RNA–Protein interactions for RNA: ENST00000487354.1

MCF2L-228, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-228ENST00000487354 GMDSO60547 372 aa12.54□□□□□ -0.4
MCF2L-228ENST00000487354 LCATP04180 440 aa12.54□□□□□ -0.4
MCF2L-228ENST00000487354 IFNW1P05000 195 aa12.54□□□□□ -0.4
MCF2L-228ENST00000487354 SAA4P35542 130 aa12.54□□□□□ -0.4
MCF2L-228ENST00000487354 MDH1P40925 334 aaKnown RBP12.54□□□□□ -0.4
MCF2L-228ENST00000487354 OMPP47874 163 aa12.54□□□□□ -0.4
MCF2L-228ENST00000487354 PCK2Q16822 640 aa12.54□□□□□ -0.4
MCF2L-228ENST00000487354 WDR38Q5JTN6 314 aa12.54□□□□□ -0.4
MCF2L-228ENST00000487354 PGM2L1Q6PCE3 622 aa12.54□□□□□ -0.4
MCF2L-228ENST00000487354 MRPL21Q7Z2W9 205 aaKnown RBP12.54□□□□□ -0.4
MCF2L-228ENST00000487354 KLHDC1Q8N7A1 406 aa12.54□□□□□ -0.4
MCF2L-228ENST00000487354 OR5R1Q8NH85 324 aa12.54□□□□□ -0.4
MCF2L-228ENST00000487354 PPP1R14AQ96A00 147 aa12.54□□□□□ -0.4
MCF2L-228ENST00000487354 SEH1LQ96EE3 360 aa12.54□□□□□ -0.4
MCF2L-228ENST00000487354 MAP6Q96JE9 813 aa12.54□□□□□ -0.4
MCF2L-228ENST00000487354 CCL13Q99616 98 aa12.54□□□□□ -0.4
MCF2L-228ENST00000487354 SH3GL1Q99961 368 aa12.54□□□□□ -0.4
MCF2L-228ENST00000487354 SLC22A4Q9H015 551 aa12.54□□□□□ -0.4
MCF2L-228ENST00000487354 NECAP2Q9NVZ3 263 aa12.54□□□□□ -0.4
MCF2L-228ENST00000487354 DNAJB11Q9UBS4 358 aa12.54□□□□□ -0.4
MCF2L-228ENST00000487354 CYB5R1Q9UHQ9 305 aa12.54□□□□□ -0.4
MCF2L-228ENST00000487354 BTBD17A6NE02 478 aa12.53□□□□□ -0.4
MCF2L-228ENST00000487354 ADARB2-AS1A8MUL3 147 aa12.53□□□□□ -0.4
MCF2L-228ENST00000487354 SELLP14151 372 aa12.53□□□□□ -0.4
MCF2L-228ENST00000487354 OTX1P32242 354 aaPredicted RBP12.53□□□□□ -0.4
MCF2L-228ENST00000487354 COQ5Q5HYK3 327 aa12.53□□□□□ -0.4
MCF2L-228ENST00000487354 GLYATL3Q5SZD4 288 aa12.53□□□□□ -0.4
MCF2L-228ENST00000487354 HCP5Q6MZN7 132 aa12.53□□□□□ -0.4
MCF2L-228ENST00000487354 LYG1Q8N1E2 194 aa12.53□□□□□ -0.4
MCF2L-228ENST00000487354 C8orf46Q8TAG6 207 aa12.53□□□□□ -0.4
MCF2L-228ENST00000487354 PHF21AQ96BD5 680 aa12.53□□□□□ -0.4
MCF2L-228ENST00000487354 RSRC1Q96IZ7 334 aaKnown RBP12.53□□□□□ -0.4
MCF2L-228ENST00000487354 PITX2Q99697 317 aa12.53□□□□□ -0.4
MCF2L-228ENST00000487354 MRPL22Q9NWU5 206 aaKnown RBP12.53□□□□□ -0.4
MCF2L-228ENST00000487354 MRPL15Q9P015 296 aaKnown RBP12.53□□□□□ -0.4
MCF2L-228ENST00000487354 ANKRD61A6NGH8 418 aa12.52□□□□□ -0.41
MCF2L-228ENST00000487354 H3BUX3 64 aa12.52□□□□□ -0.41
MCF2L-228ENST00000487354 M0R135 149 aa12.52□□□□□ -0.41
MCF2L-228ENST00000487354 ACOT8O14734 319 aa12.52□□□□□ -0.41
MCF2L-228ENST00000487354 GRPP07492 148 aa12.52□□□□□ -0.41
MCF2L-228ENST00000487354 IFNA8P32881 189 aa12.52□□□□□ -0.41
MCF2L-228ENST00000487354 KIR2DS4P43632 304 aa12.52□□□□□ -0.41
MCF2L-228ENST00000487354 GUCA2AQ02747 115 aa12.52□□□□□ -0.41
MCF2L-228ENST00000487354 ECH1Q13011 328 aa12.52□□□□□ -0.41
MCF2L-228ENST00000487354 MALLQ13021 153 aa12.52□□□□□ -0.41
MCF2L-228ENST00000487354 VAX1Q5SQQ9 334 aa12.52□□□□□ -0.41
MCF2L-228ENST00000487354 AGBL2Q5U5Z8 902 aa12.52□□□□□ -0.41
MCF2L-228ENST00000487354 C11orf87Q6NUJ2 197 aa12.52□□□□□ -0.41
MCF2L-228ENST00000487354 DPY19L2P2Q6ZN68 376 aa12.52□□□□□ -0.41
MCF2L-228ENST00000487354 ZBTB46Q86UZ6 589 aa12.52□□□□□ -0.41
MCF2L-228ENST00000487354 BEND2Q8NDZ0 799 aa12.52□□□□□ -0.41
MCF2L-228ENST00000487354 OR2T12Q8NG77 320 aa12.52□□□□□ -0.41
MCF2L-228ENST00000487354 ZNF799Q96GE5 643 aa12.52□□□□□ -0.41
MCF2L-228ENST00000487354 DMRTB1Q96MA1 342 aa12.52□□□□□ -0.41
MCF2L-228ENST00000487354 DCTN5Q9BTE1 182 aa12.52□□□□□ -0.41
MCF2L-228ENST00000487354 ANKRD19PQ9H560 264 aa12.52□□□□□ -0.41
MCF2L-228ENST00000487354 PRPF19Q9UMS4 504 aaKnown RBP12.52□□□□□ -0.41
MCF2L-228ENST00000487354 TMEM5Q9Y2B1 443 aa12.52□□□□□ -0.41
MCF2L-228ENST00000487354 CAB39Q9Y376 341 aaPredicted RBP12.52□□□□□ -0.41
MCF2L-228ENST00000487354 MEIOCA2RUB1 952 aa12.51□□□□□ -0.41
MCF2L-228ENST00000487354 A6NLC8 198 aa12.51□□□□□ -0.41
MCF2L-228ENST00000487354 MRASO14807 208 aa12.51□□□□□ -0.41
MCF2L-228ENST00000487354 CHST1O43916 411 aa12.51□□□□□ -0.41
MCF2L-228ENST00000487354 CRABP1P29762 137 aa12.51□□□□□ -0.41
MCF2L-228ENST00000487354 TGM4P49221 684 aa12.51□□□□□ -0.41
MCF2L-228ENST00000487354 CENPAP49450 140 aa12.51□□□□□ -0.41
MCF2L-228ENST00000487354 CSNK2BP67870 215 aa12.51□□□□□ -0.41
MCF2L-228ENST00000487354 SEC23BQ15437 767 aa12.51□□□□□ -0.41
MCF2L-228ENST00000487354 RFX4Q33E94 735 aa12.51□□□□□ -0.41
MCF2L-228ENST00000487354 OR56B2PQ8NGI1 322 aa12.51□□□□□ -0.41
MCF2L-228ENST00000487354 WIPF2Q8TF74 440 aaPredicted RBP12.51□□□□□ -0.41
MCF2L-228ENST00000487354 LRRC29Q8WV35 223 aa12.51□□□□□ -0.41
MCF2L-228ENST00000487354 RORBQ92753 470 aa12.51□□□□□ -0.41
MCF2L-228ENST00000487354 NMNAT3Q96T66 252 aa12.51□□□□□ -0.41
MCF2L-228ENST00000487354 MMP28Q9H239 520 aa12.51□□□□□ -0.41
MCF2L-228ENST00000487354 FN3KQ9H479 309 aa12.51□□□□□ -0.41
MCF2L-228ENST00000487354 PPP1R3EQ9H7J1 279 aa12.51□□□□□ -0.41
MCF2L-228ENST00000487354 SRA1Q9HD15 236 aaKnown RBP12.51□□□□□ -0.41
MCF2L-228ENST00000487354 CMTM6Q9NX76 183 aa12.51□□□□□ -0.41
MCF2L-228ENST00000487354 NOP16Q9Y3C1 178 aaKnown RBP12.51□□□□□ -0.41
MCF2L-228ENST00000487354 MAB21L2Q9Y586 359 aa12.51□□□□□ -0.41
MCF2L-228ENST00000487354 hCG_1807616A0A1W2PRN6 198 aa12.5□□□□□ -0.41
MCF2L-228ENST00000487354 NPPAP01160 153 aa12.5□□□□□ -0.41
MCF2L-228ENST00000487354 TFF1P04155 84 aa12.5□□□□□ -0.41
MCF2L-228ENST00000487354 VSIG8P0DPA2 414 aa12.5□□□□□ -0.41
MCF2L-228ENST00000487354 MUC1P15941 1255 aaPredicted RBP12.5□□□□□ -0.41
MCF2L-228ENST00000487354 PAX6P26367 422 aa12.5□□□□□ -0.41
MCF2L-228ENST00000487354 RPS27P42677 84 aaKnown RBP12.5□□□□□ -0.41
MCF2L-228ENST00000487354 UBE2E1P51965 193 aa12.5□□□□□ -0.41
MCF2L-228ENST00000487354 IFI44LQ53G44 452 aa12.5□□□□□ -0.41
MCF2L-228ENST00000487354 STUMQ69YW2 141 aa12.5□□□□□ -0.41
MCF2L-228ENST00000487354 DNM1P34Q6PK57 102 aa12.5□□□□□ -0.41
MCF2L-228ENST00000487354 WDR82Q6UXN9 313 aa12.5□□□□□ -0.41
MCF2L-228ENST00000487354 CBLL1Q75N03 491 aa12.5□□□□□ -0.41
MCF2L-228ENST00000487354 LZICQ8WZA0 190 aa12.5□□□□□ -0.41
MCF2L-228ENST00000487354 HSH2DQ96JZ2 352 aa12.5□□□□□ -0.41
MCF2L-228ENST00000487354 FUZQ9BT04 418 aa12.5□□□□□ -0.41
MCF2L-228ENST00000487354 NDEL1Q9GZM8 345 aa12.5□□□□□ -0.41
MCF2L-228ENST00000487354 AURKCQ9UQB9 309 aa12.5□□□□□ -0.41
MCF2L-228ENST00000487354 TRBV4-1A0A0J9YWV2 114 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms