RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 OR10J1P30954 320 aa4.26□□□□□ -1.73
SNRNP40-206ENST00000489853 NTSP30990 170 aa4.26□□□□□ -1.73
SNRNP40-206ENST00000489853 PSMB10P40306 273 aa4.26□□□□□ -1.73
SNRNP40-206ENST00000489853 CAMLGP49069 296 aa4.26□□□□□ -1.73
SNRNP40-206ENST00000489853 DIO1P49895 249 aa4.26□□□□□ -1.73
SNRNP40-206ENST00000489853 PDLIM4P50479 330 aa4.26□□□□□ -1.73
SNRNP40-206ENST00000489853 RND2P52198 227 aa4.26□□□□□ -1.73
SNRNP40-206ENST00000489853 POLR2HP52434 150 aaKnown RBP4.26□□□□□ -1.73
SNRNP40-206ENST00000489853 EFNB2P52799 333 aa4.26□□□□□ -1.73
SNRNP40-206ENST00000489853 FXYD6P3P58550 94 aa4.26□□□□□ -1.73
SNRNP40-206ENST00000489853 ADAM8P78325 824 aa4.26□□□□□ -1.73
SNRNP40-206ENST00000489853 SLC35A1P78382 337 aa4.26□□□□□ -1.73
SNRNP40-206ENST00000489853 SPOCK1Q08629 439 aa4.26□□□□□ -1.73
SNRNP40-206ENST00000489853 EFEMP1Q12805 493 aa4.26□□□□□ -1.73
SNRNP40-206ENST00000489853 HSPB3Q12988 150 aa4.26□□□□□ -1.73
SNRNP40-206ENST00000489853 IL15RAQ13261 267 aa4.26□□□□□ -1.73
SNRNP40-206ENST00000489853 ENPP2Q13822 863 aa4.26□□□□□ -1.73
SNRNP40-206ENST00000489853 CRMP1Q14194 572 aa4.26□□□□□ -1.73
SNRNP40-206ENST00000489853 CDKN3Q16667 212 aa4.26□□□□□ -1.73
SNRNP40-206ENST00000489853 ATP6V1FQ16864 119 aa4.26□□□□□ -1.73
SNRNP40-206ENST00000489853 C2orf76Q3KRA6 126 aa4.26□□□□□ -1.73
SNRNP40-206ENST00000489853 ALG10BQ5I7T1 473 aa4.26□□□□□ -1.73
SNRNP40-206ENST00000489853 PHF19Q5T6S3 580 aa4.26□□□□□ -1.73
SNRNP40-206ENST00000489853 OR8G2PQ6IF36 304 aa4.26□□□□□ -1.73
SNRNP40-206ENST00000489853 TIPARPQ7Z3E1 657 aaKnown RBP4.26□□□□□ -1.73
SNRNP40-206ENST00000489853 SZRD1Q7Z422 152 aa4.26□□□□□ -1.73
SNRNP40-206ENST00000489853 MDGA2Q7Z553 956 aa4.26□□□□□ -1.73
SNRNP40-206ENST00000489853 SLC35E3Q7Z769 313 aa4.26□□□□□ -1.73
SNRNP40-206ENST00000489853 ADIPOR2Q86V24 386 aa4.26□□□□□ -1.73
SNRNP40-206ENST00000489853 ZNF429Q86V71 674 aa4.26□□□□□ -1.73
SNRNP40-206ENST00000489853 FAM129CQ86XR2 697 aa4.26□□□□□ -1.73
SNRNP40-206ENST00000489853 FAM185AQ8N0U4 392 aa4.26□□□□□ -1.73
SNRNP40-206ENST00000489853 C11orf42Q8N5U0 333 aa4.26□□□□□ -1.73
SNRNP40-206ENST00000489853 ZNF321PQ8N8H1 164 aa4.26□□□□□ -1.73
SNRNP40-206ENST00000489853 AMER3Q8N944 861 aa4.26□□□□□ -1.73
SNRNP40-206ENST00000489853 NOXO1Q8NFA2 376 aa4.26□□□□□ -1.73
SNRNP40-206ENST00000489853 OR51D1Q8NGF3 324 aa4.26□□□□□ -1.73
SNRNP40-206ENST00000489853 OR52E1Q8NGJ3 308 aa4.26□□□□□ -1.73
SNRNP40-206ENST00000489853 OR51A2Q8NGJ7 313 aa4.26□□□□□ -1.73
SNRNP40-206ENST00000489853 C2orf15Q8WU43 125 aaKnown RBP4.26□□□□□ -1.73
SNRNP40-206ENST00000489853 ORAOV1Q8WV07 137 aa4.26□□□□□ -1.73
SNRNP40-206ENST00000489853 TMEM255BQ8WV15 326 aa4.26□□□□□ -1.73
SNRNP40-206ENST00000489853 UBE2E3Q969T4 207 aa4.26□□□□□ -1.73
SNRNP40-206ENST00000489853 TMEM106AQ96A25 262 aa4.26□□□□□ -1.73
SNRNP40-206ENST00000489853 TMEM18Q96B42 140 aa4.26□□□□□ -1.73
SNRNP40-206ENST00000489853 FAM3DQ96BQ1 224 aa4.26□□□□□ -1.73
SNRNP40-206ENST00000489853 MS4A6EQ96DS6 147 aa4.26□□□□□ -1.73
SNRNP40-206ENST00000489853 ACY3Q96HD9 319 aa4.26□□□□□ -1.73
SNRNP40-206ENST00000489853 C2orf50Q96LR7 162 aa4.26□□□□□ -1.73
SNRNP40-206ENST00000489853 JSRP1Q96MG2 331 aaPredicted RBP4.26□□□□□ -1.73
SNRNP40-206ENST00000489853 ALKBH3Q96Q83 286 aaPredicted RBP4.26□□□□□ -1.73
SNRNP40-206ENST00000489853 FAAP24Q9BTP7 215 aa4.26□□□□□ -1.73
SNRNP40-206ENST00000489853 HDAC8Q9BY41 377 aa4.26□□□□□ -1.73
SNRNP40-206ENST00000489853 OR2J1Q9GZK6 312 aa4.26□□□□□ -1.73
SNRNP40-206ENST00000489853 ZNF700Q9H0M5 742 aa4.26□□□□□ -1.73
SNRNP40-206ENST00000489853 SLC26A1Q9H2B4 701 aa4.26□□□□□ -1.73
SNRNP40-206ENST00000489853 CDH20Q9HBT6 801 aa4.26□□□□□ -1.73
SNRNP40-206ENST00000489853 SH3BGRL2Q9UJC5 107 aa4.26□□□□□ -1.73
SNRNP40-206ENST00000489853 PADI1Q9ULC6 663 aa4.26□□□□□ -1.73
SNRNP40-206ENST00000489853 MEMO1Q9Y316 297 aa4.26□□□□□ -1.73
SNRNP40-206ENST00000489853 TMED7Q9Y3B3 224 aa4.26□□□□□ -1.73
SNRNP40-206ENST00000489853 CASP8AP2Q9UKL3 1982 aa4.26□□□□□ -1.73
SNRNP40-206ENST00000489853 RANBP2P49792 3224 aaKnown RBP4.25□□□□□ -1.73
SNRNP40-206ENST00000489853 BORCS7-ASMTA0A0B4J1R7 106 aa4.25□□□□□ -1.73
SNRNP40-206ENST00000489853 RBFOX3A6NFN3 312 aa4.25□□□□□ -1.73
SNRNP40-206ENST00000489853 TMEM238C9JI98 176 aa4.25□□□□□ -1.73
SNRNP40-206ENST00000489853 M0QZQ0 153 aa4.25□□□□□ -1.73
SNRNP40-206ENST00000489853 NME2P1O60361 137 aa4.25□□□□□ -1.73
SNRNP40-206ENST00000489853 STK17BO94768 372 aa4.25□□□□□ -1.73
SNRNP40-206ENST00000489853 CLDN7O95471 211 aa4.25□□□□□ -1.73
SNRNP40-206ENST00000489853 HPRT1P00492 218 aa4.25□□□□□ -1.73
SNRNP40-206ENST00000489853 THY1P04216 161 aa4.25□□□□□ -1.73
SNRNP40-206ENST00000489853 CHRM2P08172 466 aa4.25□□□□□ -1.73
SNRNP40-206ENST00000489853 SELEP16581 610 aa4.25□□□□□ -1.73
SNRNP40-206ENST00000489853 ZNF28P17035 718 aa4.25□□□□□ -1.73
SNRNP40-206ENST00000489853 AKR1C4P17516 323 aa4.25□□□□□ -1.73
SNRNP40-206ENST00000489853 MAKP20794 623 aa4.25□□□□□ -1.73
SNRNP40-206ENST00000489853 RPL12P30050 165 aaKnown RBP4.25□□□□□ -1.73
SNRNP40-206ENST00000489853 HOXC8P31273 242 aa4.25□□□□□ -1.73
SNRNP40-206ENST00000489853 BMI1P35226 326 aa4.25□□□□□ -1.73
SNRNP40-206ENST00000489853 TSFMP43897 325 aaKnown RBP4.25□□□□□ -1.73
SNRNP40-206ENST00000489853 RPL29P47914 159 aaKnown RBP4.25□□□□□ -1.73
SNRNP40-206ENST00000489853 TNFSF10P50591 281 aa4.25□□□□□ -1.73
SNRNP40-206ENST00000489853 RAB7AP51149 207 aa4.25□□□□□ -1.73
SNRNP40-206ENST00000489853 PTTG1IPP53801 180 aa4.25□□□□□ -1.73
SNRNP40-206ENST00000489853 SLC37A1P57057 533 aa4.25□□□□□ -1.73
SNRNP40-206ENST00000489853 RANP62826 216 aaKnown RBP4.25□□□□□ -1.73
SNRNP40-206ENST00000489853 B4GALNT1Q00973 533 aa4.25□□□□□ -1.73
SNRNP40-206ENST00000489853 TGM3Q08188 693 aa4.25□□□□□ -1.73
SNRNP40-206ENST00000489853 ZNF616Q08AN1 781 aa4.25□□□□□ -1.73
SNRNP40-206ENST00000489853 TNFAIP1Q13829 316 aa4.25□□□□□ -1.73
SNRNP40-206ENST00000489853 LASP1Q14847 261 aaKnown RBP4.25□□□□□ -1.73
SNRNP40-206ENST00000489853 RAB11BQ15907 218 aa4.25□□□□□ -1.73
SNRNP40-206ENST00000489853 TMEM128Q5BJH2 165 aa4.25□□□□□ -1.73
SNRNP40-206ENST00000489853 TMEM220Q6QAJ8 160 aa4.25□□□□□ -1.73
SNRNP40-206ENST00000489853 KIRREL2Q6UWL6 708 aa4.25□□□□□ -1.73
SNRNP40-206ENST00000489853 WDR88Q6ZMY6 472 aa4.25□□□□□ -1.73
SNRNP40-206ENST00000489853 CACUL1Q86Y37 369 aa4.25□□□□□ -1.73
SNRNP40-206ENST00000489853 ZNF584Q8IVC4 421 aa4.25□□□□□ -1.73
SNRNP40-206ENST00000489853 ZNF100Q8IYN0 542 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms