RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 CACNG3O60359 315 aa2.69□□□□□ -1.98
SMC4-224ENST00000494612 ZNF324O75467 553 aaPredicted RBP2.69□□□□□ -1.98
SMC4-224ENST00000494612 CTDNEP1O95476 244 aa2.69□□□□□ -1.98
SMC4-224ENST00000494612 KRT14P02533 472 aa2.69□□□□□ -1.98
SMC4-224ENST00000494612 BCHEP06276 602 aa2.69□□□□□ -1.98
SMC4-224ENST00000494612 OR5H8P0DN80 308 aa2.69□□□□□ -1.98
SMC4-224ENST00000494612 GGT1P19440 569 aa2.69□□□□□ -1.98
SMC4-224ENST00000494612 ADORA1P30542 326 aa2.69□□□□□ -1.98
SMC4-224ENST00000494612 RRM2P31350 389 aa2.69□□□□□ -1.98
SMC4-224ENST00000494612 CSNK1EP49674 416 aaKnown RBP2.69□□□□□ -1.98
SMC4-224ENST00000494612 ZNF138P52744 262 aa2.69□□□□□ -1.98
SMC4-224ENST00000494612 CRISP1P54107 249 aa2.69□□□□□ -1.98
SMC4-224ENST00000494612 CCL23P55773 120 aa2.69□□□□□ -1.98
SMC4-224ENST00000494612 C21orf59P57076 290 aa2.69□□□□□ -1.98
SMC4-224ENST00000494612 ADARB1P78563 741 aaKnown RBP2.69□□□□□ -1.98
SMC4-224ENST00000494612 XKR4Q5GH76 650 aa2.69□□□□□ -1.98
SMC4-224ENST00000494612 SPANXN2Q5MJ10 180 aa2.69□□□□□ -1.98
SMC4-224ENST00000494612 KHDRBS2Q5VWX1 349 aaKnown RBP2.69□□□□□ -1.98
SMC4-224ENST00000494612 METTL21CQ5VZV1 264 aa2.69□□□□□ -1.98
SMC4-224ENST00000494612 C22orf42Q6IC83 251 aa2.69□□□□□ -1.98
SMC4-224ENST00000494612 ARL9Q6T311 187 aa2.69□□□□□ -1.98
SMC4-224ENST00000494612 ANGPTL8Q6UXH0 198 aa2.69□□□□□ -1.98
SMC4-224ENST00000494612 Q6ZR03 302 aa2.69□□□□□ -1.98
SMC4-224ENST00000494612 CENPQQ7L2Z9 268 aaPredicted RBP2.69□□□□□ -1.98
SMC4-224ENST00000494612 RIMKLAQ8IXN7 391 aa2.69□□□□□ -1.98
SMC4-224ENST00000494612 OFCC1Q8IZS5 231 aa2.69□□□□□ -1.98
SMC4-224ENST00000494612 OR10G4Q8NGN3 311 aa2.69□□□□□ -1.98
SMC4-224ENST00000494612 OR10J6PQ8NGY7 276 aa2.69□□□□□ -1.98
SMC4-224ENST00000494612 MCUR1Q96AQ8 359 aa2.69□□□□□ -1.98
SMC4-224ENST00000494612 EXOSC8Q96B26 276 aaKnown RBP2.69□□□□□ -1.98
SMC4-224ENST00000494612 TM4SF18Q96CE8 201 aa2.69□□□□□ -1.98
SMC4-224ENST00000494612 PDXPQ96GD0 296 aa2.69□□□□□ -1.98
SMC4-224ENST00000494612 PRRC1Q96M27 445 aa2.69□□□□□ -1.98
SMC4-224ENST00000494612 C11orf70Q9BRQ4 267 aa2.69□□□□□ -1.98
SMC4-224ENST00000494612 MTG1Q9BT17 334 aaPredicted RBP2.69□□□□□ -1.98
SMC4-224ENST00000494612 NDFIP1Q9BT67 221 aa2.69□□□□□ -1.98
SMC4-224ENST00000494612 CHAC1Q9BUX1 264 aa2.69□□□□□ -1.98
SMC4-224ENST00000494612 TMEM185BQ9H7F4 350 aa2.69□□□□□ -1.98
SMC4-224ENST00000494612 GCNT4Q9P109 453 aa2.69□□□□□ -1.98
SMC4-224ENST00000494612 PSME2Q9UL46 239 aa2.69□□□□□ -1.98
SMC4-224ENST00000494612 CHD9Q3L8U1 2897 aa2.69□□□□□ -1.98
SMC4-224ENST00000494612 USP34Q70CQ2 3546 aa2.69□□□□□ -1.98
SMC4-224ENST00000494612 CHD7Q9P2D1 2997 aa2.69□□□□□ -1.98
SMC4-224ENST00000494612 CDK5RAP2Q96SN8 1893 aa2.69□□□□□ -1.98
SMC4-224ENST00000494612 ELP1O95163 1332 aa2.68□□□□□ -1.98
SMC4-224ENST00000494612 SIPA1L1O43166 1804 aa2.68□□□□□ -1.98
SMC4-224ENST00000494612 IGHV3-74A0A0B4J1X5 117 aa2.68□□□□□ -1.98
SMC4-224ENST00000494612 RSPH10B2B2RC85 870 aa2.68□□□□□ -1.98
SMC4-224ENST00000494612 CDH16O75309 829 aa2.68□□□□□ -1.98
SMC4-224ENST00000494612 FOXH1O75593 365 aa2.68□□□□□ -1.98
SMC4-224ENST00000494612 FLOT1O75955 427 aa2.68□□□□□ -1.98
SMC4-224ENST00000494612 CIAO1O76071 339 aa2.68□□□□□ -1.98
SMC4-224ENST00000494612 HLA-DPB1P04440 258 aa2.68□□□□□ -1.98
SMC4-224ENST00000494612 RSPH10BP0C881 870 aa2.68□□□□□ -1.98
SMC4-224ENST00000494612 STAG3L3P0CL85 134 aa2.68□□□□□ -1.98
SMC4-224ENST00000494612 FOXN2P32314 431 aa2.68□□□□□ -1.98
SMC4-224ENST00000494612 GPX4P36969 197 aaPredicted RBP2.68□□□□□ -1.98
SMC4-224ENST00000494612 CCT6AP40227 531 aaKnown RBP2.68□□□□□ -1.98
SMC4-224ENST00000494612 SLC1A1P43005 524 aa2.68□□□□□ -1.98
SMC4-224ENST00000494612 MNAT1P51948 309 aa2.68□□□□□ -1.98
SMC4-224ENST00000494612 RGS8P57771 180 aaPredicted RBP2.68□□□□□ -1.98
SMC4-224ENST00000494612 STXBP1P61764 594 aaKnown RBP2.68□□□□□ -1.98
SMC4-224ENST00000494612 HADHQ16836 314 aaKnown RBP2.68□□□□□ -1.98
SMC4-224ENST00000494612 PRMT9Q6P2P2 845 aa2.68□□□□□ -1.98
SMC4-224ENST00000494612 CLEC2AQ6UVW9 174 aa2.68□□□□□ -1.98
SMC4-224ENST00000494612 EIF3MQ7L2H7 374 aaKnown RBP2.68□□□□□ -1.98
SMC4-224ENST00000494612 TMCO2Q7Z6W1 182 aaPredicted RBP2.68□□□□□ -1.98
SMC4-224ENST00000494612 DEFB128Q7Z7B8 93 aa2.68□□□□□ -1.98
SMC4-224ENST00000494612 PRSS58Q8IYP2 241 aa2.68□□□□□ -1.98
SMC4-224ENST00000494612 BPIFCQ8NFQ6 507 aa2.68□□□□□ -1.98
SMC4-224ENST00000494612 LKAAEAR1Q8TD35 194 aa2.68□□□□□ -1.98
SMC4-224ENST00000494612 ZNF75CPQ92670 426 aaPredicted RBP2.68□□□□□ -1.98
SMC4-224ENST00000494612 FOPNLQ96NB1 174 aa2.68□□□□□ -1.98
SMC4-224ENST00000494612 CHP1Q99653 195 aa2.68□□□□□ -1.98
SMC4-224ENST00000494612 UPF3BQ9BZI7 483 aaKnown RBP2.68□□□□□ -1.98
SMC4-224ENST00000494612 LINC00597Q9H2U6 94 aa2.68□□□□□ -1.98
SMC4-224ENST00000494612 UBE2ZQ9H832 354 aaPredicted RBP2.68□□□□□ -1.98
SMC4-224ENST00000494612 EDA2RQ9HAV5 297 aa2.68□□□□□ -1.98
SMC4-224ENST00000494612 C12orf10Q9HB07 376 aa2.68□□□□□ -1.98
SMC4-224ENST00000494612 ISYNA1Q9NPH2 558 aa2.68□□□□□ -1.98
SMC4-224ENST00000494612 CYTL1Q9NRR1 136 aa2.68□□□□□ -1.98
SMC4-224ENST00000494612 AGPAT4Q9NRZ5 378 aa2.68□□□□□ -1.98
SMC4-224ENST00000494612 GPATCH2LQ9NWQ4 482 aa2.68□□□□□ -1.98
SMC4-224ENST00000494612 ROBO3Q96MS0 1386 aa2.68□□□□□ -1.98
SMC4-224ENST00000494612 LRP4O75096 1905 aa2.68□□□□□ -1.98
SMC4-224ENST00000494612 FOCADQ5VW36 1801 aa2.68□□□□□ -1.98
SMC4-224ENST00000494612 ASTN1O14525 1302 aa2.68□□□□□ -1.98
SMC4-224ENST00000494612 TTC28Q96AY4 2481 aa2.67□□□□□ -1.98
SMC4-224ENST00000494612 GOLGA6L7A0A1B0GV03 622 aa2.67□□□□□ -1.98
SMC4-224ENST00000494612 ERICH4A6NGS2 130 aa2.67□□□□□ -1.98
SMC4-224ENST00000494612 SIRPB1O00241 398 aa2.67□□□□□ -1.98
SMC4-224ENST00000494612 CASC3O15234 703 aaKnown RBP2.67□□□□□ -1.98
SMC4-224ENST00000494612 FKBP6O75344 327 aa2.67□□□□□ -1.98
SMC4-224ENST00000494612 SLC25A14O95258 325 aaPredicted RBP2.67□□□□□ -1.98
SMC4-224ENST00000494612 RETP07949 1114 aa2.67□□□□□ -1.98
SMC4-224ENST00000494612 UBTFL6P0CB48 400 aaPredicted RBP2.67□□□□□ -1.98
SMC4-224ENST00000494612 MYL2P10916 166 aa2.67□□□□□ -1.98
SMC4-224ENST00000494612 RALBP11234 206 aa2.67□□□□□ -1.98
SMC4-224ENST00000494612 IL9P15248 144 aa2.67□□□□□ -1.98
SMC4-224ENST00000494612 RAB3BP20337 219 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms