RNA–Protein interactions for RNA: ENST00000488454.5

SKA1-204, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 3 BASIC

Gene SKA1, Length 669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-204ENST00000488454 PNPP00491 289 aa8.83□□□□□ -1
SKA1-204ENST00000488454 IGHV3-13P01766 116 aa8.83□□□□□ -1
SKA1-204ENST00000488454 RPSAP08865 295 aaKnown RBP8.83□□□□□ -1
SKA1-204ENST00000488454 LIPAP38571 399 aa8.83□□□□□ -1
SKA1-204ENST00000488454 GABARAPL2P60520 117 aa8.83□□□□□ -1
SKA1-204ENST00000488454 GK2Q14410 553 aaPredicted RBP8.83□□□□□ -1
SKA1-204ENST00000488454 HLXQ14774 488 aaPredicted RBP8.83□□□□□ -1
SKA1-204ENST00000488454 EFNB3Q15768 340 aa8.83□□□□□ -1
SKA1-204ENST00000488454 NKPD1Q17RQ9 610 aa8.83□□□□□ -1
SKA1-204ENST00000488454 GLYATL3Q5SZD4 288 aa8.83□□□□□ -1
SKA1-204ENST00000488454 OR2G6Q5TZ20 316 aa8.83□□□□□ -1
SKA1-204ENST00000488454 RNLSQ5VYX0 342 aa8.83□□□□□ -1
SKA1-204ENST00000488454 FBXW12Q6X9E4 464 aa8.83□□□□□ -1
SKA1-204ENST00000488454 PRSS45Q7RTY3 260 aa8.83□□□□□ -1
SKA1-204ENST00000488454 PRSS48Q7RTY5 328 aa8.83□□□□□ -1
SKA1-204ENST00000488454 KLBQ86Z14 1044 aa8.83□□□□□ -1
SKA1-204ENST00000488454 NANOGP1Q8N7R0 232 aa8.83□□□□□ -1
SKA1-204ENST00000488454 OR8B12Q8NGG6 310 aa8.83□□□□□ -1
SKA1-204ENST00000488454 GATAD2BQ8WXI9 593 aa8.83□□□□□ -1
SKA1-204ENST00000488454 RORBQ92753 470 aa8.83□□□□□ -1
SKA1-204ENST00000488454 PIGTQ969N2 578 aa8.83□□□□□ -1
SKA1-204ENST00000488454 SGK3Q96BR1 496 aa8.83□□□□□ -1
SKA1-204ENST00000488454 PELI1Q96FA3 418 aa8.83□□□□□ -1
SKA1-204ENST00000488454 REEP6Q96HR9 211 aa8.83□□□□□ -1
SKA1-204ENST00000488454 CCL19Q99731 98 aa8.83□□□□□ -1
SKA1-204ENST00000488454 ZNF649Q9BS31 505 aa8.83□□□□□ -1
SKA1-204ENST00000488454 MND1Q9BWT6 205 aa8.83□□□□□ -1
SKA1-204ENST00000488454 CDCA4Q9BXL8 241 aa8.83□□□□□ -1
SKA1-204ENST00000488454 MRPL37Q9BZE1 423 aaKnown RBP8.83□□□□□ -1
SKA1-204ENST00000488454 DYNLRB1Q9NP97 96 aa8.83□□□□□ -1
SKA1-204ENST00000488454 CYSLTR2Q9NS75 346 aa8.83□□□□□ -1
SKA1-204ENST00000488454 TAAR3PQ9P1P4 343 aa8.83□□□□□ -1
SKA1-204ENST00000488454 NUFIP1Q9UHK0 495 aaKnown RBP8.83□□□□□ -1
SKA1-204ENST00000488454 TRBV2A0A0J9YWF9 115 aa8.82□□□□□ -1
SKA1-204ENST00000488454 A0A0U1RQV5 110 aa8.82□□□□□ -1
SKA1-204ENST00000488454 MTRF1O75570 445 aaKnown RBP8.82□□□□□ -1
SKA1-204ENST00000488454 CLPTM1O96005 669 aa8.82□□□□□ -1
SKA1-204ENST00000488454 ERCC1P07992 297 aaPredicted RBP8.82□□□□□ -1
SKA1-204ENST00000488454 SOD3P08294 240 aa8.82□□□□□ -1
SKA1-204ENST00000488454 DANCRP0C864 163 aa8.82□□□□□ -1
SKA1-204ENST00000488454 DNASE1P24855 282 aa8.82□□□□□ -1
SKA1-204ENST00000488454 MPV17P39210 176 aa8.82□□□□□ -1
SKA1-204ENST00000488454 DDOSTP39656 456 aa8.82□□□□□ -1
SKA1-204ENST00000488454 GATA4P43694 442 aa8.82□□□□□ -1
SKA1-204ENST00000488454 TGM4P49221 684 aa8.82□□□□□ -1
SKA1-204ENST00000488454 CHN2P52757 468 aa8.82□□□□□ -1
SKA1-204ENST00000488454 WNT4P56705 351 aa8.82□□□□□ -1
SKA1-204ENST00000488454 TAS2R43P59537 309 aa8.82□□□□□ -1
SKA1-204ENST00000488454 ZNF92Q03936 586 aa8.82□□□□□ -1
SKA1-204ENST00000488454 MFGE8Q08431 387 aaPredicted RBP8.82□□□□□ -1
SKA1-204ENST00000488454 PSG7Q13046 419 aa8.82□□□□□ -1
SKA1-204ENST00000488454 ALKBH1Q13686 389 aaKnown RBP8.82□□□□□ -1
SKA1-204ENST00000488454 ZMAT1Q5H9K5 638 aa8.82□□□□□ -1
SKA1-204ENST00000488454 OR2T2Q6IF00 324 aa8.82□□□□□ -1
SKA1-204ENST00000488454 FDX2Q6P4F2 183 aa8.82□□□□□ -1
SKA1-204ENST00000488454 SHISA2Q6UWI4 295 aa8.82□□□□□ -1
SKA1-204ENST00000488454 DTX2Q86UW9 622 aa8.82□□□□□ -1
SKA1-204ENST00000488454 LRP11Q86VZ4 500 aa8.82□□□□□ -1
SKA1-204ENST00000488454 CATSPERDQ86XM0 798 aa8.82□□□□□ -1
SKA1-204ENST00000488454 ELMOD2Q8IZ81 293 aa8.82□□□□□ -1
SKA1-204ENST00000488454 ZNF676Q8N7Q3 588 aa8.82□□□□□ -1
SKA1-204ENST00000488454 OR2G2Q8NGZ5 317 aa8.82□□□□□ -1
SKA1-204ENST00000488454 OR2AE1Q8NHA4 323 aa8.82□□□□□ -1
SKA1-204ENST00000488454 OR51E1Q8TCB6 317 aa8.82□□□□□ -1
SKA1-204ENST00000488454 ITFG2Q969R8 447 aa8.82□□□□□ -1
SKA1-204ENST00000488454 PPP1R14AQ96A00 147 aa8.82□□□□□ -1
SKA1-204ENST00000488454 COMMD4Q9H0A8 199 aa8.82□□□□□ -1
SKA1-204ENST00000488454 MS4A5Q9H3V2 200 aa8.82□□□□□ -1
SKA1-204ENST00000488454 POFUT1Q9H488 388 aa8.82□□□□□ -1
SKA1-204ENST00000488454 HEATR1Q9H583 2144 aaKnown RBP8.82□□□□□ -1
SKA1-204ENST00000488454 CXorf56Q9H5V9 222 aa8.82□□□□□ -1
SKA1-204ENST00000488454 TRIM36Q9NQ86 728 aa8.82□□□□□ -1
SKA1-204ENST00000488454 PAK1IP1Q9NWT1 392 aaPredicted RBP8.82□□□□□ -1
SKA1-204ENST00000488454 ZNF319Q9P2F9 582 aa8.82□□□□□ -1
SKA1-204ENST00000488454 CGGBP1Q9UFW8 167 aaPredicted RBP8.82□□□□□ -1
SKA1-204ENST00000488454 PURGQ9UJV8 347 aaKnown RBP8.82□□□□□ -1
SKA1-204ENST00000488454 SLC22A13Q9Y226 551 aa8.82□□□□□ -1
SKA1-204ENST00000488454 UTP20O75691 2785 aaKnown RBP8.82□□□□□ -1
SKA1-204ENST00000488454 IGLV3-9A0A075B6K5 115 aa8.81□□□□□ -1
SKA1-204ENST00000488454 A0A1B0GVI7 797 aa8.81□□□□□ -1
SKA1-204ENST00000488454 ANKRD30BLA7E2S9 258 aa8.81□□□□□ -1
SKA1-204ENST00000488454 CD300LBA8K4G0 201 aa8.81□□□□□ -1
SKA1-204ENST00000488454 M0R233 179 aa8.81□□□□□ -1
SKA1-204ENST00000488454 SRSF10O75494 262 aaKnown RBP8.81□□□□□ -1
SKA1-204ENST00000488454 TNFAIP8O95379 198 aa8.81□□□□□ -1
SKA1-204ENST00000488454 TTRP02766 147 aa8.81□□□□□ -1
SKA1-204ENST00000488454 MT-ND2P03891 347 aa8.81□□□□□ -1
SKA1-204ENST00000488454 RAF1P04049 648 aa8.81□□□□□ -1
SKA1-204ENST00000488454 ADRA2AP08913 450 aa8.81□□□□□ -1
SKA1-204ENST00000488454 UBCP0CG48 685 aaKnown RBP8.81□□□□□ -1
SKA1-204ENST00000488454 ATP6V1B1P15313 513 aa8.81□□□□□ -1
SKA1-204ENST00000488454 ZNF12P17014 697 aa8.81□□□□□ -1
SKA1-204ENST00000488454 KITLGP21583 273 aa8.81□□□□□ -1
SKA1-204ENST00000488454 ALDH3B1P43353 468 aa8.81□□□□□ -1
SKA1-204ENST00000488454 CCR9P51686 369 aa8.81□□□□□ -1
SKA1-204ENST00000488454 KRTAP10-9P60411 292 aa8.81□□□□□ -1
SKA1-204ENST00000488454 FAM3AP98173 230 aa8.81□□□□□ -1
SKA1-204ENST00000488454 SPHARQ15513 63 aa8.81□□□□□ -1
SKA1-204ENST00000488454 MED22Q15528 200 aa8.81□□□□□ -1
SKA1-204ENST00000488454 MSMPQ1L6U9 139 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms