RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 IGHV4-61A0A0C4DH41 118 aa13.1□□□□□ -0.31
C9orf3-217ENST00000479161 CLDN25C9JDP6 229 aa13.1□□□□□ -0.31
C9orf3-217ENST00000479161 ZNF670-ZNF695F2Z2N8 137 aa13.1□□□□□ -0.31
C9orf3-217ENST00000479161 DLGAP1O14490 977 aa13.1□□□□□ -0.31
C9orf3-217ENST00000479161 TPD52L2O43399 206 aaKnown RBP13.1□□□□□ -0.31
C9orf3-217ENST00000479161 SULT1C4O75897 302 aa13.1□□□□□ -0.31
C9orf3-217ENST00000479161 ANXA2P07355 339 aaKnown RBP13.1□□□□□ -0.31
C9orf3-217ENST00000479161 CD200P41217 278 aa13.1□□□□□ -0.31
C9orf3-217ENST00000479161 MTNR1AP48039 350 aa13.1□□□□□ -0.31
C9orf3-217ENST00000479161 RIDAP52758 137 aaKnown RBP13.1□□□□□ -0.31
C9orf3-217ENST00000479161 FAM3AP98173 230 aa13.1□□□□□ -0.31
C9orf3-217ENST00000479161 MZT1Q08AG7 82 aa13.1□□□□□ -0.31
C9orf3-217ENST00000479161 RCN1Q15293 331 aa13.1□□□□□ -0.31
C9orf3-217ENST00000479161 OR8B8Q15620 311 aa13.1□□□□□ -0.31
C9orf3-217ENST00000479161 CARTPTQ16568 116 aa13.1□□□□□ -0.31
C9orf3-217ENST00000479161 ZIK1Q3SY52 487 aaPredicted RBP13.1□□□□□ -0.31
C9orf3-217ENST00000479161 ZNF322Q6U7Q0 402 aaPredicted RBP13.1□□□□□ -0.31
C9orf3-217ENST00000479161 LRRN1Q6UXK5 716 aa13.1□□□□□ -0.31
C9orf3-217ENST00000479161 FTMTQ8N4E7 242 aa13.1□□□□□ -0.31
C9orf3-217ENST00000479161 CSNK2A3Q8NEV1 391 aa13.1□□□□□ -0.31
C9orf3-217ENST00000479161 TIMD4Q96H15 378 aa13.1□□□□□ -0.31
C9orf3-217ENST00000479161 MYCBPQ99417 103 aaPredicted RBP13.1□□□□□ -0.31
C9orf3-217ENST00000479161 SMR3AQ99954 134 aa13.1□□□□□ -0.31
C9orf3-217ENST00000479161 GSX1Q9H4S2 264 aaPredicted RBP13.1□□□□□ -0.31
C9orf3-217ENST00000479161 MOB1AQ9H8S9 216 aa13.1□□□□□ -0.31
C9orf3-217ENST00000479161 FAM206AQ9NX38 181 aa13.1□□□□□ -0.31
C9orf3-217ENST00000479161 COPS3Q9UNS2 423 aa13.1□□□□□ -0.31
C9orf3-217ENST00000479161 FN1P02751 2386 aaKnown RBP13.1□□□□□ -0.31
C9orf3-217ENST00000479161 hCG_38984A0A1B0GV85 526 aa13.09□□□□□ -0.31
C9orf3-217ENST00000479161 GGT3PA6NGU5 568 aa13.09□□□□□ -0.31
C9orf3-217ENST00000479161 LYNX1G3V0Z9 82 aa13.09□□□□□ -0.31
C9orf3-217ENST00000479161 J3QRE1 110 aa13.09□□□□□ -0.31
C9orf3-217ENST00000479161 MLNRO43193 412 aa13.09□□□□□ -0.31
C9orf3-217ENST00000479161 IGLV3-1P01715 115 aa13.09□□□□□ -0.31
C9orf3-217ENST00000479161 MRPL3P09001 348 aaKnown RBP13.09□□□□□ -0.31
C9orf3-217ENST00000479161 LYNX1P0DP58 116 aa13.09□□□□□ -0.31
C9orf3-217ENST00000479161 SLC2A1P11166 492 aa13.09□□□□□ -0.31
C9orf3-217ENST00000479161 HCCSP53701 268 aa13.09□□□□□ -0.31
C9orf3-217ENST00000479161 CXCR4P61073 352 aa13.09□□□□□ -0.31
C9orf3-217ENST00000479161 TIGD6Q17RP2 521 aa13.09□□□□□ -0.31
C9orf3-217ENST00000479161 ZNF829Q3KNS6 432 aaPredicted RBP13.09□□□□□ -0.31
C9orf3-217ENST00000479161 ZNF684Q5T5D7 378 aa13.09□□□□□ -0.31
C9orf3-217ENST00000479161 OGFRL1Q5TC84 451 aaPredicted RBP13.09□□□□□ -0.31
C9orf3-217ENST00000479161 TTC23Q5W5X9 447 aa13.09□□□□□ -0.31
C9orf3-217ENST00000479161 LPCAT4Q643R3 524 aa13.09□□□□□ -0.31
C9orf3-217ENST00000479161 CYB5R2Q6BCY4 276 aa13.09□□□□□ -0.31
C9orf3-217ENST00000479161 FAM57BQ71RH2 274 aa13.09□□□□□ -0.31
C9orf3-217ENST00000479161 SPATC1Q76KD6 591 aa13.09□□□□□ -0.31
C9orf3-217ENST00000479161 KCTD20Q7Z5Y7 419 aa13.09□□□□□ -0.31
C9orf3-217ENST00000479161 OR5AS1Q8N127 324 aa13.09□□□□□ -0.31
C9orf3-217ENST00000479161 OR51G2Q8NGK0 314 aa13.09□□□□□ -0.31
C9orf3-217ENST00000479161 OR2AE1Q8NHA4 323 aa13.09□□□□□ -0.31
C9orf3-217ENST00000479161 RAB1CQ92928 201 aa13.09□□□□□ -0.31
C9orf3-217ENST00000479161 REEP6Q96HR9 211 aa13.09□□□□□ -0.31
C9orf3-217ENST00000479161 PGAM5Q96HS1 289 aa13.09□□□□□ -0.31
C9orf3-217ENST00000479161 MEGF10Q96KG7 1140 aa13.09□□□□□ -0.31
C9orf3-217ENST00000479161 OR2V2Q96R30 315 aa13.09□□□□□ -0.31
C9orf3-217ENST00000479161 APOL4Q9BPW4 351 aa13.09□□□□□ -0.31
C9orf3-217ENST00000479161 ABCB9Q9NP78 766 aa13.09□□□□□ -0.31
C9orf3-217ENST00000479161 MRPS18AQ9NVS2 196 aaKnown RBP13.09□□□□□ -0.31
C9orf3-217ENST00000479161 TMEM160Q9NX00 188 aa13.09□□□□□ -0.31
C9orf3-217ENST00000479161 ZNF319Q9P2F9 582 aa13.09□□□□□ -0.31
C9orf3-217ENST00000479161 NUFIP1Q9UHK0 495 aaKnown RBP13.09□□□□□ -0.31
C9orf3-217ENST00000479161 PPP1R3CQ9UQK1 317 aa13.09□□□□□ -0.31
C9orf3-217ENST00000479161 ABCA2Q9BZC7 2435 aa13.09□□□□□ -0.31
C9orf3-217ENST00000479161 TMEM269A0A1B0GVZ9 245 aa13.08□□□□□ -0.32
C9orf3-217ENST00000479161 C5orf63A6NC05 138 aa13.08□□□□□ -0.32
C9orf3-217ENST00000479161 PPIHO43447 177 aaKnown RBP13.08□□□□□ -0.32
C9orf3-217ENST00000479161 SRSF10O75494 262 aaKnown RBP13.08□□□□□ -0.32
C9orf3-217ENST00000479161 ACTC1P68032 377 aa13.08□□□□□ -0.32
C9orf3-217ENST00000479161 ACTA1P68133 377 aa13.08□□□□□ -0.32
C9orf3-217ENST00000479161 ELF3P78545 371 aaPredicted RBP13.08□□□□□ -0.32
C9orf3-217ENST00000479161 TRIP10Q15642 601 aa13.08□□□□□ -0.32
C9orf3-217ENST00000479161 ZBTB37Q5TC79 503 aa13.08□□□□□ -0.32
C9orf3-217ENST00000479161 Q6ZSR3 168 aa13.08□□□□□ -0.32
C9orf3-217ENST00000479161 PEG10Q86TG7 708 aaKnown RBP13.08□□□□□ -0.32
C9orf3-217ENST00000479161 ENTHD1Q8IYW4 607 aa13.08□□□□□ -0.32
C9orf3-217ENST00000479161 ZNF555Q8NEP9 628 aa13.08□□□□□ -0.32
C9orf3-217ENST00000479161 Q8TCH9 128 aa13.08□□□□□ -0.32
C9orf3-217ENST00000479161 CCL17Q92583 94 aa13.08□□□□□ -0.32
C9orf3-217ENST00000479161 UBE2FQ969M7 185 aa13.08□□□□□ -0.32
C9orf3-217ENST00000479161 GCM1Q9NP62 436 aa13.08□□□□□ -0.32
C9orf3-217ENST00000479161 TMEM106BQ9NUM4 274 aa13.08□□□□□ -0.32
C9orf3-217ENST00000479161 DNAJC27Q9NZQ0 273 aa13.08□□□□□ -0.32
C9orf3-217ENST00000479161 EXOGQ9Y2C4 368 aaKnown RBP13.08□□□□□ -0.32
C9orf3-217ENST00000479161 DOCK11Q5JSL3 2073 aa13.08□□□□□ -0.32
C9orf3-217ENST00000479161 PRR32B1ATL7 298 aa13.07□□□□□ -0.32
C9orf3-217ENST00000479161 TBX1O43435 398 aa13.07□□□□□ -0.32
C9orf3-217ENST00000479161 CDC14BO60729 498 aa13.07□□□□□ -0.32
C9orf3-217ENST00000479161 ENTPD6O75354 484 aa13.07□□□□□ -0.32
C9orf3-217ENST00000479161 IGHV4-31P0DP07 118 aa13.07□□□□□ -0.32
C9orf3-217ENST00000479161 ANOS1P23352 680 aa13.07□□□□□ -0.32
C9orf3-217ENST00000479161 ATP6V1E1P36543 226 aa13.07□□□□□ -0.32
C9orf3-217ENST00000479161 GSK3AP49840 483 aa13.07□□□□□ -0.32
C9orf3-217ENST00000479161 ISL1P61371 349 aa13.07□□□□□ -0.32
C9orf3-217ENST00000479161 IL18R1Q13478 541 aa13.07□□□□□ -0.32
C9orf3-217ENST00000479161 PLEKHG7Q6ZR37 379 aa13.07□□□□□ -0.32
C9orf3-217ENST00000479161 MAPK1IP1LQ8NDC0 245 aa13.07□□□□□ -0.32
C9orf3-217ENST00000479161 BHLHE23Q8NDY6 225 aa13.07□□□□□ -0.32
C9orf3-217ENST00000479161 OR8B12Q8NGG6 310 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms