RNA–Protein interactions for RNA: ENST00000481929.5

HDAC6-224, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-224ENST00000481929 ACSM4P0C7M7 580 aa12.13□□□□□ -0.47
HDAC6-224ENST00000481929 CRYBA2P53672 197 aa12.13□□□□□ -0.47
HDAC6-224ENST00000481929 ELF3P78545 371 aaPredicted RBP12.13□□□□□ -0.47
HDAC6-224ENST00000481929 MZT1Q08AG7 82 aa12.13□□□□□ -0.47
HDAC6-224ENST00000481929 EGFEM1PQ0D2K5 195 aa12.13□□□□□ -0.47
HDAC6-224ENST00000481929 BLMHQ13867 455 aa12.13□□□□□ -0.47
HDAC6-224ENST00000481929 SELPLGQ14242 412 aa12.13□□□□□ -0.47
HDAC6-224ENST00000481929 KCNMB1Q16558 191 aa12.13□□□□□ -0.47
HDAC6-224ENST00000481929 RSPO1Q2MKA7 263 aaPredicted RBP12.13□□□□□ -0.47
HDAC6-224ENST00000481929 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.13□□□□□ -0.47
HDAC6-224ENST00000481929 DHDDSQ86SQ9 333 aa12.13□□□□□ -0.47
HDAC6-224ENST00000481929 Q8N2B8 174 aa12.13□□□□□ -0.47
HDAC6-224ENST00000481929 OR13C2Q8NGS9 318 aa12.13□□□□□ -0.47
HDAC6-224ENST00000481929 DPF1Q92782 380 aa12.13□□□□□ -0.47
HDAC6-224ENST00000481929 C14orf119Q9NWQ9 140 aa12.13□□□□□ -0.47
HDAC6-224ENST00000481929 NDUFAF1Q9Y375 327 aa12.13□□□□□ -0.47
HDAC6-224ENST00000481929 LHFPL6Q9Y693 200 aa12.13□□□□□ -0.47
HDAC6-224ENST00000481929 MEGF11A6BM72 1044 aa12.12□□□□□ -0.47
HDAC6-224ENST00000481929 EFCAB9A8MZ26 197 aa12.12□□□□□ -0.47
HDAC6-224ENST00000481929 CD14P08571 375 aa12.12□□□□□ -0.47
HDAC6-224ENST00000481929 PAICSP22234 425 aaKnown RBP12.12□□□□□ -0.47
HDAC6-224ENST00000481929 HOXD3P31249 432 aaPredicted RBP12.12□□□□□ -0.47
HDAC6-224ENST00000481929 SLC9A3P48764 834 aa12.12□□□□□ -0.47
HDAC6-224ENST00000481929 ST3GAL3Q11203 375 aa12.12□□□□□ -0.47
HDAC6-224ENST00000481929 FHL1Q13642 323 aa12.12□□□□□ -0.47
HDAC6-224ENST00000481929 ARSJQ5FYB0 599 aaPredicted RBP12.12□□□□□ -0.47
HDAC6-224ENST00000481929 PGM2L1Q6PCE3 622 aa12.12□□□□□ -0.47
HDAC6-224ENST00000481929 CORO6Q6QEF8 472 aa12.12□□□□□ -0.47
HDAC6-224ENST00000481929 LRRC29Q8WV35 223 aa12.12□□□□□ -0.47
HDAC6-224ENST00000481929 OR5M11Q96RB7 305 aa12.12□□□□□ -0.47
HDAC6-224ENST00000481929 NDEL1Q9GZM8 345 aa12.12□□□□□ -0.47
HDAC6-224ENST00000481929 WNT10AQ9GZT5 417 aa12.12□□□□□ -0.47
HDAC6-224ENST00000481929 A0A1W2PQ09 198 aa12.11□□□□□ -0.47
HDAC6-224ENST00000481929 GGT3PA6NGU5 568 aa12.11□□□□□ -0.47
HDAC6-224ENST00000481929 ACOT8O14734 319 aa12.11□□□□□ -0.47
HDAC6-224ENST00000481929 ANGPTL7O43827 346 aa12.11□□□□□ -0.47
HDAC6-224ENST00000481929 PAX6P26367 422 aa12.11□□□□□ -0.47
HDAC6-224ENST00000481929 GRK5P34947 590 aa12.11□□□□□ -0.47
HDAC6-224ENST00000481929 GGT2P36268 569 aa12.11□□□□□ -0.47
HDAC6-224ENST00000481929 OR1E2P47887 323 aa12.11□□□□□ -0.47
HDAC6-224ENST00000481929 CENPAP49450 140 aa12.11□□□□□ -0.47
HDAC6-224ENST00000481929 GSK3BP49841 420 aa12.11□□□□□ -0.47
HDAC6-224ENST00000481929 KRR1Q13601 381 aaKnown RBP12.11□□□□□ -0.47
HDAC6-224ENST00000481929 MEP1BQ16820 701 aa12.11□□□□□ -0.47
HDAC6-224ENST00000481929 KRTAP27-1Q3LI81 207 aa12.11□□□□□ -0.47
HDAC6-224ENST00000481929 AGKQ53H12 422 aa12.11□□□□□ -0.47
HDAC6-224ENST00000481929 EPGNQ6UW88 154 aa12.11□□□□□ -0.47
HDAC6-224ENST00000481929 CCDC80Q76M96 950 aa12.11□□□□□ -0.47
HDAC6-224ENST00000481929 FAM122BQ7Z309 247 aa12.11□□□□□ -0.47
HDAC6-224ENST00000481929 RNF144BQ7Z419 303 aa12.11□□□□□ -0.47
HDAC6-224ENST00000481929 NRMQ8IXM6 262 aa12.11□□□□□ -0.47
HDAC6-224ENST00000481929 FAM156AQ8NDB6 213 aa12.11□□□□□ -0.47
HDAC6-224ENST00000481929 AJUBAQ96IF1 538 aa12.11□□□□□ -0.47
HDAC6-224ENST00000481929 CGREF1Q99674 301 aa12.11□□□□□ -0.47
HDAC6-224ENST00000481929 PITX2Q99697 317 aa12.11□□□□□ -0.47
HDAC6-224ENST00000481929 GPR61Q9BZJ8 451 aa12.11□□□□□ -0.47
HDAC6-224ENST00000481929 PRSS22Q9GZN4 317 aa12.11□□□□□ -0.47
HDAC6-224ENST00000481929 KAT8Q9H7Z6 458 aaKnown RBP12.11□□□□□ -0.47
HDAC6-224ENST00000481929 RNPEPL1Q9HAU8 725 aa12.11□□□□□ -0.47
HDAC6-224ENST00000481929 MRPL15Q9P015 296 aaKnown RBP12.11□□□□□ -0.47
HDAC6-224ENST00000481929 CAPN7Q9Y6W3 813 aa12.11□□□□□ -0.47
HDAC6-224ENST00000481929 BHLHE40O14503 412 aa12.1□□□□□ -0.47
HDAC6-224ENST00000481929 IFNA8P32881 189 aa12.1□□□□□ -0.47
HDAC6-224ENST00000481929 WDR4P57081 412 aaKnown RBP12.1□□□□□ -0.47
HDAC6-224ENST00000481929 CD83Q01151 205 aa12.1□□□□□ -0.47
HDAC6-224ENST00000481929 TRAP1Q12931 704 aaKnown RBP12.1□□□□□ -0.47
HDAC6-224ENST00000481929 VMACQ2NL98 169 aa12.1□□□□□ -0.47
HDAC6-224ENST00000481929 HCP5Q6MZN7 132 aa12.1□□□□□ -0.47
HDAC6-224ENST00000481929 NAA40Q86UY6 237 aa12.1□□□□□ -0.47
HDAC6-224ENST00000481929 OR5D13Q8NGL4 314 aa12.1□□□□□ -0.47
HDAC6-224ENST00000481929 OR9Q1Q8NGQ5 310 aa12.1□□□□□ -0.47
HDAC6-224ENST00000481929 OR10A6Q8NH74 314 aa12.1□□□□□ -0.47
HDAC6-224ENST00000481929 C12orf43Q96C57 262 aaKnown RBP12.1□□□□□ -0.47
HDAC6-224ENST00000481929 PRRC1Q96M27 445 aa12.1□□□□□ -0.47
HDAC6-224ENST00000481929 ATF6BQ99941 703 aa12.1□□□□□ -0.47
HDAC6-224ENST00000481929 CDCA4Q9BXL8 241 aa12.1□□□□□ -0.47
HDAC6-224ENST00000481929 NUAK2Q9H093 628 aa12.1□□□□□ -0.47
HDAC6-224ENST00000481929 NMNAT1Q9HAN9 279 aaPredicted RBP12.1□□□□□ -0.47
HDAC6-224ENST00000481929 VSX1Q9NZR4 365 aaPredicted RBP12.1□□□□□ -0.47
HDAC6-224ENST00000481929 NKX6-3A6NJ46 265 aa12.09□□□□□ -0.47
HDAC6-224ENST00000481929 H0YAE9 185 aa12.09□□□□□ -0.47
HDAC6-224ENST00000481929 IMPA2O14732 288 aa12.09□□□□□ -0.47
HDAC6-224ENST00000481929 CLIC3O95833 236 aa12.09□□□□□ -0.47
HDAC6-224ENST00000481929 SELLP14151 372 aa12.09□□□□□ -0.47
HDAC6-224ENST00000481929 POU1F1P28069 291 aa12.09□□□□□ -0.47
HDAC6-224ENST00000481929 SDHAP31040 664 aa12.09□□□□□ -0.47
HDAC6-224ENST00000481929 TGM4P49221 684 aa12.09□□□□□ -0.47
HDAC6-224ENST00000481929 TPTEP56180 551 aa12.09□□□□□ -0.47
HDAC6-224ENST00000481929 ZNF92Q03936 586 aa12.09□□□□□ -0.47
HDAC6-224ENST00000481929 PRKCDQ05655 676 aa12.09□□□□□ -0.47
HDAC6-224ENST00000481929 CNN3Q15417 329 aaKnown RBP12.09□□□□□ -0.47
HDAC6-224ENST00000481929 RABL3Q5HYI8 236 aa12.09□□□□□ -0.47
HDAC6-224ENST00000481929 DNM1P34Q6PK57 102 aa12.09□□□□□ -0.47
HDAC6-224ENST00000481929 CFAP77Q6ZQR2 320 aa12.09□□□□□ -0.47
HDAC6-224ENST00000481929 PIFOQ8TCI5 191 aa12.09□□□□□ -0.47
HDAC6-224ENST00000481929 SEH1LQ96EE3 360 aa12.09□□□□□ -0.47
HDAC6-224ENST00000481929 DUS3LQ96G46 650 aaKnown RBP12.09□□□□□ -0.47
HDAC6-224ENST00000481929 TRBV23-1A0A0A0MS06 115 aa12.08□□□□□ -0.48
HDAC6-224ENST00000481929 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.08□□□□□ -0.48
HDAC6-224ENST00000481929 ALDOBP05062 364 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms