RNA–Protein interactions for RNA: ENST00000494195.1

HMGB3P14-201, Transcript of high mobility group box 3 pseudogene 14, humanhuman

BASIC

Gene HMGB3P14, Length 599 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P14-201ENST00000494195 ROPN1BQ9BZX4 212 aaPredicted RBP3.78□□□□□ -1.8
HMGB3P14-201ENST00000494195 FAM107BQ9H098 131 aa3.78□□□□□ -1.8
HMGB3P14-201ENST00000494195 ISYNA1Q9NPH2 558 aa3.78□□□□□ -1.8
HMGB3P14-201ENST00000494195 GGA2Q9UJY4 613 aa3.78□□□□□ -1.8
HMGB3P14-201ENST00000494195 CLEC4AQ9UMR7 237 aa3.78□□□□□ -1.8
HMGB3P14-201ENST00000494195 SIP14410 1827 aa3.78□□□□□ -1.8
HMGB3P14-201ENST00000494195 hCG_1818297A0A087WSY0 165 aa3.77□□□□□ -1.81
HMGB3P14-201ENST00000494195 IGHV5-10-1A0A0J9YXX1 117 aa3.77□□□□□ -1.81
HMGB3P14-201ENST00000494195 HIDE1A8MVS5 230 aa3.77□□□□□ -1.81
HMGB3P14-201ENST00000494195 APOC4-APOC2K7ER74 178 aa3.77□□□□□ -1.81
HMGB3P14-201ENST00000494195 M0QYV0 167 aa3.77□□□□□ -1.81
HMGB3P14-201ENST00000494195 PIRO00625 290 aa3.77□□□□□ -1.81
HMGB3P14-201ENST00000494195 EIF3HO15372 352 aaKnown RBP eCLIP3.77□□□□□ -1.81
HMGB3P14-201ENST00000494195 SRP72O76094 671 aaKnown RBP3.77□□□□□ -1.81
HMGB3P14-201ENST00000494195 SLC25A14O95258 325 aaPredicted RBP3.77□□□□□ -1.81
HMGB3P14-201ENST00000494195 AGTP01019 485 aa3.77□□□□□ -1.81
HMGB3P14-201ENST00000494195 KRT14P02533 472 aa3.77□□□□□ -1.81
HMGB3P14-201ENST00000494195 APOC2P02655 101 aa3.77□□□□□ -1.81
HMGB3P14-201ENST00000494195 CYBAP13498 195 aa3.77□□□□□ -1.81
HMGB3P14-201ENST00000494195 WARSP23381 471 aaKnown RBP3.77□□□□□ -1.81
HMGB3P14-201ENST00000494195 CDKN2BP42772 138 aa3.77□□□□□ -1.81
HMGB3P14-201ENST00000494195 RFX3P48380 749 aa3.77□□□□□ -1.81
HMGB3P14-201ENST00000494195 AIF1P55008 147 aa3.77□□□□□ -1.81
HMGB3P14-201ENST00000494195 PLTPP55058 493 aa3.77□□□□□ -1.81
HMGB3P14-201ENST00000494195 ESRRGP62508 458 aa3.77□□□□□ -1.81
HMGB3P14-201ENST00000494195 SLC25A11Q02978 314 aaKnown RBP3.77□□□□□ -1.81
HMGB3P14-201ENST00000494195 IFFO1Q0D2I5 559 aa3.77□□□□□ -1.81
HMGB3P14-201ENST00000494195 SYCNQ0VAF6 134 aa3.77□□□□□ -1.81
HMGB3P14-201ENST00000494195 BST2Q10589 180 aaKnown RBP3.77□□□□□ -1.81
HMGB3P14-201ENST00000494195 PDK2Q15119 407 aa3.77□□□□□ -1.81
HMGB3P14-201ENST00000494195 UAP1Q16222 522 aaPredicted RBP3.77□□□□□ -1.81
HMGB3P14-201ENST00000494195 PTPN20Q4JDL3 420 aa3.77□□□□□ -1.81
HMGB3P14-201ENST00000494195 SHISA6Q6ZSJ9 500 aa3.77□□□□□ -1.81
HMGB3P14-201ENST00000494195 SLC25A48Q6ZT89 311 aaKnown RBP3.77□□□□□ -1.81
HMGB3P14-201ENST00000494195 PSTKQ8IV42 348 aaKnown RBP3.77□□□□□ -1.81
HMGB3P14-201ENST00000494195 TMEM86AQ8N2M4 240 aa3.77□□□□□ -1.81
HMGB3P14-201ENST00000494195 RIBC1Q8N443 379 aaPredicted RBP3.77□□□□□ -1.81
HMGB3P14-201ENST00000494195 ZNF461Q8TAF7 563 aa3.77□□□□□ -1.81
HMGB3P14-201ENST00000494195 RSPH1Q8WYR4 309 aa3.77□□□□□ -1.81
HMGB3P14-201ENST00000494195 CPB2Q96IY4 423 aa3.77□□□□□ -1.81
HMGB3P14-201ENST00000494195 P2RX4Q99571 388 aa3.77□□□□□ -1.81
HMGB3P14-201ENST00000494195 CCDC77Q9BR77 488 aa3.77□□□□□ -1.81
HMGB3P14-201ENST00000494195 MTG1Q9BT17 334 aaPredicted RBP3.77□□□□□ -1.81
HMGB3P14-201ENST00000494195 RPF2Q9H7B2 306 aaKnown RBP3.77□□□□□ -1.81
HMGB3P14-201ENST00000494195 TMBIM4Q9HC24 238 aa3.77□□□□□ -1.81
HMGB3P14-201ENST00000494195 PSG8Q9UQ74 426 aa3.77□□□□□ -1.81
HMGB3P14-201ENST00000494195 RFNGQ9Y644 331 aa3.77□□□□□ -1.81
HMGB3P14-201ENST00000494195 TMEM14AQ9Y6G1 99 aa3.77□□□□□ -1.81
HMGB3P14-201ENST00000494195 LCTP09848 1927 aa3.77□□□□□ -1.81
HMGB3P14-201ENST00000494195 SBF1O95248 1867 aa3.76□□□□□ -1.81
HMGB3P14-201ENST00000494195 F8VP50 259 aa3.76□□□□□ -1.81
HMGB3P14-201ENST00000494195 DNALI1O14645 258 aaPredicted RBP3.76□□□□□ -1.81
HMGB3P14-201ENST00000494195 SOX15O60248 233 aa3.76□□□□□ -1.81
HMGB3P14-201ENST00000494195 GABARAPO95166 117 aa3.76□□□□□ -1.81
HMGB3P14-201ENST00000494195 RCBTB2O95199 551 aa3.76□□□□□ -1.81
HMGB3P14-201ENST00000494195 TTC4O95801 387 aa3.76□□□□□ -1.81
HMGB3P14-201ENST00000494195 FABP3P05413 133 aa3.76□□□□□ -1.81
HMGB3P14-201ENST00000494195 ADRA2AP08913 450 aa3.76□□□□□ -1.81
HMGB3P14-201ENST00000494195 ZNF14P17017 642 aaPredicted RBP3.76□□□□□ -1.81
HMGB3P14-201ENST00000494195 KDELR1P24390 212 aa3.76□□□□□ -1.81
HMGB3P14-201ENST00000494195 IVDP26440 423 aa3.76□□□□□ -1.81
HMGB3P14-201ENST00000494195 HRH1P35367 487 aa3.76□□□□□ -1.81
HMGB3P14-201ENST00000494195 SEC61GP60059 68 aa3.76□□□□□ -1.81
HMGB3P14-201ENST00000494195 MRPS25P82663 173 aaKnown RBP3.76□□□□□ -1.81
HMGB3P14-201ENST00000494195 GPM6BQ13491 265 aa3.76□□□□□ -1.81
HMGB3P14-201ENST00000494195 ZSCAN26Q16670 478 aa3.76□□□□□ -1.81
HMGB3P14-201ENST00000494195 GOLGA7BQ2TAP0 167 aa3.76□□□□□ -1.81
HMGB3P14-201ENST00000494195 COX19Q49B96 90 aa3.76□□□□□ -1.81
HMGB3P14-201ENST00000494195 TTMPQ5BVD1 217 aa3.76□□□□□ -1.81
HMGB3P14-201ENST00000494195 TNFAIP8L3Q5GJ75 292 aa3.76□□□□□ -1.81
HMGB3P14-201ENST00000494195 CDR2LQ86X02 465 aaPredicted RBP3.76□□□□□ -1.81
HMGB3P14-201ENST00000494195 RIMKLAQ8IXN7 391 aa3.76□□□□□ -1.81
HMGB3P14-201ENST00000494195 DNAJB3Q8WWF6 145 aa3.76□□□□□ -1.81
HMGB3P14-201ENST00000494195 TLCD1Q96CP7 247 aa3.76□□□□□ -1.81
HMGB3P14-201ENST00000494195 HAUS1Q96CS2 278 aa3.76□□□□□ -1.81
HMGB3P14-201ENST00000494195 SERPINB12Q96P63 405 aa3.76□□□□□ -1.81
HMGB3P14-201ENST00000494195 NEUROG2Q9H2A3 272 aa3.76□□□□□ -1.81
HMGB3P14-201ENST00000494195 SGK2Q9HBY8 427 aa3.76□□□□□ -1.81
HMGB3P14-201ENST00000494195 HMG20AQ9NP66 347 aa3.76□□□□□ -1.81
HMGB3P14-201ENST00000494195 LGALS13Q9UHV8 139 aa3.76□□□□□ -1.81
HMGB3P14-201ENST00000494195 SNX24Q9Y343 169 aa3.76□□□□□ -1.81
HMGB3P14-201ENST00000494195 PTPRFP10586 1907 aa3.76□□□□□ -1.81
HMGB3P14-201ENST00000494195 COL11A1P12107 1806 aaPredicted RBP3.75□□□□□ -1.81
HMGB3P14-201ENST00000494195 A0A1W2PPV9 198 aa3.75□□□□□ -1.81
HMGB3P14-201ENST00000494195 C7orf66A4D0T2 115 aa3.75□□□□□ -1.81
HMGB3P14-201ENST00000494195 HUS1O60921 280 aa3.75□□□□□ -1.81
HMGB3P14-201ENST00000494195 CDH16O75309 829 aa3.75□□□□□ -1.81
HMGB3P14-201ENST00000494195 UTS2O95399 124 aa3.75□□□□□ -1.81
HMGB3P14-201ENST00000494195 FAM107AO95990 144 aa3.75□□□□□ -1.81
HMGB3P14-201ENST00000494195 ATP1B2P14415 290 aaPredicted RBP3.75□□□□□ -1.81
HMGB3P14-201ENST00000494195 MIPP30301 263 aa3.75□□□□□ -1.81
HMGB3P14-201ENST00000494195 SDC4P31431 198 aa3.75□□□□□ -1.81
HMGB3P14-201ENST00000494195 MAGEA6P43360 314 aa3.75□□□□□ -1.81
HMGB3P14-201ENST00000494195 SLC18A1P54219 525 aa3.75□□□□□ -1.81
HMGB3P14-201ENST00000494195 GNGT1P63211 74 aa3.75□□□□□ -1.81
HMGB3P14-201ENST00000494195 XRCC4Q13426 336 aa3.75□□□□□ -1.81
HMGB3P14-201ENST00000494195 CHRFAM7AQ494W8 412 aa3.75□□□□□ -1.81
HMGB3P14-201ENST00000494195 KRTAP13-2Q52LG2 175 aa3.75□□□□□ -1.81
HMGB3P14-201ENST00000494195 TWF2Q6IBS0 349 aaKnown RBP3.75□□□□□ -1.81
HMGB3P14-201ENST00000494195 BZW1Q7L1Q6 419 aaKnown RBP3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms