RNA–Protein interactions for RNA: ENST00000483656.5

HDAC6-226, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-226ENST00000483656 JKAMPQ9P055 326 aa8.75□□□□□ -1.01
HDAC6-226ENST00000483656 CRNNQ9UBG3 495 aaPredicted RBP8.75□□□□□ -1.01
HDAC6-226ENST00000483656 ZNF629Q9UEG4 869 aaPredicted RBP8.75□□□□□ -1.01
HDAC6-226ENST00000483656 MEMO1Q9Y316 297 aa8.75□□□□□ -1.01
HDAC6-226ENST00000483656 PEX16Q9Y5Y5 336 aa8.75□□□□□ -1.01
HDAC6-226ENST00000483656 TRGV8A0A0C4DH27 118 aa8.74□□□□□ -1.01
HDAC6-226ENST00000483656 LOC390937A0A1W2PQ73 354 aa8.74□□□□□ -1.01
HDAC6-226ENST00000483656 OR5H1A6NKK0 313 aa8.74□□□□□ -1.01
HDAC6-226ENST00000483656 IFITM5A6NNB3 132 aa8.74□□□□□ -1.01
HDAC6-226ENST00000483656 PAHP00439 452 aa8.74□□□□□ -1.01
HDAC6-226ENST00000483656 NGFP01138 241 aa8.74□□□□□ -1.01
HDAC6-226ENST00000483656 PSMB1P20618 241 aaKnown RBP8.74□□□□□ -1.01
HDAC6-226ENST00000483656 BMP5P22003 454 aa8.74□□□□□ -1.01
HDAC6-226ENST00000483656 ACKR3P25106 362 aa8.74□□□□□ -1.01
HDAC6-226ENST00000483656 PEX19P40855 299 aa8.74□□□□□ -1.01
HDAC6-226ENST00000483656 ZNF92Q03936 586 aa8.74□□□□□ -1.01
HDAC6-226ENST00000483656 HES5Q5TA89 166 aa8.74□□□□□ -1.01
HDAC6-226ENST00000483656 FAM166AQ6J272 317 aa8.74□□□□□ -1.01
HDAC6-226ENST00000483656 RNF144BQ7Z419 303 aa8.74□□□□□ -1.01
HDAC6-226ENST00000483656 COMMD2Q86X83 199 aa8.74□□□□□ -1.01
HDAC6-226ENST00000483656 CROCCP3Q8IVE0 287 aa8.74□□□□□ -1.01
HDAC6-226ENST00000483656 LAX1Q8IWV1 398 aa8.74□□□□□ -1.01
HDAC6-226ENST00000483656 OR5AS1Q8N127 324 aa8.74□□□□□ -1.01
HDAC6-226ENST00000483656 C17orf78Q8N4C9 275 aa8.74□□□□□ -1.01
HDAC6-226ENST00000483656 SLC30A7Q8NEW0 376 aa8.74□□□□□ -1.01
HDAC6-226ENST00000483656 OR5H6Q8NGV6 325 aa8.74□□□□□ -1.01
HDAC6-226ENST00000483656 ZFAND2BQ8WV99 257 aa8.74□□□□□ -1.01
HDAC6-226ENST00000483656 KCTD12Q96CX2 325 aaKnown RBP8.74□□□□□ -1.01
HDAC6-226ENST00000483656 REEP6Q96HR9 211 aa8.74□□□□□ -1.01
HDAC6-226ENST00000483656 WDFY2Q96P53 400 aa8.74□□□□□ -1.01
HDAC6-226ENST00000483656 C1QTNF6Q9BXI9 259 aa8.74□□□□□ -1.01
HDAC6-226ENST00000483656 SLITRK2Q9H156 845 aa8.74□□□□□ -1.01
HDAC6-226ENST00000483656 SP140LQ9H930 580 aa8.74□□□□□ -1.01
HDAC6-226ENST00000483656 COMMD3Q9UBI1 195 aa8.74□□□□□ -1.01
HDAC6-226ENST00000483656 DAPK2Q9UIK4 370 aa8.74□□□□□ -1.01
HDAC6-226ENST00000483656 STARD10Q9Y365 291 aa8.74□□□□□ -1.01
HDAC6-226ENST00000483656 RHBDD3Q9Y3P4 386 aa8.74□□□□□ -1.01
HDAC6-226ENST00000483656 CMAHPQ9Y471 501 aa8.74□□□□□ -1.01
HDAC6-226ENST00000483656 SLC25A15Q9Y619 301 aa8.74□□□□□ -1.01
HDAC6-226ENST00000483656 V9GY05 133 aa8.74□□□□□ -1.01
HDAC6-226ENST00000483656 POLEQ07864 2286 aa8.74□□□□□ -1.01
HDAC6-226ENST00000483656 USP9XQ93008 2570 aaPredicted RBP8.73□□□□□ -1.01
HDAC6-226ENST00000483656 IGKV1-9A0A0C4DH69 117 aa8.73□□□□□ -1.01
HDAC6-226ENST00000483656 hCG_38984A0A1B0GV85 526 aa8.73□□□□□ -1.01
HDAC6-226ENST00000483656 CYSRT1A8MQ03 144 aa8.73□□□□□ -1.01
HDAC6-226ENST00000483656 CLDN25C9JDP6 229 aa8.73□□□□□ -1.01
HDAC6-226ENST00000483656 J3QRK9 145 aa8.73□□□□□ -1.01
HDAC6-226ENST00000483656 AIPO00170 330 aa8.73□□□□□ -1.01
HDAC6-226ENST00000483656 HPGDSO60760 199 aa8.73□□□□□ -1.01
HDAC6-226ENST00000483656 DHRS3O75911 302 aa8.73□□□□□ -1.01
HDAC6-226ENST00000483656 IGKV3-15P01624 115 aa8.73□□□□□ -1.01
HDAC6-226ENST00000483656 IGLV1-44P01699 117 aa8.73□□□□□ -1.01
HDAC6-226ENST00000483656 SNRPBP14678 240 aaKnown RBP8.73□□□□□ -1.01
HDAC6-226ENST00000483656 ZNF12P17014 697 aa8.73□□□□□ -1.01
HDAC6-226ENST00000483656 CCNOP22674 350 aa8.73□□□□□ -1.01
HDAC6-226ENST00000483656 CFL1P23528 166 aaKnown RBP8.73□□□□□ -1.01
HDAC6-226ENST00000483656 CFPP27918 469 aa8.73□□□□□ -1.01
HDAC6-226ENST00000483656 APLNRP35414 380 aa8.73□□□□□ -1.01
HDAC6-226ENST00000483656 ETV6P41212 452 aa8.73□□□□□ -1.01
HDAC6-226ENST00000483656 GSK3AP49840 483 aa8.73□□□□□ -1.01
HDAC6-226ENST00000483656 IDH3GP51553 393 aaPredicted RBP8.73□□□□□ -1.01
HDAC6-226ENST00000483656 PRSS12P56730 875 aa8.73□□□□□ -1.01
HDAC6-226ENST00000483656 FAM3AP98173 230 aa8.73□□□□□ -1.01
HDAC6-226ENST00000483656 SPOCK1Q08629 439 aa8.73□□□□□ -1.01
HDAC6-226ENST00000483656 FAM27E3Q08E93 113 aa8.73□□□□□ -1.01
HDAC6-226ENST00000483656 MRPL49Q13405 166 aaKnown RBP8.73□□□□□ -1.01
HDAC6-226ENST00000483656 DYNC1I2Q13409 638 aaKnown RBP8.73□□□□□ -1.01
HDAC6-226ENST00000483656 TMEM211Q6ICI0 200 aa8.73□□□□□ -1.01
HDAC6-226ENST00000483656 C22orf34Q6ZV56 151 aa8.73□□□□□ -1.01
HDAC6-226ENST00000483656 MRGPRGQ86SM5 289 aa8.73□□□□□ -1.01
HDAC6-226ENST00000483656 SERPINA12Q8IW75 414 aa8.73□□□□□ -1.01
HDAC6-226ENST00000483656 ZNF101Q8IZC7 436 aa8.73□□□□□ -1.01
HDAC6-226ENST00000483656 CCDC54Q8NEL0 328 aa8.73□□□□□ -1.01
HDAC6-226ENST00000483656 OR1M1Q8NGA1 313 aa8.73□□□□□ -1.01
HDAC6-226ENST00000483656 ACOT12Q8WYK0 555 aa8.73□□□□□ -1.01
HDAC6-226ENST00000483656 AP3S1Q92572 193 aa8.73□□□□□ -1.01
HDAC6-226ENST00000483656 SLC25A28Q96A46 364 aa8.73□□□□□ -1.01
HDAC6-226ENST00000483656 S100PBPQ96BU1 408 aa8.73□□□□□ -1.01
HDAC6-226ENST00000483656 NKX3-1Q99801 234 aaPredicted RBP8.73□□□□□ -1.01
HDAC6-226ENST00000483656 OBP2BQ9NPH6 170 aa8.73□□□□□ -1.01
HDAC6-226ENST00000483656 OSGIN2Q9Y236 505 aa8.73□□□□□ -1.01
HDAC6-226ENST00000483656 IGSF10Q6WRI0 2623 aa8.73□□□□□ -1.01
HDAC6-226ENST00000483656 MEGF11A6BM72 1044 aa8.72□□□□□ -1.01
HDAC6-226ENST00000483656 ANXA2P2A6NMY6 339 aa8.72□□□□□ -1.01
HDAC6-226ENST00000483656 EEF1E1-BLOC1S5C9J1V9 151 aa8.72□□□□□ -1.01
HDAC6-226ENST00000483656 EEF1E1O43324 174 aaKnown RBP8.72□□□□□ -1.01
HDAC6-226ENST00000483656 XRCC2O43543 280 aa8.72□□□□□ -1.01
HDAC6-226ENST00000483656 ICMTO60725 284 aa8.72□□□□□ -1.01
HDAC6-226ENST00000483656 FAHP16930 419 aa8.72□□□□□ -1.01
HDAC6-226ENST00000483656 ZNF20P17024 532 aa8.72□□□□□ -1.01
HDAC6-226ENST00000483656 IL32P24001 234 aa8.72□□□□□ -1.01
HDAC6-226ENST00000483656 BDKRB2P30411 391 aa8.72□□□□□ -1.01
HDAC6-226ENST00000483656 CCKARP32238 428 aa8.72□□□□□ -1.01
HDAC6-226ENST00000483656 S100A5P33763 92 aa8.72□□□□□ -1.01
HDAC6-226ENST00000483656 THBS4P35443 961 aa8.72□□□□□ -1.01
HDAC6-226ENST00000483656 GNALP38405 381 aa8.72□□□□□ -1.01
HDAC6-226ENST00000483656 CLDN12P56749 244 aa8.72□□□□□ -1.01
HDAC6-226ENST00000483656 ZNF846Q147U1 533 aa8.72□□□□□ -1.01
HDAC6-226ENST00000483656 OR8B8Q15620 311 aa8.72□□□□□ -1.01
HDAC6-226ENST00000483656 TIMM23BQ5SRD1 257 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms