RNA–Protein interactions for RNA: ENST00000493648.1

TOP3A-207, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 503 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-207ENST00000493648 TMEFF2Q9UIK5 374 aaPredicted RBP5.9□□□□□ -1.46
TOP3A-207ENST00000493648 PCDHB10Q9UN67 800 aa5.9□□□□□ -1.46
TOP3A-207ENST00000493648 MALRD1Q5VYJ5 2156 aa5.9□□□□□ -1.47
TOP3A-207ENST00000493648 NIPBLQ6KC79 2804 aaeCLIP5.89□□□□□ -1.47
TOP3A-207ENST00000493648 TRAV20A0A0B4J274 112 aa5.89□□□□□ -1.47
TOP3A-207ENST00000493648 A0A1B0GWJ7 208 aa5.89□□□□□ -1.47
TOP3A-207ENST00000493648 CCDC182A6NF36 153 aa5.89□□□□□ -1.47
TOP3A-207ENST00000493648 ACOD1A6NK06 481 aa5.89□□□□□ -1.47
TOP3A-207ENST00000493648 FAM157AC9JC47 383 aa5.89□□□□□ -1.47
TOP3A-207ENST00000493648 ZNF670-ZNF695F2Z2N8 137 aa5.89□□□□□ -1.47
TOP3A-207ENST00000493648 H3BNX3 289 aa5.89□□□□□ -1.47
TOP3A-207ENST00000493648 TMEM178BH3BS89 294 aa5.89□□□□□ -1.47
TOP3A-207ENST00000493648 PHYHO14832 338 aa5.89□□□□□ -1.47
TOP3A-207ENST00000493648 MLNRO43193 412 aa5.89□□□□□ -1.47
TOP3A-207ENST00000493648 ZNF254O75437 659 aa5.89□□□□□ -1.47
TOP3A-207ENST00000493648 MSMBP08118 114 aa5.89□□□□□ -1.47
TOP3A-207ENST00000493648 MRPL3P09001 348 aaKnown RBP5.89□□□□□ -1.47
TOP3A-207ENST00000493648 IRF2P14316 349 aa5.89□□□□□ -1.47
TOP3A-207ENST00000493648 CA6P23280 308 aa5.89□□□□□ -1.47
TOP3A-207ENST00000493648 CPT2P23786 658 aa5.89□□□□□ -1.47
TOP3A-207ENST00000493648 EPHA2P29317 976 aa5.89□□□□□ -1.47
TOP3A-207ENST00000493648 POLR2IP36954 125 aaKnown RBP5.89□□□□□ -1.47
TOP3A-207ENST00000493648 ALDH3A2P51648 485 aa5.89□□□□□ -1.47
TOP3A-207ENST00000493648 HCCSP53701 268 aa5.89□□□□□ -1.47
TOP3A-207ENST00000493648 CDC42P60953 191 aa5.89□□□□□ -1.47
TOP3A-207ENST00000493648 BTG1P62324 171 aa5.89□□□□□ -1.47
TOP3A-207ENST00000493648 TMEM155Q4W5P6 130 aa5.89□□□□□ -1.47
TOP3A-207ENST00000493648 FAM120AOSQ5T036 256 aa5.89□□□□□ -1.47
TOP3A-207ENST00000493648 AADACL4Q5VUY2 407 aa5.89□□□□□ -1.47
TOP3A-207ENST00000493648 LRRN1Q6UXK5 716 aa5.89□□□□□ -1.47
TOP3A-207ENST00000493648 MOGAT3Q86VF5 341 aa5.89□□□□□ -1.47
TOP3A-207ENST00000493648 LRRC28Q86X40 367 aaPredicted RBP5.89□□□□□ -1.47
TOP3A-207ENST00000493648 C1orf87Q8N0U7 546 aa5.89□□□□□ -1.47
TOP3A-207ENST00000493648 MUC20Q8N307 709 aaPredicted RBP5.89□□□□□ -1.47
TOP3A-207ENST00000493648 KLHL36Q8N4N3 616 aa5.89□□□□□ -1.47
TOP3A-207ENST00000493648 SPICQ8N5J4 248 aa5.89□□□□□ -1.47
TOP3A-207ENST00000493648 PLPP7Q8NBV4 271 aa5.89□□□□□ -1.47
TOP3A-207ENST00000493648 CSNK2A3Q8NEV1 391 aa5.89□□□□□ -1.47
TOP3A-207ENST00000493648 OR8J1Q8NGP2 316 aa5.89□□□□□ -1.47
TOP3A-207ENST00000493648 OR11L1Q8NGX0 322 aa5.89□□□□□ -1.47
TOP3A-207ENST00000493648 OR51F2Q8NH61 342 aa5.89□□□□□ -1.47
TOP3A-207ENST00000493648 TRUB1Q8WWH5 349 aaKnown RBP5.89□□□□□ -1.47
TOP3A-207ENST00000493648 SPSB4Q96A44 273 aa5.89□□□□□ -1.47
TOP3A-207ENST00000493648 TMEM186Q96B77 213 aa5.89□□□□□ -1.47
TOP3A-207ENST00000493648 REEP6Q96HR9 211 aa5.89□□□□□ -1.47
TOP3A-207ENST00000493648 AMELYQ99218 206 aa5.89□□□□□ -1.47
TOP3A-207ENST00000493648 CNN2Q99439 309 aaKnown RBP5.89□□□□□ -1.47
TOP3A-207ENST00000493648 C9orf16Q9BUW7 83 aa5.89□□□□□ -1.47
TOP3A-207ENST00000493648 GABARAPL3Q9BY60 117 aa5.89□□□□□ -1.47
TOP3A-207ENST00000493648 RIBC2Q9H4K1 309 aa5.89□□□□□ -1.47
TOP3A-207ENST00000493648 RGCCQ9H4X1 137 aa5.89□□□□□ -1.47
TOP3A-207ENST00000493648 FN3KRPQ9HA64 309 aa5.89□□□□□ -1.47
TOP3A-207ENST00000493648 S100A14Q9HCY8 104 aa5.89□□□□□ -1.47
TOP3A-207ENST00000493648 C14orf119Q9NWQ9 140 aa5.89□□□□□ -1.47
TOP3A-207ENST00000493648 HIF1ANQ9NWT6 349 aa5.89□□□□□ -1.47
TOP3A-207ENST00000493648 HAO2Q9NYQ3 351 aa5.89□□□□□ -1.47
TOP3A-207ENST00000493648 UBAP1Q9NZ09 502 aa5.89□□□□□ -1.47
TOP3A-207ENST00000493648 USE1Q9NZ43 259 aa5.89□□□□□ -1.47
TOP3A-207ENST00000493648 WARS2Q9UGM6 360 aaKnown RBP5.89□□□□□ -1.47
TOP3A-207ENST00000493648 TLN2Q9Y4G6 2542 aa5.89□□□□□ -1.47
TOP3A-207ENST00000493648 TANC2Q9HCD6 1990 aa5.89□□□□□ -1.47
TOP3A-207ENST00000493648 ZANQ9Y493 2812 aa5.89□□□□□ -1.47
TOP3A-207ENST00000493648 FN1P02751 2386 aaKnown RBP5.88□□□□□ -1.47
TOP3A-207ENST00000493648 PPIAL4EA0A075B759 164 aa5.88□□□□□ -1.47
TOP3A-207ENST00000493648 IGHV3-64DA0A0J9YX35 117 aa5.88□□□□□ -1.47
TOP3A-207ENST00000493648 TMEM269A0A1B0GVZ9 245 aa5.88□□□□□ -1.47
TOP3A-207ENST00000493648 C5orf63A6NC05 138 aa5.88□□□□□ -1.47
TOP3A-207ENST00000493648 PPIAL4DF5H284 164 aa5.88□□□□□ -1.47
TOP3A-207ENST00000493648 PLPP2O43688 288 aa5.88□□□□□ -1.47
TOP3A-207ENST00000493648 IGHV2-70P01814 119 aa5.88□□□□□ -1.47
TOP3A-207ENST00000493648 IGHV2-5P01817 119 aa5.88□□□□□ -1.47
TOP3A-207ENST00000493648 ALPLP05186 524 aa5.88□□□□□ -1.47
TOP3A-207ENST00000493648 FAM157CP0CG43 387 aa5.88□□□□□ -1.47
TOP3A-207ENST00000493648 PPIAL4FP0DN26 164 aa5.88□□□□□ -1.47
TOP3A-207ENST00000493648 SRD5A1P18405 259 aa5.88□□□□□ -1.47
TOP3A-207ENST00000493648 DCTDP32321 178 aa5.88□□□□□ -1.47
TOP3A-207ENST00000493648 ATP6V1E1P36543 226 aa5.88□□□□□ -1.47
TOP3A-207ENST00000493648 SRP14P37108 136 aaKnown RBP5.88□□□□□ -1.47
TOP3A-207ENST00000493648 GNALP38405 381 aa5.88□□□□□ -1.47
TOP3A-207ENST00000493648 MDH2P40926 338 aaKnown RBP5.88□□□□□ -1.47
TOP3A-207ENST00000493648 CD200P41217 278 aa5.88□□□□□ -1.47
TOP3A-207ENST00000493648 GATA4P43694 442 aa5.88□□□□□ -1.47
TOP3A-207ENST00000493648 GSK3AP49840 483 aa5.88□□□□□ -1.47
TOP3A-207ENST00000493648 MMP16P51512 607 aa5.88□□□□□ -1.47
TOP3A-207ENST00000493648 RIDAP52758 137 aaKnown RBP5.88□□□□□ -1.47
TOP3A-207ENST00000493648 PRSS12P56730 875 aa5.88□□□□□ -1.47
TOP3A-207ENST00000493648 FAM3AP98173 230 aa5.88□□□□□ -1.47
TOP3A-207ENST00000493648 POU4F2Q12837 409 aa5.88□□□□□ -1.47
TOP3A-207ENST00000493648 MAB21L1Q13394 359 aa5.88□□□□□ -1.47
TOP3A-207ENST00000493648 TMED1Q13445 227 aa5.88□□□□□ -1.47
TOP3A-207ENST00000493648 ZNF181Q2M3W8 571 aa5.88□□□□□ -1.47
TOP3A-207ENST00000493648 CR1LQ2VPA4 569 aa5.88□□□□□ -1.47
TOP3A-207ENST00000493648 GFOD2Q3B7J2 385 aa5.88□□□□□ -1.47
TOP3A-207ENST00000493648 ZIK1Q3SY52 487 aaPredicted RBP5.88□□□□□ -1.47
TOP3A-207ENST00000493648 FAHD2BQ6P2I3 314 aaPredicted RBP5.88□□□□□ -1.47
TOP3A-207ENST00000493648 ZBTB49Q6ZSB9 765 aa5.88□□□□□ -1.47
TOP3A-207ENST00000493648 PRSS45Q7RTY3 260 aa5.88□□□□□ -1.47
TOP3A-207ENST00000493648 BCDIN3DQ7Z5W3 292 aaKnown RBP5.88□□□□□ -1.47
TOP3A-207ENST00000493648 SLC35F2Q8IXU6 374 aa5.88□□□□□ -1.47
TOP3A-207ENST00000493648 ZNF679Q8IYX0 411 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms