RNA–Protein interactions for RNA: ENST00000480158.1

HERC4-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,438 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-210ENST00000480158 CRNNQ9UBG3 495 aaPredicted RBP5.54□□□□□ -1.52
HERC4-210ENST00000480158 DUSP13Q9UII6 198 aa5.54□□□□□ -1.52
HERC4-210ENST00000480158 ATP23Q9Y6H3 246 aa5.54□□□□□ -1.52
HERC4-210ENST00000480158 HRNRQ86YZ3 2850 aaPredicted RBP5.53□□□□□ -1.52
HERC4-210ENST00000480158 LOC107986453A0A1B0GWG9 222 aa5.53□□□□□ -1.52
HERC4-210ENST00000480158 CCDC160A6NGH7 325 aa5.53□□□□□ -1.52
HERC4-210ENST00000480158 ACOD1A6NK06 481 aa5.53□□□□□ -1.52
HERC4-210ENST00000480158 CCRL2O00421 344 aa5.53□□□□□ -1.52
HERC4-210ENST00000480158 OGG1O15527 345 aa5.53□□□□□ -1.52
HERC4-210ENST00000480158 SYT7O43581 403 aa5.53□□□□□ -1.52
HERC4-210ENST00000480158 PLPP2O43688 288 aa5.53□□□□□ -1.52
HERC4-210ENST00000480158 OCM2P0CE71 109 aa5.53□□□□□ -1.52
HERC4-210ENST00000480158 CPEP16870 476 aa5.53□□□□□ -1.52
HERC4-210ENST00000480158 GADD45AP24522 165 aa5.53□□□□□ -1.52
HERC4-210ENST00000480158 DCTDP32321 178 aa5.53□□□□□ -1.52
HERC4-210ENST00000480158 TGFBR1P36897 503 aa5.53□□□□□ -1.52
HERC4-210ENST00000480158 TGM4P49221 684 aa5.53□□□□□ -1.52
HERC4-210ENST00000480158 TAS2R43P59537 309 aa5.53□□□□□ -1.52
HERC4-210ENST00000480158 PPP1CBP62140 327 aa5.53□□□□□ -1.52
HERC4-210ENST00000480158 MALLQ13021 153 aa5.53□□□□□ -1.52
HERC4-210ENST00000480158 GK2Q14410 553 aaPredicted RBP5.53□□□□□ -1.52
HERC4-210ENST00000480158 KRTAP27-1Q3LI81 207 aa5.53□□□□□ -1.52
HERC4-210ENST00000480158 CCDC58Q4VC31 144 aa5.53□□□□□ -1.52
HERC4-210ENST00000480158 FAM27D1Q5T7N8 215 aa5.53□□□□□ -1.52
HERC4-210ENST00000480158 ZNF544Q6NX49 715 aa5.53□□□□□ -1.52
HERC4-210ENST00000480158 PGAP1Q75T13 922 aa5.53□□□□□ -1.52
HERC4-210ENST00000480158 GPR141Q7Z602 305 aa5.53□□□□□ -1.52
HERC4-210ENST00000480158 DMRTC2Q8IXT2 367 aaPredicted RBP5.53□□□□□ -1.52
HERC4-210ENST00000480158 OR52H1Q8NGJ2 320 aa5.53□□□□□ -1.52
HERC4-210ENST00000480158 SLC25A40Q8TBP6 338 aa5.53□□□□□ -1.52
HERC4-210ENST00000480158 RGP1Q92546 391 aaPredicted RBP5.53□□□□□ -1.52
HERC4-210ENST00000480158 PGLYRP3Q96LB9 341 aa5.53□□□□□ -1.52
HERC4-210ENST00000480158 OR14A2Q96R54 314 aa5.53□□□□□ -1.52
HERC4-210ENST00000480158 CHCHD6Q9BRQ6 235 aa5.53□□□□□ -1.52
HERC4-210ENST00000480158 C1QTNF5Q9BXJ0 243 aa5.53□□□□□ -1.52
HERC4-210ENST00000480158 OR51E2Q9H255 320 aa5.53□□□□□ -1.52
HERC4-210ENST00000480158 RNF167Q9H6Y7 350 aa5.53□□□□□ -1.52
HERC4-210ENST00000480158 PPP1R3EQ9H7J1 279 aa5.53□□□□□ -1.52
HERC4-210ENST00000480158 NUFIP1Q9UHK0 495 aaKnown RBP5.53□□□□□ -1.52
HERC4-210ENST00000480158 CELSR2Q9HCU4 2923 aa5.53□□□□□ -1.52
HERC4-210ENST00000480158 ANKHD1Q8IWZ3 2542 aaKnown RBP5.53□□□□□ -1.52
HERC4-210ENST00000480158 A0A1B0GVI7 797 aa5.53□□□□□ -1.52
HERC4-210ENST00000480158 TMEM212A6NML5 194 aa5.53□□□□□ -1.52
HERC4-210ENST00000480158 DEFB108AA8MXU0 73 aa5.53□□□□□ -1.52
HERC4-210ENST00000480158 H3BSA7 217 aa5.53□□□□□ -1.52
HERC4-210ENST00000480158 CD3EP07766 207 aa5.53□□□□□ -1.52
HERC4-210ENST00000480158 JUNBP17275 347 aaPredicted RBP5.53□□□□□ -1.52
HERC4-210ENST00000480158 MPV17P39210 176 aa5.53□□□□□ -1.52
HERC4-210ENST00000480158 RAD52P43351 418 aa5.53□□□□□ -1.52
HERC4-210ENST00000480158 FABP5Q01469 135 aa5.53□□□□□ -1.52
HERC4-210ENST00000480158 ACSM1Q08AH1 577 aa5.53□□□□□ -1.52
HERC4-210ENST00000480158 TPBGQ13641 420 aa5.53□□□□□ -1.52
HERC4-210ENST00000480158 NCMAPQ5T1S8 102 aa5.53□□□□□ -1.52
HERC4-210ENST00000480158 HIST2H2BCQ6DN03 193 aa5.53□□□□□ -1.52
HERC4-210ENST00000480158 OR2T2Q6IF00 324 aa5.53□□□□□ -1.52
HERC4-210ENST00000480158 COLCA1Q6ZS62 124 aa5.53□□□□□ -1.52
HERC4-210ENST00000480158 MRPL21Q7Z2W9 205 aaKnown RBP5.53□□□□□ -1.52
HERC4-210ENST00000480158 REC114Q7Z4M0 266 aa5.53□□□□□ -1.52
HERC4-210ENST00000480158 CEACAM19Q7Z692 300 aa5.53□□□□□ -1.52
HERC4-210ENST00000480158 LRP11Q86VZ4 500 aa5.53□□□□□ -1.52
HERC4-210ENST00000480158 CLVS1Q8IUQ0 354 aaPredicted RBP5.53□□□□□ -1.52
HERC4-210ENST00000480158 OR13F1Q8NGS4 319 aa5.53□□□□□ -1.52
HERC4-210ENST00000480158 OR13C3Q8NGS6 347 aa5.53□□□□□ -1.52
HERC4-210ENST00000480158 CMBLQ96DG6 245 aa5.53□□□□□ -1.52
HERC4-210ENST00000480158 TRMT61AQ96FX7 289 aaKnown RBP5.53□□□□□ -1.52
HERC4-210ENST00000480158 SYT3Q9BQG1 590 aa5.53□□□□□ -1.52
HERC4-210ENST00000480158 FUNDC2Q9BWH2 189 aa5.53□□□□□ -1.52
HERC4-210ENST00000480158 OR10A4Q9H209 315 aa5.53□□□□□ -1.52
HERC4-210ENST00000480158 TBCCD1Q9NVR7 557 aa5.53□□□□□ -1.52
HERC4-210ENST00000480158 PFDN2Q9UHV9 154 aa5.53□□□□□ -1.52
HERC4-210ENST00000480158 ATPIF1Q9UII2 106 aa5.53□□□□□ -1.52
HERC4-210ENST00000480158 ZNF281Q9Y2X9 895 aa5.53□□□□□ -1.52
HERC4-210ENST00000480158 CENPEQ02224 2701 aa5.53□□□□□ -1.52
HERC4-210ENST00000480158 HCFC1P51610 2035 aa5.52□□□□□ -1.53
HERC4-210ENST00000480158 IGHV3-64DA0A0J9YX35 117 aa5.52□□□□□ -1.53
HERC4-210ENST00000480158 A0A1B0GTI1 187 aa5.52□□□□□ -1.53
HERC4-210ENST00000480158 SMIM30A4D0T7 59 aa5.52□□□□□ -1.53
HERC4-210ENST00000480158 DPPA5A6NC42 116 aa5.52□□□□□ -1.53
HERC4-210ENST00000480158 GGT3PA6NGU5 568 aa5.52□□□□□ -1.53
HERC4-210ENST00000480158 UBCP0CG48 685 aaKnown RBP5.52□□□□□ -1.53
HERC4-210ENST00000480158 FAHP16930 419 aa5.52□□□□□ -1.53
HERC4-210ENST00000480158 ACKR3P25106 362 aa5.52□□□□□ -1.53
HERC4-210ENST00000480158 PSMA1P25786 263 aaKnown RBP5.52□□□□□ -1.53
HERC4-210ENST00000480158 THBS4P35443 961 aa5.52□□□□□ -1.53
HERC4-210ENST00000480158 TGFBR2P37173 567 aa5.52□□□□□ -1.53
HERC4-210ENST00000480158 GNALP38405 381 aa5.52□□□□□ -1.53
HERC4-210ENST00000480158 ALDH3B2P48448 385 aa5.52□□□□□ -1.53
HERC4-210ENST00000480158 CCR9P51686 369 aa5.52□□□□□ -1.53
HERC4-210ENST00000480158 RPS11P62280 158 aaKnown RBP eCLIP5.52□□□□□ -1.53
HERC4-210ENST00000480158 BDH1Q02338 343 aa5.52□□□□□ -1.53
HERC4-210ENST00000480158 MRPL28Q13084 256 aaKnown RBP5.52□□□□□ -1.53
HERC4-210ENST00000480158 BLMHQ13867 455 aa5.52□□□□□ -1.53
HERC4-210ENST00000480158 MSMPQ1L6U9 139 aa5.52□□□□□ -1.53
HERC4-210ENST00000480158 ACSM3Q53FZ2 586 aa5.52□□□□□ -1.53
HERC4-210ENST00000480158 BEX5Q5H9J7 111 aa5.52□□□□□ -1.53
HERC4-210ENST00000480158 SP5Q6BEB4 398 aaPredicted RBP5.52□□□□□ -1.53
HERC4-210ENST00000480158 C22orf42Q6IC83 251 aa5.52□□□□□ -1.53
HERC4-210ENST00000480158 FDX2Q6P4F2 183 aa5.52□□□□□ -1.53
HERC4-210ENST00000480158 ZNF704Q6ZNC4 412 aaPredicted RBP5.52□□□□□ -1.53
HERC4-210ENST00000480158 KLF14Q8TD94 323 aaPredicted RBP5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms