RNA–Protein interactions for RNA: ENST00000493601.5

PTPRU-208, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 695 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-208ENST00000493601 LYPD4Q6UWN0 246 aa13.81□□□□□ -0.2
PTPRU-208ENST00000493601 DEFB107AQ8IZN7 70 aa13.81□□□□□ -0.2
PTPRU-208ENST00000493601 LNX2Q8N448 690 aa13.81□□□□□ -0.2
PTPRU-208ENST00000493601 PNLDC1Q8NA58 520 aaKnown RBP13.81□□□□□ -0.2
PTPRU-208ENST00000493601 SLC37A3Q8NCC5 494 aa13.81□□□□□ -0.2
PTPRU-208ENST00000493601 OR56B2PQ8NGI1 322 aa13.81□□□□□ -0.2
PTPRU-208ENST00000493601 OR51L1Q8NGJ5 315 aa13.81□□□□□ -0.2
PTPRU-208ENST00000493601 OR8D4Q8NGM9 314 aa13.81□□□□□ -0.2
PTPRU-208ENST00000493601 OR9Q1Q8NGQ5 310 aa13.81□□□□□ -0.2
PTPRU-208ENST00000493601 TMIGD2Q96BF3 282 aa13.81□□□□□ -0.2
PTPRU-208ENST00000493601 SLAMF6Q96DU3 332 aa13.81□□□□□ -0.2
PTPRU-208ENST00000493601 KCNJ15Q99712 375 aa13.81□□□□□ -0.2
PTPRU-208ENST00000493601 PCGF1Q9BSM1 259 aa13.81□□□□□ -0.2
PTPRU-208ENST00000493601 SLITRK2Q9H156 845 aa13.81□□□□□ -0.2
PTPRU-208ENST00000493601 NOX4Q9NPH5 578 aa13.81□□□□□ -0.2
PTPRU-208ENST00000493601 C14orf119Q9NWQ9 140 aa13.81□□□□□ -0.2
PTPRU-208ENST00000493601 C1orf123Q9NWV4 160 aa13.81□□□□□ -0.2
PTPRU-208ENST00000493601 CTSZQ9UBR2 303 aa13.81□□□□□ -0.2
PTPRU-208ENST00000493601 BAIAP2Q9UQB8 552 aa13.81□□□□□ -0.2
PTPRU-208ENST00000493601 hCG_1807616A0A1W2PRN6 198 aa13.8□□□□□ -0.2
PTPRU-208ENST00000493601 A6NLC8 198 aa13.8□□□□□ -0.2
PTPRU-208ENST00000493601 ZNF879B4DU55 563 aa13.8□□□□□ -0.2
PTPRU-208ENST00000493601 P2RY10O00398 339 aa13.8□□□□□ -0.2
PTPRU-208ENST00000493601 ADAM20O43506 726 aa13.8□□□□□ -0.2
PTPRU-208ENST00000493601 TOX4O94842 621 aa13.8□□□□□ -0.2
PTPRU-208ENST00000493601 CCNB2O95067 398 aa13.8□□□□□ -0.2
PTPRU-208ENST00000493601 MDKP21741 143 aaPredicted RBP13.8□□□□□ -0.2
PTPRU-208ENST00000493601 CFHR2P36980 270 aa13.8□□□□□ -0.2
PTPRU-208ENST00000493601 MAGEA2P43356 314 aa13.8□□□□□ -0.2
PTPRU-208ENST00000493601 HOXA4Q00056 320 aaPredicted RBP13.8□□□□□ -0.2
PTPRU-208ENST00000493601 CRMP1Q14194 572 aa13.8□□□□□ -0.2
PTPRU-208ENST00000493601 PCK2Q16822 640 aa13.8□□□□□ -0.2
PTPRU-208ENST00000493601 ZNF770Q6IQ21 691 aaPredicted RBP13.8□□□□□ -0.2
PTPRU-208ENST00000493601 AQP11Q8NBQ7 271 aa13.8□□□□□ -0.2
PTPRU-208ENST00000493601 OR6K6Q8NGW6 343 aa13.8□□□□□ -0.2
PTPRU-208ENST00000493601 ZNRF4Q8WWF5 429 aa13.8□□□□□ -0.2
PTPRU-208ENST00000493601 CENPMQ9NSP4 180 aa13.8□□□□□ -0.2
PTPRU-208ENST00000493601 ARL8BQ9NVJ2 186 aa13.8□□□□□ -0.2
PTPRU-208ENST00000493601 MMP24Q9Y5R2 645 aa13.8□□□□□ -0.2
PTPRU-208ENST00000493601 A0A1B0GUS0 222 aa13.79□□□□□ -0.2
PTPRU-208ENST00000493601 C5orf63A6NC05 138 aa13.79□□□□□ -0.2
PTPRU-208ENST00000493601 ANKRD30BLA7E2S9 258 aa13.79□□□□□ -0.2
PTPRU-208ENST00000493601 ZNF593O00488 134 aaPredicted RBP13.79□□□□□ -0.2
PTPRU-208ENST00000493601 ATP8B1O43520 1251 aa13.79□□□□□ -0.2
PTPRU-208ENST00000493601 DCTN3O75935 186 aa13.79□□□□□ -0.2
PTPRU-208ENST00000493601 GASTP01350 101 aa13.79□□□□□ -0.2
PTPRU-208ENST00000493601 IFNGP01579 166 aa13.79□□□□□ -0.2
PTPRU-208ENST00000493601 GRPP07492 148 aa13.79□□□□□ -0.2
PTPRU-208ENST00000493601 SFTPBP07988 381 aa13.79□□□□□ -0.2
PTPRU-208ENST00000493601 SLC2A1P11166 492 aa13.79□□□□□ -0.2
PTPRU-208ENST00000493601 SPI1P17947 270 aa13.79□□□□□ -0.2
PTPRU-208ENST00000493601 ANOS1P23352 680 aa13.79□□□□□ -0.2
PTPRU-208ENST00000493601 DDOSTP39656 456 aa13.79□□□□□ -0.2
PTPRU-208ENST00000493601 SLC15A1P46059 708 aa13.79□□□□□ -0.2
PTPRU-208ENST00000493601 PRKXP51817 358 aa13.79□□□□□ -0.2
PTPRU-208ENST00000493601 BLVRAP53004 296 aa13.79□□□□□ -0.2
PTPRU-208ENST00000493601 SLC25A1P53007 311 aa13.79□□□□□ -0.2
PTPRU-208ENST00000493601 GRB2P62993 217 aaKnown RBP13.79□□□□□ -0.2
PTPRU-208ENST00000493601 C11orf91Q3C1V1 193 aa13.79□□□□□ -0.2
PTPRU-208ENST00000493601 TEX30Q5JUR7 227 aa13.79□□□□□ -0.2
PTPRU-208ENST00000493601 ZNF362Q5T0B9 420 aaPredicted RBP13.79□□□□□ -0.2
PTPRU-208ENST00000493601 METTL11BQ5VVY1 283 aa13.79□□□□□ -0.2
PTPRU-208ENST00000493601 CYP2R1Q6VVX0 501 aa13.79□□□□□ -0.2
PTPRU-208ENST00000493601 TMEM86BQ8N661 226 aa13.79□□□□□ -0.2
PTPRU-208ENST00000493601 OR2T33Q8NG76 320 aa13.79□□□□□ -0.2
PTPRU-208ENST00000493601 GATAD2BQ8WXI9 593 aa13.79□□□□□ -0.2
PTPRU-208ENST00000493601 SPSB4Q96A44 273 aa13.79□□□□□ -0.2
PTPRU-208ENST00000493601 FAM71F1Q96KD3 344 aaPredicted RBP13.79□□□□□ -0.2
PTPRU-208ENST00000493601 TSSK6Q9BXA6 273 aa13.79□□□□□ -0.2
PTPRU-208ENST00000493601 NMNAT2Q9BZQ4 307 aa13.79□□□□□ -0.2
PTPRU-208ENST00000493601 SMURF1Q9HCE7 757 aa13.79□□□□□ -0.2
PTPRU-208ENST00000493601 ACTR3BQ9P1U1 418 aa13.79□□□□□ -0.2
PTPRU-208ENST00000493601 ARL2BPQ9Y2Y0 163 aa13.79□□□□□ -0.2
PTPRU-208ENST00000493601 N6AMT1Q9Y5N5 214 aa13.79□□□□□ -0.2
PTPRU-208ENST00000493601 RIIAD1A6NNX1 92 aa13.78□□□□□ -0.2
PTPRU-208ENST00000493601 GYPAP02724 150 aa13.78□□□□□ -0.2
PTPRU-208ENST00000493601 CRYBA1P05813 215 aa13.78□□□□□ -0.2
PTPRU-208ENST00000493601 GYPBP06028 91 aa13.78□□□□□ -0.2
PTPRU-208ENST00000493601 MMP9P14780 707 aa13.78□□□□□ -0.2
PTPRU-208ENST00000493601 ZNF3P17036 446 aa13.78□□□□□ -0.2
PTPRU-208ENST00000493601 ATP6V1B2P21281 511 aa13.78□□□□□ -0.2
PTPRU-208ENST00000493601 CX3CR1P49238 355 aa13.78□□□□□ -0.2
PTPRU-208ENST00000493601 MNAT1P51948 309 aa13.78□□□□□ -0.2
PTPRU-208ENST00000493601 PDCD1Q15116 288 aa13.78□□□□□ -0.2
PTPRU-208ENST00000493601 RUSC1-AS1Q66K80 236 aa13.78□□□□□ -0.2
PTPRU-208ENST00000493601 TREML4Q6UXN2 200 aa13.78□□□□□ -0.2
PTPRU-208ENST00000493601 Q6YL49 198 aa13.78□□□□□ -0.2
PTPRU-208ENST00000493601 FAM90A1Q86YD7 464 aa13.78□□□□□ -0.2
PTPRU-208ENST00000493601 ZNF511Q8NB15 262 aa13.78□□□□□ -0.2
PTPRU-208ENST00000493601 OR8S1Q8NH09 359 aa13.78□□□□□ -0.2
PTPRU-208ENST00000493601 OR4F5Q8NH21 305 aa13.78□□□□□ -0.2
PTPRU-208ENST00000493601 TAF15Q92804 592 aaKnown RBP eCLIP13.78□□□□□ -0.2
PTPRU-208ENST00000493601 WDFY2Q96P53 400 aa13.78□□□□□ -0.2
PTPRU-208ENST00000493601 TOR3AQ9H497 397 aa13.78□□□□□ -0.2
PTPRU-208ENST00000493601 MAGIXQ9H6Y5 334 aa13.78□□□□□ -0.2
PTPRU-208ENST00000493601 SP140LQ9H930 580 aa13.78□□□□□ -0.2
PTPRU-208ENST00000493601 MARCH7Q9H992 704 aa13.78□□□□□ -0.2
PTPRU-208ENST00000493601 POMT1Q9Y6A1 747 aa13.78□□□□□ -0.2
PTPRU-208ENST00000493601 TRRAPQ9Y4A5 3859 aa13.78□□□□□ -0.2
PTPRU-208ENST00000493601 DHRS12A0PJE2 317 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms