RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 SGK3Q96BR1 496 aa8.69□□□□□ -1.02
USP11-211ENST00000489111 S100PBPQ96BU1 408 aa8.69□□□□□ -1.02
USP11-211ENST00000489111 ADAT3Q96EY9 351 aaPredicted RBP8.69□□□□□ -1.02
USP11-211ENST00000489111 CNTNAP3BQ96NU0 1288 aa8.69□□□□□ -1.02
USP11-211ENST00000489111 USB1Q9BQ65 265 aaKnown RBP8.69□□□□□ -1.02
USP11-211ENST00000489111 CNTNAP3Q9BZ76 1288 aa8.69□□□□□ -1.02
USP11-211ENST00000489111 WDR12Q9GZL7 423 aaKnown RBP8.69□□□□□ -1.02
USP11-211ENST00000489111 ACTR6Q9GZN1 396 aa8.69□□□□□ -1.02
USP11-211ENST00000489111 OPA3Q9H6K4 179 aa8.69□□□□□ -1.02
USP11-211ENST00000489111 PLGRKTQ9HBL7 147 aa8.69□□□□□ -1.02
USP11-211ENST00000489111 ELOVL5Q9NYP7 299 aa8.69□□□□□ -1.02
USP11-211ENST00000489111 COMMD3Q9UBI1 195 aa8.69□□□□□ -1.02
USP11-211ENST00000489111 ADAM30Q9UKF2 790 aa8.69□□□□□ -1.02
USP11-211ENST00000489111 PIGLQ9Y2B2 252 aa8.69□□□□□ -1.02
USP11-211ENST00000489111 V9GYS6 101 aa8.69□□□□□ -1.02
USP11-211ENST00000489111 DSPP15924 2871 aaKnown RBP8.69□□□□□ -1.02
USP11-211ENST00000489111 LAMA5O15230 3695 aa8.69□□□□□ -1.02
USP11-211ENST00000489111 ITPR1Q14643 2758 aa8.68□□□□□ -1.02
USP11-211ENST00000489111 PRRC2CQ9Y520 2896 aaKnown RBP8.68□□□□□ -1.02
USP11-211ENST00000489111 ZZEF1O43149 2961 aa8.68□□□□□ -1.02
USP11-211ENST00000489111 A6NIN4 97 aa8.68□□□□□ -1.02
USP11-211ENST00000489111 IFITM5A6NNB3 132 aa8.68□□□□□ -1.02
USP11-211ENST00000489111 CLDN25C9JDP6 229 aa8.68□□□□□ -1.02
USP11-211ENST00000489111 C16orf97H3BN30 126 aa8.68□□□□□ -1.02
USP11-211ENST00000489111 J3QW42 95 aa8.68□□□□□ -1.02
USP11-211ENST00000489111 MAGEB3O15480 346 aa8.68□□□□□ -1.02
USP11-211ENST00000489111 SULT1B1O43704 296 aa8.68□□□□□ -1.02
USP11-211ENST00000489111 TMEM127O75204 238 aa8.68□□□□□ -1.02
USP11-211ENST00000489111 AGFG2O95081 481 aa8.68□□□□□ -1.02
USP11-211ENST00000489111 CELA3BP08861 270 aa8.68□□□□□ -1.02
USP11-211ENST00000489111 SLC2A2P11168 524 aaPredicted RBP8.68□□□□□ -1.02
USP11-211ENST00000489111 FAHP16930 419 aa8.68□□□□□ -1.02
USP11-211ENST00000489111 IGFBP3P17936 291 aaPredicted RBP8.68□□□□□ -1.02
USP11-211ENST00000489111 ADRA2CP18825 462 aa8.68□□□□□ -1.02
USP11-211ENST00000489111 BDKRB2P30411 391 aa8.68□□□□□ -1.02
USP11-211ENST00000489111 GSK3AP49840 483 aa8.68□□□□□ -1.02
USP11-211ENST00000489111 SPOCK1Q08629 439 aa8.68□□□□□ -1.02
USP11-211ENST00000489111 RIPPLY1Q0D2K3 151 aa8.68□□□□□ -1.02
USP11-211ENST00000489111 DYNC1I2Q13409 638 aaKnown RBP8.68□□□□□ -1.02
USP11-211ENST00000489111 ZNF846Q147U1 533 aa8.68□□□□□ -1.02
USP11-211ENST00000489111 PPA1Q15181 289 aa8.68□□□□□ -1.02
USP11-211ENST00000489111 RAB11BQ15907 218 aa8.68□□□□□ -1.02
USP11-211ENST00000489111 SPANXN2Q5MJ10 180 aa8.68□□□□□ -1.02
USP11-211ENST00000489111 HES5Q5TA89 166 aa8.68□□□□□ -1.02
USP11-211ENST00000489111 ALKBH2Q6NS38 261 aa8.68□□□□□ -1.02
USP11-211ENST00000489111 UNQ6126/PRO20091Q6UXV3 157 aa8.68□□□□□ -1.02
USP11-211ENST00000489111 COLCA1Q6ZS62 124 aa8.68□□□□□ -1.02
USP11-211ENST00000489111 LAX1Q8IWV1 398 aa8.68□□□□□ -1.02
USP11-211ENST00000489111 JAGN1Q8N5M9 183 aa8.68□□□□□ -1.02
USP11-211ENST00000489111 FAM169BQ8N8A8 192 aa8.68□□□□□ -1.02
USP11-211ENST00000489111 RELL2Q8NC24 303 aaPredicted RBP8.68□□□□□ -1.02
USP11-211ENST00000489111 DNAAF1Q8NEP3 725 aa8.68□□□□□ -1.02
USP11-211ENST00000489111 OR14K1Q8NGZ2 314 aa8.68□□□□□ -1.02
USP11-211ENST00000489111 TRMT10AQ8TBZ6 339 aaKnown RBP8.68□□□□□ -1.02
USP11-211ENST00000489111 C10orf35Q96D05 121 aa8.68□□□□□ -1.02
USP11-211ENST00000489111 SOX7Q9BT81 388 aa8.68□□□□□ -1.02
USP11-211ENST00000489111 MRI1Q9BV20 369 aa8.68□□□□□ -1.02
USP11-211ENST00000489111 C1QTNF6Q9BXI9 259 aa8.68□□□□□ -1.02
USP11-211ENST00000489111 OR51B6Q9H340 312 aa8.68□□□□□ -1.02
USP11-211ENST00000489111 ZCCHC4Q9H5U6 513 aa8.68□□□□□ -1.02
USP11-211ENST00000489111 NEK6Q9HC98 313 aa8.68□□□□□ -1.02
USP11-211ENST00000489111 TMEM138Q9NPI0 162 aa8.68□□□□□ -1.02
USP11-211ENST00000489111 PTTG3PQ9NZH4 202 aa8.68□□□□□ -1.02
USP11-211ENST00000489111 COQ3Q9NZJ6 369 aa8.68□□□□□ -1.02
USP11-211ENST00000489111 SLC25A15Q9Y619 301 aa8.68□□□□□ -1.02
USP11-211ENST00000489111 ATMQ13315 3056 aa8.68□□□□□ -1.02
USP11-211ENST00000489111 hCG_38984A0A1B0GV85 526 aa8.67□□□□□ -1.02
USP11-211ENST00000489111 GGT3PA6NGU5 568 aa8.67□□□□□ -1.02
USP11-211ENST00000489111 ACACBO00763 2458 aa8.67□□□□□ -1.02
USP11-211ENST00000489111 CTDSP2O14595 271 aa8.67□□□□□ -1.02
USP11-211ENST00000489111 ATXN7O15265 892 aaPredicted RBP8.67□□□□□ -1.02
USP11-211ENST00000489111 IGKV3-15P01624 115 aa8.67□□□□□ -1.02
USP11-211ENST00000489111 HCKP08631 526 aa8.67□□□□□ -1.02
USP11-211ENST00000489111 CECR9P0C854 216 aa8.67□□□□□ -1.02
USP11-211ENST00000489111 BMP4P12644 408 aa8.67□□□□□ -1.02
USP11-211ENST00000489111 ATF1P18846 271 aa8.67□□□□□ -1.02
USP11-211ENST00000489111 CHRNB4P30926 498 aa8.67□□□□□ -1.02
USP11-211ENST00000489111 DDOSTP39656 456 aa8.67□□□□□ -1.02
USP11-211ENST00000489111 WNT5AP41221 380 aa8.67□□□□□ -1.02
USP11-211ENST00000489111 ASCL1P50553 236 aa8.67□□□□□ -1.02
USP11-211ENST00000489111 ZNF83P51522 516 aa8.67□□□□□ -1.02
USP11-211ENST00000489111 ZNF92Q03936 586 aa8.67□□□□□ -1.02
USP11-211ENST00000489111 RFPL4BQ6ZWI9 263 aa8.67□□□□□ -1.02
USP11-211ENST00000489111 MYPOPQ86VE0 399 aaPredicted RBP8.67□□□□□ -1.02
USP11-211ENST00000489111 FJX1Q86VR8 437 aa8.67□□□□□ -1.02
USP11-211ENST00000489111 LIX1LQ8IVB5 337 aa8.67□□□□□ -1.02
USP11-211ENST00000489111 FTMTQ8N4E7 242 aa8.67□□□□□ -1.02
USP11-211ENST00000489111 PAQR4Q8N4S7 273 aaPredicted RBP8.67□□□□□ -1.02
USP11-211ENST00000489111 SAMD12Q8N8I0 201 aa8.67□□□□□ -1.02
USP11-211ENST00000489111 OR51A2Q8NGJ7 313 aa8.67□□□□□ -1.02
USP11-211ENST00000489111 SPSB4Q96A44 273 aa8.67□□□□□ -1.02
USP11-211ENST00000489111 FOXRED1Q96CU9 486 aaPredicted RBP8.67□□□□□ -1.02
USP11-211ENST00000489111 CPNE2Q96FN4 548 aaPredicted RBP8.67□□□□□ -1.02
USP11-211ENST00000489111 LRRC46Q96FV0 321 aa8.67□□□□□ -1.02
USP11-211ENST00000489111 ZNF75AQ96N20 296 aa8.67□□□□□ -1.02
USP11-211ENST00000489111 GFI1Q99684 422 aa8.67□□□□□ -1.02
USP11-211ENST00000489111 SLC30A2Q9BRI3 323 aa8.67□□□□□ -1.02
USP11-211ENST00000489111 CHST5Q9GZS9 411 aa8.67□□□□□ -1.02
USP11-211ENST00000489111 ABCB9Q9NP78 766 aa8.67□□□□□ -1.02
USP11-211ENST00000489111 AKIP1Q9NQ31 210 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms