RNA–Protein interactions for RNA: ENST00000487645.1

COL4A6-207, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 3

Gene COL4A6, Length 812 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-207ENST00000487645 PAX1P15863 534 aa11.39□□□□□ -0.59
COL4A6-207ENST00000487645 DDOSTP39656 456 aa11.39□□□□□ -0.59
COL4A6-207ENST00000487645 PPOXP50336 477 aa11.39□□□□□ -0.59
COL4A6-207ENST00000487645 CCR9P51686 369 aa11.39□□□□□ -0.59
COL4A6-207ENST00000487645 MFGE8Q08431 387 aaPredicted RBP11.39□□□□□ -0.59
COL4A6-207ENST00000487645 CCDC58Q4VC31 144 aa11.39□□□□□ -0.59
COL4A6-207ENST00000487645 BCL2L15Q5TBC7 163 aa11.39□□□□□ -0.59
COL4A6-207ENST00000487645 MRPL21Q7Z2W9 205 aaKnown RBP11.39□□□□□ -0.59
COL4A6-207ENST00000487645 NANOGP1Q8N7R0 232 aa11.39□□□□□ -0.59
COL4A6-207ENST00000487645 OR2G2Q8NGZ5 317 aa11.39□□□□□ -0.59
COL4A6-207ENST00000487645 OR2AE1Q8NHA4 323 aa11.39□□□□□ -0.59
COL4A6-207ENST00000487645 MBD6Q96DN6 1003 aa11.39□□□□□ -0.59
COL4A6-207ENST00000487645 REEP6Q96HR9 211 aa11.39□□□□□ -0.59
COL4A6-207ENST00000487645 ACOXLQ9NUZ1 547 aa11.39□□□□□ -0.59
COL4A6-207ENST00000487645 BABAM2Q9NXR7 383 aa11.39□□□□□ -0.59
COL4A6-207ENST00000487645 ERVK-18Q9QC07 812 aa11.39□□□□□ -0.59
COL4A6-207ENST00000487645 CLEC2DQ9UHP7 191 aa11.39□□□□□ -0.59
COL4A6-207ENST00000487645 ERGIC3Q9Y282 383 aa11.39□□□□□ -0.59
COL4A6-207ENST00000487645 USF3Q68DE3 2245 aa11.39□□□□□ -0.59
COL4A6-207ENST00000487645 A0A1W2PPW3 197 aa11.38□□□□□ -0.59
COL4A6-207ENST00000487645 PLSCR5A0PG75 271 aa11.38□□□□□ -0.59
COL4A6-207ENST00000487645 H7C417 338 aa11.38□□□□□ -0.59
COL4A6-207ENST00000487645 M0R233 179 aa11.38□□□□□ -0.59
COL4A6-207ENST00000487645 RGS10O43665 173 aa11.38□□□□□ -0.59
COL4A6-207ENST00000487645 TIMM8AO60220 97 aaPredicted RBP11.38□□□□□ -0.59
COL4A6-207ENST00000487645 IGLV3-1P01715 115 aa11.38□□□□□ -0.59
COL4A6-207ENST00000487645 TTRP02766 147 aa11.38□□□□□ -0.59
COL4A6-207ENST00000487645 HTR1AP08908 422 aa11.38□□□□□ -0.59
COL4A6-207ENST00000487645 ATP6V1B1P15313 513 aa11.38□□□□□ -0.59
COL4A6-207ENST00000487645 ANOS1P23352 680 aa11.38□□□□□ -0.59
COL4A6-207ENST00000487645 PSMB10P40306 273 aa11.38□□□□□ -0.59
COL4A6-207ENST00000487645 TGM4P49221 684 aa11.38□□□□□ -0.59
COL4A6-207ENST00000487645 MMP15P51511 669 aa11.38□□□□□ -0.59
COL4A6-207ENST00000487645 GABARAPL2P60520 117 aa11.38□□□□□ -0.59
COL4A6-207ENST00000487645 FAM3AP98173 230 aa11.38□□□□□ -0.59
COL4A6-207ENST00000487645 NKPD1Q17RQ9 610 aa11.38□□□□□ -0.59
COL4A6-207ENST00000487645 TMEM255AQ5JRV8 349 aa11.38□□□□□ -0.59
COL4A6-207ENST00000487645 PRSS48Q7RTY5 328 aa11.38□□□□□ -0.59
COL4A6-207ENST00000487645 ZNF485Q8NCK3 441 aa11.38□□□□□ -0.59
COL4A6-207ENST00000487645 CCDC54Q8NEL0 328 aa11.38□□□□□ -0.59
COL4A6-207ENST00000487645 OR8G5Q8NG78 346 aa11.38□□□□□ -0.59
COL4A6-207ENST00000487645 SPRYD4Q8WW59 207 aaPredicted RBP11.38□□□□□ -0.59
COL4A6-207ENST00000487645 PPP1R14AQ96A00 147 aa11.38□□□□□ -0.59
COL4A6-207ENST00000487645 LYZL4Q96KX0 146 aa11.38□□□□□ -0.59
COL4A6-207ENST00000487645 CACNG6Q9BXT2 260 aa11.38□□□□□ -0.59
COL4A6-207ENST00000487645 ZNF701Q9NV72 531 aaPredicted RBP11.38□□□□□ -0.59
COL4A6-207ENST00000487645 BEX4Q9NWD9 120 aaPredicted RBP11.38□□□□□ -0.59
COL4A6-207ENST00000487645 FRRS1LQ9P0K9 344 aa11.38□□□□□ -0.59
COL4A6-207ENST00000487645 ZDHHC8Q9ULC8 765 aa11.38□□□□□ -0.59
COL4A6-207ENST00000487645 GTF2A1LQ9UNN4 478 aa11.38□□□□□ -0.59
COL4A6-207ENST00000487645 PLEKHA6Q9Y2H5 1048 aa11.38□□□□□ -0.59
COL4A6-207ENST00000487645 POLQO75417 2590 aa11.38□□□□□ -0.59
COL4A6-207ENST00000487645 LOC390937A0A1W2PQ73 354 aa11.37□□□□□ -0.59
COL4A6-207ENST00000487645 GGT3PA6NGU5 568 aa11.37□□□□□ -0.59
COL4A6-207ENST00000487645 CD300LBA8K4G0 201 aa11.37□□□□□ -0.59
COL4A6-207ENST00000487645 MTRF1O75570 445 aaKnown RBP11.37□□□□□ -0.59
COL4A6-207ENST00000487645 ISG15P05161 165 aa11.37□□□□□ -0.59
COL4A6-207ENST00000487645 EEF1B2P24534 225 aaKnown RBP11.37□□□□□ -0.59
COL4A6-207ENST00000487645 MAP2K3P46734 347 aa11.37□□□□□ -0.59
COL4A6-207ENST00000487645 GSK3AP49840 483 aa11.37□□□□□ -0.59
COL4A6-207ENST00000487645 WNT4P56705 351 aa11.37□□□□□ -0.59
COL4A6-207ENST00000487645 ALKBH1Q13686 389 aaKnown RBP11.37□□□□□ -0.59
COL4A6-207ENST00000487645 IRF3Q14653 427 aa11.37□□□□□ -0.59
COL4A6-207ENST00000487645 ZMAT1Q5H9K5 638 aa11.37□□□□□ -0.59
COL4A6-207ENST00000487645 WDR38Q5JTN6 314 aa11.37□□□□□ -0.59
COL4A6-207ENST00000487645 OR2G6Q5TZ20 316 aa11.37□□□□□ -0.59
COL4A6-207ENST00000487645 OR2T2Q6IF00 324 aa11.37□□□□□ -0.59
COL4A6-207ENST00000487645 Q6ZSR3 168 aa11.37□□□□□ -0.59
COL4A6-207ENST00000487645 CDH24Q86UP0 819 aa11.37□□□□□ -0.59
COL4A6-207ENST00000487645 PRSS35Q8N3Z0 413 aa11.37□□□□□ -0.59
COL4A6-207ENST00000487645 PLPP7Q8NBV4 271 aa11.37□□□□□ -0.59
COL4A6-207ENST00000487645 CSNK2A3Q8NEV1 391 aa11.37□□□□□ -0.59
COL4A6-207ENST00000487645 OR51E1Q8TCB6 317 aa11.37□□□□□ -0.59
COL4A6-207ENST00000487645 GATAD2BQ8WXI9 593 aa11.37□□□□□ -0.59
COL4A6-207ENST00000487645 SGCDQ92629 289 aa11.37□□□□□ -0.59
COL4A6-207ENST00000487645 TRMT61AQ96FX7 289 aaKnown RBP11.37□□□□□ -0.59
COL4A6-207ENST00000487645 DIRC2Q96SL1 478 aa11.37□□□□□ -0.59
COL4A6-207ENST00000487645 MND1Q9BWT6 205 aa11.37□□□□□ -0.59
COL4A6-207ENST00000487645 SLC22A4Q9H015 551 aa11.37□□□□□ -0.59
COL4A6-207ENST00000487645 RAB1BQ9H0U4 201 aa11.37□□□□□ -0.59
COL4A6-207ENST00000487645 DYNLRB1Q9NP97 96 aa11.37□□□□□ -0.59
COL4A6-207ENST00000487645 NKIRAS2Q9NYR9 191 aa11.37□□□□□ -0.59
COL4A6-207ENST00000487645 SLC22A13Q9Y226 551 aa11.37□□□□□ -0.59
COL4A6-207ENST00000487645 A0A1B0GTI1 187 aa11.36□□□□□ -0.59
COL4A6-207ENST00000487645 hCG_38984A0A1B0GV85 526 aa11.36□□□□□ -0.59
COL4A6-207ENST00000487645 A0A1B0GWJ7 208 aa11.36□□□□□ -0.59
COL4A6-207ENST00000487645 C17orf100A8MU93 164 aa11.36□□□□□ -0.59
COL4A6-207ENST00000487645 E9PI62 339 aa11.36□□□□□ -0.59
COL4A6-207ENST00000487645 MYL12BO14950 172 aa11.36□□□□□ -0.59
COL4A6-207ENST00000487645 OGG1O15527 345 aa11.36□□□□□ -0.59
COL4A6-207ENST00000487645 ERCC1P07992 297 aaPredicted RBP11.36□□□□□ -0.59
COL4A6-207ENST00000487645 ADH4P08319 380 aa11.36□□□□□ -0.59
COL4A6-207ENST00000487645 UBCP0CG48 685 aaKnown RBP11.36□□□□□ -0.59
COL4A6-207ENST00000487645 ZNF12P17014 697 aa11.36□□□□□ -0.59
COL4A6-207ENST00000487645 ALDH3B1P43353 468 aa11.36□□□□□ -0.59
COL4A6-207ENST00000487645 ZNF81P51508 661 aa11.36□□□□□ -0.59
COL4A6-207ENST00000487645 NANOS3P60323 173 aaKnown RBP11.36□□□□□ -0.59
COL4A6-207ENST00000487645 OR8B8Q15620 311 aa11.36□□□□□ -0.59
COL4A6-207ENST00000487645 DEFB113Q30KQ7 82 aa11.36□□□□□ -0.59
COL4A6-207ENST00000487645 PCGF3Q3KNV8 242 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms