RNA–Protein interactions for RNA: ENST00000479177.1

USP48-208, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-208ENST00000479177 EEF1E1-BLOC1S5C9J1V9 151 aa5.77□□□□□ -1.49
USP48-208ENST00000479177 LOC110117498-PIK3R3F6TDL0 507 aa5.77□□□□□ -1.49
USP48-208ENST00000479177 H3BMQ9 156 aa5.77□□□□□ -1.49
USP48-208ENST00000479177 CCL21O00585 134 aa5.77□□□□□ -1.49
USP48-208ENST00000479177 EEF1E1O43324 174 aaKnown RBP5.77□□□□□ -1.49
USP48-208ENST00000479177 AIREO43918 545 aa5.77□□□□□ -1.49
USP48-208ENST00000479177 GPRIN2O60269 458 aa5.77□□□□□ -1.49
USP48-208ENST00000479177 NOL3O60936 208 aaKnown RBP5.77□□□□□ -1.49
USP48-208ENST00000479177 GPX5O75715 221 aa5.77□□□□□ -1.49
USP48-208ENST00000479177 UBL3O95164 117 aa5.77□□□□□ -1.49
USP48-208ENST00000479177 PNPP00491 289 aa5.77□□□□□ -1.49
USP48-208ENST00000479177 COX5BP10606 129 aa5.77□□□□□ -1.49
USP48-208ENST00000479177 CD79AP11912 226 aa5.77□□□□□ -1.49
USP48-208ENST00000479177 PSMB1P20618 241 aaKnown RBP5.77□□□□□ -1.49
USP48-208ENST00000479177 ANOS1P23352 680 aa5.77□□□□□ -1.49
USP48-208ENST00000479177 PSMA1P25786 263 aaKnown RBP5.77□□□□□ -1.49
USP48-208ENST00000479177 HSD11B1P28845 292 aa5.77□□□□□ -1.49
USP48-208ENST00000479177 ARR3P36575 388 aa5.77□□□□□ -1.49
USP48-208ENST00000479177 CRYBB2P43320 205 aa5.77□□□□□ -1.49
USP48-208ENST00000479177 HTR5AP47898 357 aa5.77□□□□□ -1.49
USP48-208ENST00000479177 UQCRFS1P47985 274 aa5.77□□□□□ -1.49
USP48-208ENST00000479177 CX3CR1P49238 355 aa5.77□□□□□ -1.49
USP48-208ENST00000479177 CCR9P51686 369 aa5.77□□□□□ -1.49
USP48-208ENST00000479177 PRKXP51817 358 aa5.77□□□□□ -1.49
USP48-208ENST00000479177 TMBIM6P55061 237 aa5.77□□□□□ -1.49
USP48-208ENST00000479177 TUBA1BP68363 451 aa5.77□□□□□ -1.49
USP48-208ENST00000479177 ADORA2A-AS1P86434 159 aa5.77□□□□□ -1.49
USP48-208ENST00000479177 HGFACQ04756 655 aa5.77□□□□□ -1.49
USP48-208ENST00000479177 SLC3A1Q07837 685 aa5.77□□□□□ -1.49
USP48-208ENST00000479177 TAF13Q15543 124 aa5.77□□□□□ -1.49
USP48-208ENST00000479177 TSC22D1Q15714 1073 aa5.77□□□□□ -1.49
USP48-208ENST00000479177 CTF1Q16619 201 aa5.77□□□□□ -1.49
USP48-208ENST00000479177 RSPO1Q2MKA7 263 aaPredicted RBP5.77□□□□□ -1.49
USP48-208ENST00000479177 TIMM50Q3ZCQ8 353 aa5.77□□□□□ -1.49
USP48-208ENST00000479177 BCL2L15Q5TBC7 163 aa5.77□□□□□ -1.49
USP48-208ENST00000479177 TMEM53Q6P2H8 277 aa5.77□□□□□ -1.49
USP48-208ENST00000479177 CD200R1LQ6Q8B3 271 aa5.77□□□□□ -1.49
USP48-208ENST00000479177 STAC2Q6ZMT1 411 aa5.77□□□□□ -1.49
USP48-208ENST00000479177 TUBA1AQ71U36 451 aa5.77□□□□□ -1.49
USP48-208ENST00000479177 BHLHA15Q7RTS1 189 aaPredicted RBP5.77□□□□□ -1.49
USP48-208ENST00000479177 PRSS45Q7RTY3 260 aa5.77□□□□□ -1.49
USP48-208ENST00000479177 LUZP2Q86TE4 346 aa5.77□□□□□ -1.49
USP48-208ENST00000479177 MDP1Q86V88 176 aa5.77□□□□□ -1.49
USP48-208ENST00000479177 LIX1LQ8IVB5 337 aa5.77□□□□□ -1.49
USP48-208ENST00000479177 CCDC36Q8IYA8 594 aa5.77□□□□□ -1.49
USP48-208ENST00000479177 PRSS35Q8N3Z0 413 aa5.77□□□□□ -1.49
USP48-208ENST00000479177 DTX3Q8N9I9 347 aa5.77□□□□□ -1.49
USP48-208ENST00000479177 WDR31Q8NA23 367 aa5.77□□□□□ -1.49
USP48-208ENST00000479177 RAB2BQ8WUD1 216 aa5.77□□□□□ -1.49
USP48-208ENST00000479177 SLC7A6Q92536 515 aa5.77□□□□□ -1.49
USP48-208ENST00000479177 GHSRQ92847 366 aa5.77□□□□□ -1.49
USP48-208ENST00000479177 TRMT61AQ96FX7 289 aaKnown RBP5.77□□□□□ -1.49
USP48-208ENST00000479177 ZNF75AQ96N20 296 aa5.77□□□□□ -1.49
USP48-208ENST00000479177 DCLRE1CQ96SD1 692 aaKnown RBP5.77□□□□□ -1.49
USP48-208ENST00000479177 PDCD1LG2Q9BQ51 273 aa5.77□□□□□ -1.49
USP48-208ENST00000479177 TMED9Q9BVK6 235 aa5.77□□□□□ -1.49
USP48-208ENST00000479177 OR51E2Q9H255 320 aa5.77□□□□□ -1.49
USP48-208ENST00000479177 OBP2BQ9NPH6 170 aa5.77□□□□□ -1.49
USP48-208ENST00000479177 G6PC2Q9NQR9 355 aa5.77□□□□□ -1.49
USP48-208ENST00000479177 B3GNT2Q9NY97 397 aa5.77□□□□□ -1.49
USP48-208ENST00000479177 RSL24D1Q9UHA3 163 aaKnown RBP5.77□□□□□ -1.49
USP48-208ENST00000479177 NUFIP1Q9UHK0 495 aaKnown RBP5.77□□□□□ -1.49
USP48-208ENST00000479177 SLC22A13Q9Y226 551 aa5.77□□□□□ -1.49
USP48-208ENST00000479177 ADGRG4Q8IZF6 3080 aa5.77□□□□□ -1.49
USP48-208ENST00000479177 ABCA4P78363 2273 aa5.76□□□□□ -1.49
USP48-208ENST00000479177 TRBV2A0A0J9YWF9 115 aa5.76□□□□□ -1.49
USP48-208ENST00000479177 TRBV5-5A0A0J9YX44 114 aa5.76□□□□□ -1.49
USP48-208ENST00000479177 TMEM269A0A1B0GVZ9 245 aa5.76□□□□□ -1.49
USP48-208ENST00000479177 LOC107986453A0A1B0GWG9 222 aa5.76□□□□□ -1.49
USP48-208ENST00000479177 CCDC160A6NGH7 325 aa5.76□□□□□ -1.49
USP48-208ENST00000479177 TRIM64BA6NI03 449 aa5.76□□□□□ -1.49
USP48-208ENST00000479177 OR5H1A6NKK0 313 aa5.76□□□□□ -1.49
USP48-208ENST00000479177 A8MXE2 369 aa5.76□□□□□ -1.49
USP48-208ENST00000479177 M0R135 149 aa5.76□□□□□ -1.49
USP48-208ENST00000479177 GABRPO00591 440 aa5.76□□□□□ -1.49
USP48-208ENST00000479177 SC5DO75845 299 aa5.76□□□□□ -1.49
USP48-208ENST00000479177 C1QL1O75973 258 aa5.76□□□□□ -1.49
USP48-208ENST00000479177 ZFPL1O95159 310 aa5.76□□□□□ -1.49
USP48-208ENST00000479177 APOC1P02654 83 aa5.76□□□□□ -1.49
USP48-208ENST00000479177 HLA-DPB1P04440 258 aa5.76□□□□□ -1.49
USP48-208ENST00000479177 ACSM4P0C7M7 580 aa5.76□□□□□ -1.49
USP48-208ENST00000479177 SLC2A1P11166 492 aa5.76□□□□□ -1.49
USP48-208ENST00000479177 ACHEP22303 614 aa5.76□□□□□ -1.49
USP48-208ENST00000479177 GALP22466 123 aa5.76□□□□□ -1.49
USP48-208ENST00000479177 NR4A1P22736 598 aa5.76□□□□□ -1.49
USP48-208ENST00000479177 GNLYP22749 145 aa5.76□□□□□ -1.49
USP48-208ENST00000479177 IL32P24001 234 aa5.76□□□□□ -1.49
USP48-208ENST00000479177 CHRNB4P30926 498 aa5.76□□□□□ -1.49
USP48-208ENST00000479177 ZNF121P58317 390 aaPredicted RBP5.76□□□□□ -1.49
USP48-208ENST00000479177 UBE2NP61088 152 aaKnown RBP5.76□□□□□ -1.49
USP48-208ENST00000479177 RPS11P62280 158 aaKnown RBP eCLIP5.76□□□□□ -1.49
USP48-208ENST00000479177 GALK2Q01415 458 aa5.76□□□□□ -1.49
USP48-208ENST00000479177 FABP5Q01469 135 aa5.76□□□□□ -1.49
USP48-208ENST00000479177 TLE1Q04724 770 aa5.76□□□□□ -1.49
USP48-208ENST00000479177 TRAM1Q15629 374 aa5.76□□□□□ -1.49
USP48-208ENST00000479177 GSG1Q2KHT4 349 aa5.76□□□□□ -1.49
USP48-208ENST00000479177 SLC25A35Q3KQZ1 300 aa5.76□□□□□ -1.49
USP48-208ENST00000479177 SOWAHCQ53LP3 525 aaPredicted RBP5.76□□□□□ -1.49
USP48-208ENST00000479177 ZNF544Q6NX49 715 aa5.76□□□□□ -1.49
USP48-208ENST00000479177 DRAM2Q6UX65 266 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms