RNA–Protein interactions for RNA: ENST00000489927.1

PLOD3-216, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-216ENST00000489927 TRIM36Q9NQ86 728 aa13.11□□□□□ -0.31
PLOD3-216ENST00000489927 MRPL15Q9P015 296 aaKnown RBP13.11□□□□□ -0.31
PLOD3-216ENST00000489927 GGT3PA6NGU5 568 aa13.1□□□□□ -0.31
PLOD3-216ENST00000489927 DVL1O14640 695 aa13.1□□□□□ -0.31
PLOD3-216ENST00000489927 OR10H3O60404 316 aa13.1□□□□□ -0.31
PLOD3-216ENST00000489927 GRPP07492 148 aa13.1□□□□□ -0.31
PLOD3-216ENST00000489927 NUDT2P50583 147 aa13.1□□□□□ -0.31
PLOD3-216ENST00000489927 PROK1P58294 105 aa13.1□□□□□ -0.31
PLOD3-216ENST00000489927 POU4F2Q12837 409 aa13.1□□□□□ -0.31
PLOD3-216ENST00000489927 TAF9Q16594 264 aa13.1□□□□□ -0.31
PLOD3-216ENST00000489927 GLYATL3Q5SZD4 288 aa13.1□□□□□ -0.31
PLOD3-216ENST00000489927 GLYATQ6IB77 296 aa13.1□□□□□ -0.31
PLOD3-216ENST00000489927 HACD2Q6Y1H2 254 aa13.1□□□□□ -0.31
PLOD3-216ENST00000489927 LDLRAD3Q86YD5 345 aa13.1□□□□□ -0.31
PLOD3-216ENST00000489927 PIP4P2Q8N4L2 257 aa13.1□□□□□ -0.31
PLOD3-216ENST00000489927 GCSAMQ8N6F7 178 aa13.1□□□□□ -0.31
PLOD3-216ENST00000489927 SCCPDHQ8NBX0 429 aa13.1□□□□□ -0.31
PLOD3-216ENST00000489927 NSRP1Q9H0G5 558 aaKnown RBP13.1□□□□□ -0.31
PLOD3-216ENST00000489927 DCAF13Q9NV06 445 aaKnown RBP13.1□□□□□ -0.31
PLOD3-216ENST00000489927 ABCD2Q9UBJ2 740 aa13.1□□□□□ -0.31
PLOD3-216ENST00000489927 KCNG2Q9UJ96 466 aa13.1□□□□□ -0.31
PLOD3-216ENST00000489927 SAMD4AQ9UPU9 718 aaKnown RBP13.1□□□□□ -0.31
PLOD3-216ENST00000489927 WNK1Q9H4A3 2382 aa13.1□□□□□ -0.31
PLOD3-216ENST00000489927 IGHV3OR15-7A0A075B7D8 119 aa13.09□□□□□ -0.31
PLOD3-216ENST00000489927 A6NLC8 198 aa13.09□□□□□ -0.31
PLOD3-216ENST00000489927 NDUFAB1O14561 156 aa13.09□□□□□ -0.31
PLOD3-216ENST00000489927 ECDO95905 644 aaPredicted RBP13.09□□□□□ -0.31
PLOD3-216ENST00000489927 LHBP01229 141 aa13.09□□□□□ -0.31
PLOD3-216ENST00000489927 PSKH1P11801 424 aa13.09□□□□□ -0.31
PLOD3-216ENST00000489927 H2AFXP16104 143 aaPredicted RBP13.09□□□□□ -0.31
PLOD3-216ENST00000489927 ZNF823P16415 610 aa13.09□□□□□ -0.31
PLOD3-216ENST00000489927 OTX1P32242 354 aaPredicted RBP13.09□□□□□ -0.31
PLOD3-216ENST00000489927 SLC35F1Q5T1Q4 408 aa13.09□□□□□ -0.31
PLOD3-216ENST00000489927 FGFRL1Q8N441 504 aa13.09□□□□□ -0.31
PLOD3-216ENST00000489927 LNX2Q8N448 690 aa13.09□□□□□ -0.31
PLOD3-216ENST00000489927 V9GYQ6 96 aa13.09□□□□□ -0.31
PLOD3-216ENST00000489927 A0A1B0GW55 424 aa13.08□□□□□ -0.32
PLOD3-216ENST00000489927 hCG_1807616A0A1W2PRN6 198 aa13.08□□□□□ -0.32
PLOD3-216ENST00000489927 SLC22A31A6NKX4 558 aa13.08□□□□□ -0.32
PLOD3-216ENST00000489927 BHLHE40O14503 412 aa13.08□□□□□ -0.32
PLOD3-216ENST00000489927 IDH3BO43837 385 aa13.08□□□□□ -0.32
PLOD3-216ENST00000489927 GADD45GO95257 159 aa13.08□□□□□ -0.32
PLOD3-216ENST00000489927 TSPAN15O95858 294 aa13.08□□□□□ -0.32
PLOD3-216ENST00000489927 DUX4L2P0CJ85 424 aa13.08□□□□□ -0.32
PLOD3-216ENST00000489927 DUX4L3P0CJ86 424 aa13.08□□□□□ -0.32
PLOD3-216ENST00000489927 DUX4L4P0CJ87 422 aa13.08□□□□□ -0.32
PLOD3-216ENST00000489927 DUX4L5P0CJ88 424 aa13.08□□□□□ -0.32
PLOD3-216ENST00000489927 DUX4L6P0CJ89 424 aa13.08□□□□□ -0.32
PLOD3-216ENST00000489927 DUX4L7P0CJ90 424 aa13.08□□□□□ -0.32
PLOD3-216ENST00000489927 PYCR1P32322 319 aa13.08□□□□□ -0.32
PLOD3-216ENST00000489927 PSME3P61289 254 aa13.08□□□□□ -0.32
PLOD3-216ENST00000489927 SPIBQ01892 262 aa13.08□□□□□ -0.32
PLOD3-216ENST00000489927 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.08□□□□□ -0.32
PLOD3-216ENST00000489927 C11orf91Q3C1V1 193 aa13.08□□□□□ -0.32
PLOD3-216ENST00000489927 CDONQ4KMG0 1287 aa13.08□□□□□ -0.32
PLOD3-216ENST00000489927 TEX36Q5VZQ5 186 aa13.08□□□□□ -0.32
PLOD3-216ENST00000489927 DUX4L9Q6RFH8 374 aaPredicted RBP13.08□□□□□ -0.32
PLOD3-216ENST00000489927 LYPD4Q6UWN0 246 aa13.08□□□□□ -0.32
PLOD3-216ENST00000489927 DRAM2Q6UX65 266 aa13.08□□□□□ -0.32
PLOD3-216ENST00000489927 Q6ZSV7 163 aa13.08□□□□□ -0.32
PLOD3-216ENST00000489927 VMO1Q7Z5L0 202 aa13.08□□□□□ -0.32
PLOD3-216ENST00000489927 SPERTQ8NA61 448 aa13.08□□□□□ -0.32
PLOD3-216ENST00000489927 ZSCAN4Q8NAM6 433 aaPredicted RBP13.08□□□□□ -0.32
PLOD3-216ENST00000489927 OR56B2PQ8NGI1 322 aa13.08□□□□□ -0.32
PLOD3-216ENST00000489927 ZNRF4Q8WWF5 429 aa13.08□□□□□ -0.32
PLOD3-216ENST00000489927 ST8SIA4Q92187 359 aa13.08□□□□□ -0.32
PLOD3-216ENST00000489927 SEMA6AQ9H2E6 1030 aa13.08□□□□□ -0.32
PLOD3-216ENST00000489927 DPAGT1Q9H3H5 408 aa13.08□□□□□ -0.32
PLOD3-216ENST00000489927 CNTD2Q9H8S5 307 aa13.08□□□□□ -0.32
PLOD3-216ENST00000489927 TCF7L1Q9HCS4 588 aa13.08□□□□□ -0.32
PLOD3-216ENST00000489927 ARGLU1Q9NWB6 273 aaPredicted RBP13.08□□□□□ -0.32
PLOD3-216ENST00000489927 ADA2Q9NZK5 511 aa13.08□□□□□ -0.32
PLOD3-216ENST00000489927 DUX4Q9UBX2 424 aa13.08□□□□□ -0.32
PLOD3-216ENST00000489927 RPUSD1Q9UJJ7 312 aaKnown RBP13.08□□□□□ -0.32
PLOD3-216ENST00000489927 TVP23AA6NH52 213 aa13.07□□□□□ -0.32
PLOD3-216ENST00000489927 SEMG1P04279 462 aa13.07□□□□□ -0.32
PLOD3-216ENST00000489927 SLC2A1P11166 492 aa13.07□□□□□ -0.32
PLOD3-216ENST00000489927 SMIM11AP58511 58 aa13.07□□□□□ -0.32
PLOD3-216ENST00000489927 ELF3P78545 371 aaPredicted RBP13.07□□□□□ -0.32
PLOD3-216ENST00000489927 GDPGP1Q6ZNW5 385 aa13.07□□□□□ -0.32
PLOD3-216ENST00000489927 C1QL4Q86Z23 238 aa13.07□□□□□ -0.32
PLOD3-216ENST00000489927 RNF148Q8N7C7 305 aa13.07□□□□□ -0.32
PLOD3-216ENST00000489927 CYB561A3Q8NBI2 242 aa13.07□□□□□ -0.32
PLOD3-216ENST00000489927 PROKR2Q8NFJ6 384 aa13.07□□□□□ -0.32
PLOD3-216ENST00000489927 DDOQ99489 341 aa13.07□□□□□ -0.32
PLOD3-216ENST00000489927 COPS4Q9BT78 406 aa13.07□□□□□ -0.32
PLOD3-216ENST00000489927 C14orf119Q9NWQ9 140 aa13.07□□□□□ -0.32
PLOD3-216ENST00000489927 KAAG1Q9UBP8 84 aa13.07□□□□□ -0.32
PLOD3-216ENST00000489927 FAM96BQ9Y3D0 163 aa13.07□□□□□ -0.32
PLOD3-216ENST00000489927 N6AMT1Q9Y5N5 214 aa13.07□□□□□ -0.32
PLOD3-216ENST00000489927 KPTNQ9Y664 436 aa13.07□□□□□ -0.32
PLOD3-216ENST00000489927 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.06□□□□□ -0.32
PLOD3-216ENST00000489927 A0A1B0GVI7 797 aa13.06□□□□□ -0.32
PLOD3-216ENST00000489927 CCDC22O60826 627 aa13.06□□□□□ -0.32
PLOD3-216ENST00000489927 GSSP48637 474 aa13.06□□□□□ -0.32
PLOD3-216ENST00000489927 PRKXP51817 358 aa13.06□□□□□ -0.32
PLOD3-216ENST00000489927 MZT1Q08AG7 82 aa13.06□□□□□ -0.32
PLOD3-216ENST00000489927 PCK2Q16822 640 aa13.06□□□□□ -0.32
PLOD3-216ENST00000489927 DCXRQ7Z4W1 244 aa13.06□□□□□ -0.32
PLOD3-216ENST00000489927 WDR86Q86TI4 376 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms