GYPAP02724 150 aa19.23■□□□□ 0.67
COL27A1-208ENST00000494780 FMO3P31513 532 aa19.23■□□□□ 0.67
COL27A1-208ENST00000494780 DDOSTP39656 456 aa19.23■□□□□ 0.67
COL27A1-208ENST00000494780 ENTPD1P49961 510 aa19.23■□□□□ 0.67
COL27A1-208ENST00000494780 RELBQ01201 579 aa19.23■□□□□ 0.67
COL27A1-208ENST00000494780 TAF13Q15543 124 aa19.23■□□□□ 0.67
COL27A1-208ENST00000494780 PDLIM3Q53GG5 364 aaPredicted RBP19.23■□□□□ 0.67
COL27A1-208ENST00000494780 ZNF826PQ6ZT77 177 aa19.23■□□□□ 0.67
COL27A1-208ENST00000494780 RASSF6Q6ZTQ3 369 aa19.23■□□□□ 0.67
COL27A1-208ENST00000494780 FAM90A1Q86YD7 464 aa19.23■□□□□ 0.67
COL27A1-208ENST00000494780 SLC37A3Q8NCC5 494 aa19.23■□□□□ 0.67
COL27A1-208ENST00000494780 TBC1D15Q8TC07 691 aa19.23■□□□□ 0.67
COL27A1-208ENST00000494780 BTBD10Q9BSF8 475 aa19.23■□□□□ 0.67
COL27A1-208ENST00000494780 RASSF4Q9H2L5 321 aa19.23■□□□□ 0.67
COL27A1-208ENST00000494780 CENPMQ9NSP4 180 aa19.23■□□□□ 0.67
COL27A1-208ENST00000494780 KAAG1Q9UBP8 84 aa19.23■□□□□ 0.67
COL27A1-208ENST00000494780 LYVE1Q9Y5Y7 322 aa19.23■□□□□ 0.67
COL27A1-208ENST00000494780 IGHV1-69DA0A0B4J2H0 117 aa19.22■□□□□ 0.67
COL27A1-208ENST00000494780 hCG_1807616A0A1W2PRN6 198 aa19.22■□□□□ 0.67
COL27A1-208ENST00000494780 IGHV1-69P01742 117 aa19.22■□□□□ 0.67
COL27A1-208ENST00000494780 SPARCP09486 303 aa19.22■□□□□ 0.67
COL27A1-208ENST00000494780 TEX30Q5JUR7 227 aa19.22■□□□□ 0.67
COL27A1-208ENST00000494780 TEX36Q5VZQ5 186 aa19.22■□□□□ 0.67
COL27A1-208ENST00000494780 LNX2Q8N448 690 aa19.22■□□□□ 0.67
COL27A1-208ENST00000494780 OR9Q2Q8NGE9 314 aa19.22■□□□□ 0.67
COL27A1-208ENST00000494780 OR9Q1Q8NGQ5 310 aa19.22■□□□□ 0.67
COL27A1-208ENST00000494780 SPSB4Q96A44 273 aa19.22■□□□□ 0.67
COL27A1-208ENST00000494780 CLPSL1A2RUU4 121 aa19.21■□□□□ 0.67
COL27A1-208ENST00000494780 ANKRD30BLA7E2S9 258 aa19.21■□□□□ 0.67
COL27A1-208ENST00000494780 ZNF878C9JN71 531 aa19.21■□□□□ 0.67
COL27A1-208ENST00000494780 TNFRSF11BO00300 401 aa19.21■□□□□ 0.67
COL27A1-208ENST00000494780 ZNF593O00488 134 aaPredicted RBP19.21■□□□□ 0.67
COL27A1-208ENST00000494780 DVL1O14640 695 aa19.21■□□□□ 0.67
COL27A1-208ENST00000494780 SNX3O60493 162 aa19.21■□□□□ 0.67
COL27A1-208ENST00000494780 SLC2A1P11166 492 aa19.21■□□□□ 0.67
COL27A1-208ENST00000494780 GRK5P34947 590 aa19.21■□□□□ 0.67
COL27A1-208ENST00000494780 SRSF4Q08170 494 aaKnown RBP19.21■□□□□ 0.67
COL27A1-208ENST00000494780 SPATS1Q496A3 300 aa19.21■□□□□ 0.67
COL27A1-208ENST00000494780 ZNF770Q6IQ21 691 aaPredicted RBP19.21■□□□□ 0.67
COL27A1-208ENST00000494780 BTN2A1Q7KYR7 527 aa19.21■□□□□ 0.67
COL27A1-208ENST00000494780 ZNF511Q8NB15 262 aa19.21■□□□□ 0.67
COL27A1-208ENST00000494780 OR8D4Q8NGM9 314 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms