RNA–Protein interactions for RNA: ENST00000481194.1

CCM2-214, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 5,304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-214ENST00000481194 FBXW9Q5XUX1 488 aa17.09■□□□□ 0.33
CCM2-214ENST00000481194 FOXRED2Q8IWF2 684 aa17.09■□□□□ 0.33
CCM2-214ENST00000481194 PRSS35Q8N3Z0 413 aa17.09■□□□□ 0.33
CCM2-214ENST00000481194 ITPKCQ96DU7 683 aa17.09■□□□□ 0.33
CCM2-214ENST00000481194 NPAP1Q9NZP6 1156 aa17.09■□□□□ 0.33
CCM2-214ENST00000481194 CHCHD2Q9Y6H1 151 aaPredicted RBP17.09■□□□□ 0.33
CCM2-214ENST00000481194 C2orf76Q3KRA6 126 aa17.09■□□□□ 0.33
CCM2-214ENST00000481194 PRR18Q8N4B5 295 aa17.09■□□□□ 0.33
CCM2-214ENST00000481194 DNAAF1Q8NEP3 725 aa17.09■□□□□ 0.33
CCM2-214ENST00000481194 SLC26A10Q8NG04 563 aa17.09■□□□□ 0.33
CCM2-214ENST00000481194 GSTP1P09211 210 aaKnown RBP17.09■□□□□ 0.33
CCM2-214ENST00000481194 TAS2R20P59543 309 aa17.09■□□□□ 0.33
CCM2-214ENST00000481194 PNLIPRP3Q17RR3 467 aa17.09■□□□□ 0.33
CCM2-214ENST00000481194 TMEM108Q6UXF1 575 aa17.09■□□□□ 0.33
CCM2-214ENST00000481194 UCN2Q96RP3 112 aa17.09■□□□□ 0.33
CCM2-214ENST00000481194 F5H5P2 479 aa17.08■□□□□ 0.33
CCM2-214ENST00000481194 SPINT2O43291 252 aa17.08■□□□□ 0.33
CCM2-214ENST00000481194 PEX14O75381 377 aa17.08■□□□□ 0.33
CCM2-214ENST00000481194 GLAP06280 429 aa17.08■□□□□ 0.33
CCM2-214ENST00000481194 ELMOD2Q8IZ81 293 aa17.08■□□□□ 0.33
CCM2-214ENST00000481194 RNF133Q8WVZ7 376 aa17.08■□□□□ 0.33
CCM2-214ENST00000481194 HYLS1Q96M11 299 aa17.08■□□□□ 0.33
CCM2-214ENST00000481194 LRFN3Q9BTN0 628 aa17.08■□□□□ 0.33
CCM2-214ENST00000481194 THADAQ6YHU6 1953 aa17.08■□□□□ 0.33
CCM2-214ENST00000481194 ZFPL1O95159 310 aa17.08■□□□□ 0.33
CCM2-214ENST00000481194 PRH1P02810 166 aa17.08■□□□□ 0.33
CCM2-214ENST00000481194 PCSK6P29122 969 aa17.08■□□□□ 0.33
CCM2-214ENST00000481194 EVX1P49640 407 aa17.08■□□□□ 0.33
CCM2-214ENST00000481194 SSX1Q16384 188 aa17.08■□□□□ 0.33
CCM2-214ENST00000481194 CD163Q86VB7 1156 aa17.08■□□□□ 0.33
CCM2-214ENST00000481194 MMP28Q9H239 520 aa17.08■□□□□ 0.33
CCM2-214ENST00000481194 GOSR2O14653 212 aa17.08■□□□□ 0.32
CCM2-214ENST00000481194 GDF9O60383 454 aa17.08■□□□□ 0.32
CCM2-214ENST00000481194 SCGB2A1O75556 95 aa17.08■□□□□ 0.32
CCM2-214ENST00000481194 DCTDP32321 178 aa17.08■□□□□ 0.32
CCM2-214ENST00000481194 TGIF1Q15583 401 aa17.08■□□□□ 0.32
CCM2-214ENST00000481194 INO80CQ6PI98 192 aaPredicted RBP17.08■□□□□ 0.32
CCM2-214ENST00000481194 TFAP2EQ6VUC0 442 aa17.08■□□□□ 0.32
CCM2-214ENST00000481194 DERL3Q96Q80 235 aa17.08■□□□□ 0.32
CCM2-214ENST00000481194 TMEM82A0PJX8 343 aa17.08■□□□□ 0.32
CCM2-214ENST00000481194 RP2O75695 350 aa17.08■□□□□ 0.32
CCM2-214ENST00000481194 SLC22A5O76082 557 aa17.08■□□□□ 0.32
CCM2-214ENST00000481194 HEXAP06865 529 aa17.08■□□□□ 0.32
CCM2-214ENST00000481194 ASB5Q8WWX0 329 aa17.08■□□□□ 0.32
CCM2-214ENST00000481194 IL1F10Q8WWZ1 152 aa17.08■□□□□ 0.32
CCM2-214ENST00000481194 ESRP2Q9H6T0 727 aaKnown RBP17.08■□□□□ 0.32
CCM2-214ENST00000481194 ZNF275Q9NSD4 429 aaPredicted RBP17.08■□□□□ 0.32
CCM2-214ENST00000481194 HMX3A6NHT5 357 aa17.07■□□□□ 0.32
CCM2-214ENST00000481194 RAB6AP20340 208 aa17.07■□□□□ 0.32
CCM2-214ENST00000481194 GPANK1O95872 356 aa17.07■□□□□ 0.32
CCM2-214ENST00000481194 STEAP3Q658P3 488 aa17.07■□□□□ 0.32
CCM2-214ENST00000481194 C12orf45Q8N5I9 185 aaPredicted RBP17.07■□□□□ 0.32
CCM2-214ENST00000481194 ABHD3Q8WU67 409 aa17.07■□□□□ 0.32
CCM2-214ENST00000481194 DEDD2Q8WXF8 326 aa17.07■□□□□ 0.32
CCM2-214ENST00000481194 CCDC120Q96HB5 630 aa17.07■□□□□ 0.32
CCM2-214ENST00000481194 M0R233 179 aa17.07■□□□□ 0.32
CCM2-214ENST00000481194 GNG3P63215 75 aa17.07■□□□□ 0.32
CCM2-214ENST00000481194 IDO2Q6ZQW0 420 aa17.07■□□□□ 0.32
CCM2-214ENST00000481194 FN3KRPQ9HA64 309 aa17.07■□□□□ 0.32
CCM2-214ENST00000481194 TMA7Q9Y2S6 64 aaKnown RBP17.07■□□□□ 0.32
CCM2-214ENST00000481194 UNC13CQ8NB66 2214 aa17.07■□□□□ 0.32
CCM2-214ENST00000481194 ZNF724A8MTY0 619 aa17.07■□□□□ 0.32
CCM2-214ENST00000481194 SMAD9O15198 467 aaKnown RBP17.07■□□□□ 0.32
CCM2-214ENST00000481194 IL13RA1P78552 427 aa17.07■□□□□ 0.32
CCM2-214ENST00000481194 CATSPERDQ86XM0 798 aa17.07■□□□□ 0.32
CCM2-214ENST00000481194 SIAH3Q8IW03 269 aa17.07■□□□□ 0.32
CCM2-214ENST00000481194 ZNF441Q8N8Z8 693 aa17.07■□□□□ 0.32
CCM2-214ENST00000481194 WNT2BQ93097 391 aa17.07■□□□□ 0.32
CCM2-214ENST00000481194 OR2H1Q9GZK4 316 aa17.07■□□□□ 0.32
CCM2-214ENST00000481194 FAHP16930 419 aa17.06■□□□□ 0.32
CCM2-214ENST00000481194 SLC25A53Q5H9E4 307 aa17.06■□□□□ 0.32
CCM2-214ENST00000481194 KANSL1Q7Z3B3 1105 aa17.06■□□□□ 0.32
CCM2-214ENST00000481194 GP6Q9HCN6 339 aa17.06■□□□□ 0.32
CCM2-214ENST00000481194 DLX5P56178 289 aa17.06■□□□□ 0.32
CCM2-214ENST00000481194 ASAH1Q13510 395 aa17.06■□□□□ 0.32
CCM2-214ENST00000481194 OR6K3Q8NGY3 331 aa17.06■□□□□ 0.32
CCM2-214ENST00000481194 IGKV1D-42A0A075B6H8 117 aa17.06■□□□□ 0.32
CCM2-214ENST00000481194 TRIM64CA6NLI5 447 aa17.06■□□□□ 0.32
CCM2-214ENST00000481194 BMP5P22003 454 aa17.06■□□□□ 0.32
CCM2-214ENST00000481194 OR56B2PQ8NGI1 322 aa17.06■□□□□ 0.32
CCM2-214ENST00000481194 BANF2Q9H503 90 aa17.06■□□□□ 0.32
CCM2-214ENST00000481194 CNOT4O95628 575 aaKnown RBP17.06■□□□□ 0.32
CCM2-214ENST00000481194 PAHP00439 452 aa17.06■□□□□ 0.32
CCM2-214ENST00000481194 OR10A3P58181 314 aa17.06■□□□□ 0.32
CCM2-214ENST00000481194 FOXB2Q5VYV0 432 aa17.06■□□□□ 0.32
CCM2-214ENST00000481194 GDPD3Q7L5L3 318 aa17.06■□□□□ 0.32
CCM2-214ENST00000481194 C20orf196Q8IYI0 205 aa17.06■□□□□ 0.32
CCM2-214ENST00000481194 MPC1Q9Y5U8 109 aa17.06■□□□□ 0.32
CCM2-214ENST00000481194 MEIOCA2RUB1 952 aa17.06■□□□□ 0.32
CCM2-214ENST00000481194 TNFRSF1AP19438 455 aa17.06■□□□□ 0.32
CCM2-214ENST00000481194 PCM1Q15154 2024 aa17.06■□□□□ 0.32
CCM2-214ENST00000481194 SMIM21Q3B7S5 101 aa17.06■□□□□ 0.32
CCM2-214ENST00000481194 CDCP2Q5VXM1 449 aa17.06■□□□□ 0.32
CCM2-214ENST00000481194 LYSMD2Q8IV50 215 aa17.06■□□□□ 0.32
CCM2-214ENST00000481194 OSR2Q8N2R0 312 aa17.06■□□□□ 0.32
CCM2-214ENST00000481194 FADS6Q8N9I5 356 aa17.06■□□□□ 0.32
CCM2-214ENST00000481194 ZNF610Q8N9Z0 462 aa17.06■□□□□ 0.32
CCM2-214ENST00000481194 VOPP1Q96AW1 172 aa17.06■□□□□ 0.32
CCM2-214ENST00000481194 PIGMQ9H3S5 423 aa17.06■□□□□ 0.32
CCM2-214ENST00000481194 IL3RAP26951 378 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms