RNA–Protein interactions for RNA: ENST00000493682.6

COL9A1-210, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 1,117 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-210ENST00000493682 CCDC22O60826 627 aa14.36□□□□□ -0.11
COL9A1-210ENST00000493682 GADD45GO95257 159 aa14.36□□□□□ -0.11
COL9A1-210ENST00000493682 IGHV4-59P01825 116 aa14.36□□□□□ -0.11
COL9A1-210ENST00000493682 GRPP07492 148 aa14.36□□□□□ -0.11
COL9A1-210ENST00000493682 ZNF823P16415 610 aa14.36□□□□□ -0.11
COL9A1-210ENST00000493682 RPS27P42677 84 aaKnown RBP14.36□□□□□ -0.11
COL9A1-210ENST00000493682 SMIM11AP58511 58 aa14.36□□□□□ -0.11
COL9A1-210ENST00000493682 PSME3P61289 254 aa14.36□□□□□ -0.11
COL9A1-210ENST00000493682 ARF6P62330 175 aa14.36□□□□□ -0.11
COL9A1-210ENST00000493682 GLYATL3Q5SZD4 288 aa14.36□□□□□ -0.11
COL9A1-210ENST00000493682 SLC35F1Q5T1Q4 408 aa14.36□□□□□ -0.11
COL9A1-210ENST00000493682 ZNF826PQ6ZT77 177 aa14.36□□□□□ -0.11
COL9A1-210ENST00000493682 FAM90A1Q86YD7 464 aa14.36□□□□□ -0.11
COL9A1-210ENST00000493682 LINC01006Q8NI28 216 aa14.36□□□□□ -0.11
COL9A1-210ENST00000493682 NSRP1Q9H0G5 558 aaKnown RBP14.36□□□□□ -0.11
COL9A1-210ENST00000493682 MRPL15Q9P015 296 aaKnown RBP14.36□□□□□ -0.11
COL9A1-210ENST00000493682 V9GYQ6 96 aa14.36□□□□□ -0.11
COL9A1-210ENST00000493682 A0A0U1RQK1 487 aa14.35□□□□□ -0.11
COL9A1-210ENST00000493682 A6NLC8 198 aa14.35□□□□□ -0.11
COL9A1-210ENST00000493682 DVL1O14640 695 aa14.35□□□□□ -0.11
COL9A1-210ENST00000493682 OTX1P32242 354 aaPredicted RBP14.35□□□□□ -0.11
COL9A1-210ENST00000493682 PYCR1P32322 319 aa14.35□□□□□ -0.11
COL9A1-210ENST00000493682 IER3P46695 156 aa14.35□□□□□ -0.11
COL9A1-210ENST00000493682 SPIBQ01892 262 aa14.35□□□□□ -0.11
COL9A1-210ENST00000493682 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.35□□□□□ -0.11
COL9A1-210ENST00000493682 POU4F2Q12837 409 aa14.35□□□□□ -0.11
COL9A1-210ENST00000493682 ASPHD2Q6ICH7 369 aa14.35□□□□□ -0.11
COL9A1-210ENST00000493682 DRAM2Q6UX65 266 aa14.35□□□□□ -0.11
COL9A1-210ENST00000493682 BTN2A1Q7KYR7 527 aa14.35□□□□□ -0.11
COL9A1-210ENST00000493682 LDLRAD3Q86YD5 345 aa14.35□□□□□ -0.11
COL9A1-210ENST00000493682 GCSAMQ8N6F7 178 aa14.35□□□□□ -0.11
COL9A1-210ENST00000493682 SPERTQ8NA61 448 aa14.35□□□□□ -0.11
COL9A1-210ENST00000493682 RBM4BQ9BQ04 359 aaKnown RBP14.35□□□□□ -0.11
COL9A1-210ENST00000493682 CCDC134Q9H6E4 229 aa14.35□□□□□ -0.11
COL9A1-210ENST00000493682 NOTCH1P46531 2555 aa14.35□□□□□ -0.11
COL9A1-210ENST00000493682 hCG_1807616A0A1W2PRN6 198 aa14.34□□□□□ -0.11
COL9A1-210ENST00000493682 OR10H3O60404 316 aa14.34□□□□□ -0.11
COL9A1-210ENST00000493682 GMNNO75496 209 aa14.34□□□□□ -0.11
COL9A1-210ENST00000493682 CLPXO76031 633 aa14.34□□□□□ -0.11
COL9A1-210ENST00000493682 ECDO95905 644 aaPredicted RBP14.34□□□□□ -0.11
COL9A1-210ENST00000493682 LHBP01229 141 aa14.34□□□□□ -0.11
COL9A1-210ENST00000493682 SEMG1P04279 462 aa14.34□□□□□ -0.11
COL9A1-210ENST00000493682 PSKH1P11801 424 aa14.34□□□□□ -0.11
COL9A1-210ENST00000493682 GSSP48637 474 aa14.34□□□□□ -0.11
COL9A1-210ENST00000493682 PROK1P58294 105 aa14.34□□□□□ -0.11
COL9A1-210ENST00000493682 C11orf91Q3C1V1 193 aa14.34□□□□□ -0.11
COL9A1-210ENST00000493682 PDZD9Q8IXQ8 264 aa14.34□□□□□ -0.11
COL9A1-210ENST00000493682 SCCPDHQ8NBX0 429 aa14.34□□□□□ -0.11
COL9A1-210ENST00000493682 PYURFQ96I23 114 aa14.34□□□□□ -0.11
COL9A1-210ENST00000493682 GORASP2Q9H8Y8 452 aa14.34□□□□□ -0.11
COL9A1-210ENST00000493682 IGHV3OR15-7A0A075B7D8 119 aa14.33□□□□□ -0.12
COL9A1-210ENST00000493682 TVP23AA6NH52 213 aa14.33□□□□□ -0.12
COL9A1-210ENST00000493682 BHLHE40O14503 412 aa14.33□□□□□ -0.12
COL9A1-210ENST00000493682 IFNGR2P38484 337 aa14.33□□□□□ -0.12
COL9A1-210ENST00000493682 TAF9Q16594 264 aa14.33□□□□□ -0.12
COL9A1-210ENST00000493682 TEX36Q5VZQ5 186 aa14.33□□□□□ -0.12
COL9A1-210ENST00000493682 LYPD4Q6UWN0 246 aa14.33□□□□□ -0.12
COL9A1-210ENST00000493682 FGFRL1Q8N441 504 aa14.33□□□□□ -0.12
COL9A1-210ENST00000493682 LNX2Q8N448 690 aa14.33□□□□□ -0.12
COL9A1-210ENST00000493682 RNF148Q8N7C7 305 aa14.33□□□□□ -0.12
COL9A1-210ENST00000493682 CYB561A3Q8NBI2 242 aa14.33□□□□□ -0.12
COL9A1-210ENST00000493682 PROKR2Q8NFJ6 384 aa14.33□□□□□ -0.12
COL9A1-210ENST00000493682 OR56B2PQ8NGI1 322 aa14.33□□□□□ -0.12
COL9A1-210ENST00000493682 ZNRF4Q8WWF5 429 aa14.33□□□□□ -0.12
COL9A1-210ENST00000493682 ST8SIA4Q92187 359 aa14.33□□□□□ -0.12
COL9A1-210ENST00000493682 UBE2FQ969M7 185 aa14.33□□□□□ -0.12
COL9A1-210ENST00000493682 DDOQ99489 341 aa14.33□□□□□ -0.12
COL9A1-210ENST00000493682 CNTD2Q9H8S5 307 aa14.33□□□□□ -0.12
COL9A1-210ENST00000493682 SPAG4Q9NPE6 437 aa14.33□□□□□ -0.12
COL9A1-210ENST00000493682 C14orf119Q9NWQ9 140 aa14.33□□□□□ -0.12
COL9A1-210ENST00000493682 ADA2Q9NZK5 511 aa14.33□□□□□ -0.12
COL9A1-210ENST00000493682 KAAG1Q9UBP8 84 aa14.33□□□□□ -0.12
COL9A1-210ENST00000493682 RPUSD1Q9UJJ7 312 aaKnown RBP14.33□□□□□ -0.12
COL9A1-210ENST00000493682 WNK1Q9H4A3 2382 aa14.33□□□□□ -0.12
COL9A1-210ENST00000493682 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.32□□□□□ -0.12
COL9A1-210ENST00000493682 SLC2A1P11166 492 aa14.32□□□□□ -0.12
COL9A1-210ENST00000493682 PRKXP51817 358 aa14.32□□□□□ -0.12
COL9A1-210ENST00000493682 MZT1Q08AG7 82 aa14.32□□□□□ -0.12
COL9A1-210ENST00000493682 TSPAN31Q12999 210 aa14.32□□□□□ -0.12
COL9A1-210ENST00000493682 CDONQ4KMG0 1287 aa14.32□□□□□ -0.12
COL9A1-210ENST00000493682 DCXRQ7Z4W1 244 aa14.32□□□□□ -0.12
COL9A1-210ENST00000493682 VMO1Q7Z5L0 202 aa14.32□□□□□ -0.12
COL9A1-210ENST00000493682 ZSCAN4Q8NAM6 433 aaPredicted RBP14.32□□□□□ -0.12
COL9A1-210ENST00000493682 OR51L1Q8NGJ5 315 aa14.32□□□□□ -0.12
COL9A1-210ENST00000493682 OR2T4Q8NH00 348 aa14.32□□□□□ -0.12
COL9A1-210ENST00000493682 GNPDA2Q8TDQ7 276 aa14.32□□□□□ -0.12
COL9A1-210ENST00000493682 PKP2Q99959 881 aa14.32□□□□□ -0.12
COL9A1-210ENST00000493682 COPS4Q9BT78 406 aa14.32□□□□□ -0.12
COL9A1-210ENST00000493682 DPAGT1Q9H3H5 408 aa14.32□□□□□ -0.12
COL9A1-210ENST00000493682 EGLN3Q9H6Z9 239 aa14.32□□□□□ -0.12
COL9A1-210ENST00000493682 N6AMT1Q9Y5N5 214 aa14.32□□□□□ -0.12
COL9A1-210ENST00000493682 KPTNQ9Y664 436 aa14.32□□□□□ -0.12
COL9A1-210ENST00000493682 A0A1B0GW55 424 aa14.31□□□□□ -0.12
COL9A1-210ENST00000493682 SLC22A31A6NKX4 558 aa14.31□□□□□ -0.12
COL9A1-210ENST00000493682 DUX4L2P0CJ85 424 aa14.31□□□□□ -0.12
COL9A1-210ENST00000493682 DUX4L3P0CJ86 424 aa14.31□□□□□ -0.12
COL9A1-210ENST00000493682 DUX4L4P0CJ87 422 aa14.31□□□□□ -0.12
COL9A1-210ENST00000493682 DUX4L5P0CJ88 424 aa14.31□□□□□ -0.12
COL9A1-210ENST00000493682 DUX4L6P0CJ89 424 aa14.31□□□□□ -0.12
COL9A1-210ENST00000493682 DUX4L7P0CJ90 424 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms