RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 OR4F17Q8NGA8 305 aa3.48□□□□□ -1.85
VPS50-214ENST00000477935 RAB8BQ92930 207 aa3.48□□□□□ -1.85
VPS50-214ENST00000477935 YIPF5Q969M3 257 aa3.48□□□□□ -1.85
VPS50-214ENST00000477935 FAM162AQ96A26 154 aa3.48□□□□□ -1.85
VPS50-214ENST00000477935 EFHD2Q96C19 240 aaPredicted RBP3.48□□□□□ -1.85
VPS50-214ENST00000477935 RNF145Q96MT1 663 aa3.48□□□□□ -1.85
VPS50-214ENST00000477935 VSTM2LQ96N03 204 aa3.48□□□□□ -1.85
VPS50-214ENST00000477935 OR4F4Q96R69 305 aa3.48□□□□□ -1.85
VPS50-214ENST00000477935 DESI2Q9BSY9 194 aa3.48□□□□□ -1.85
VPS50-214ENST00000477935 SRXN1Q9BYN0 137 aa3.48□□□□□ -1.85
VPS50-214ENST00000477935 TPK1Q9H3S4 243 aa3.48□□□□□ -1.85
VPS50-214ENST00000477935 TMEM185BQ9H7F4 350 aa3.48□□□□□ -1.85
VPS50-214ENST00000477935 FBXO6Q9NRD1 293 aaPredicted RBP3.48□□□□□ -1.85
VPS50-214ENST00000477935 TAS2R9Q9NYW1 312 aa3.48□□□□□ -1.85
VPS50-214ENST00000477935 MAT2BQ9NZL9 334 aa3.48□□□□□ -1.85
VPS50-214ENST00000477935 HYOU1Q9Y4L1 999 aa3.48□□□□□ -1.85
VPS50-214ENST00000477935 INSIG2Q9Y5U4 225 aa3.48□□□□□ -1.85
VPS50-214ENST00000477935 A0A0A6YYD5 115 aa3.47□□□□□ -1.85
VPS50-214ENST00000477935 WI2-2373I1.2A0A1W2PRP0 233 aa3.47□□□□□ -1.85
VPS50-214ENST00000477935 C17orf51A8MQB3 221 aa3.47□□□□□ -1.85
VPS50-214ENST00000477935 CLDN25C9JDP6 229 aa3.47□□□□□ -1.85
VPS50-214ENST00000477935 C9JVG2 144 aa3.47□□□□□ -1.85
VPS50-214ENST00000477935 K7EQG2 157 aa3.47□□□□□ -1.85
VPS50-214ENST00000477935 SAP18O00422 153 aaKnown RBP3.47□□□□□ -1.85
VPS50-214ENST00000477935 PLPP1O14494 284 aa3.47□□□□□ -1.85
VPS50-214ENST00000477935 CTDSPLO15194 276 aa3.47□□□□□ -1.85
VPS50-214ENST00000477935 IGHV3-9P01782 118 aa3.47□□□□□ -1.85
VPS50-214ENST00000477935 IGHMP01871 453 aa3.47□□□□□ -1.85
VPS50-214ENST00000477935 FCGR2BP31994 310 aaPredicted RBP3.47□□□□□ -1.85
VPS50-214ENST00000477935 FCGR2CP31995 323 aa3.47□□□□□ -1.85
VPS50-214ENST00000477935 UBE2NP61088 152 aaKnown RBP3.47□□□□□ -1.85
VPS50-214ENST00000477935 UBE2HP62256 183 aa3.47□□□□□ -1.85
VPS50-214ENST00000477935 CDK16Q00536 496 aa3.47□□□□□ -1.85
VPS50-214ENST00000477935 IRF8Q02556 426 aa3.47□□□□□ -1.85
VPS50-214ENST00000477935 SCN1BQ07699 218 aa3.47□□□□□ -1.85
VPS50-214ENST00000477935 TRIP13Q15645 432 aaPredicted RBP3.47□□□□□ -1.85
VPS50-214ENST00000477935 MAPK11Q15759 364 aa3.47□□□□□ -1.85
VPS50-214ENST00000477935 HFEQ30201 348 aa3.47□□□□□ -1.85
VPS50-214ENST00000477935 DEFB112Q30KQ8 113 aa3.47□□□□□ -1.85
VPS50-214ENST00000477935 PLPPR5Q32ZL2 321 aa3.47□□□□□ -1.85
VPS50-214ENST00000477935 TRMT12Q53H54 448 aaKnown RBP3.47□□□□□ -1.85
VPS50-214ENST00000477935 LRRN1Q6UXK5 716 aa3.47□□□□□ -1.85
VPS50-214ENST00000477935 ABHD12BQ7Z5M8 362 aaPredicted RBP3.47□□□□□ -1.85
VPS50-214ENST00000477935 SPERTQ8NA61 448 aa3.47□□□□□ -1.85
VPS50-214ENST00000477935 CSNK1G2-AS1Q8NCQ2 148 aa3.47□□□□□ -1.85
VPS50-214ENST00000477935 OR7G3Q8NG95 312 aa3.47□□□□□ -1.85
VPS50-214ENST00000477935 ZNF675Q8TD23 568 aa3.47□□□□□ -1.85
VPS50-214ENST00000477935 ZFP90Q8TF47 636 aa3.47□□□□□ -1.85
VPS50-214ENST00000477935 UPRTQ96BW1 309 aa3.47□□□□□ -1.85
VPS50-214ENST00000477935 NAP1L3Q99457 506 aaPredicted RBP3.47□□□□□ -1.85
VPS50-214ENST00000477935 RBBP8Q99708 897 aa3.47□□□□□ -1.85
VPS50-214ENST00000477935 GAL3ST1Q99999 423 aa3.47□□□□□ -1.85
VPS50-214ENST00000477935 FRMD8P1Q9BZ68 369 aaPredicted RBP3.47□□□□□ -1.85
VPS50-214ENST00000477935 GPR61Q9BZJ8 451 aa3.47□□□□□ -1.85
VPS50-214ENST00000477935 OR51B5Q9H339 312 aa3.47□□□□□ -1.85
VPS50-214ENST00000477935 GOLPH3Q9H4A6 298 aa3.47□□□□□ -1.85
VPS50-214ENST00000477935 MOB1AQ9H8S9 216 aa3.47□□□□□ -1.85
VPS50-214ENST00000477935 MARCH7Q9H992 704 aa3.47□□□□□ -1.85
VPS50-214ENST00000477935 TMEM165Q9HC07 324 aa3.47□□□□□ -1.85
VPS50-214ENST00000477935 MMP26Q9NRE1 261 aa3.47□□□□□ -1.85
VPS50-214ENST00000477935 MED17Q9NVC6 651 aa3.47□□□□□ -1.85
VPS50-214ENST00000477935 AHSPQ9NZD4 102 aa3.47□□□□□ -1.85
VPS50-214ENST00000477935 LEF1Q9UJU2 399 aaPredicted RBP3.47□□□□□ -1.85
VPS50-214ENST00000477935 ZNF780BQ9Y6R6 833 aa3.47□□□□□ -1.85
VPS50-214ENST00000477935 FRAS1Q86XX4 4008 aa3.47□□□□□ -1.85
VPS50-214ENST00000477935 HECTD4Q9Y4D8 3996 aa3.46□□□□□ -1.85
VPS50-214ENST00000477935 ARPC4-TTLL3A0A0A6YYG9 625 aa3.46□□□□□ -1.86
VPS50-214ENST00000477935 A0A0B4J203 849 aa3.46□□□□□ -1.86
VPS50-214ENST00000477935 ZNF816-ZNF321PA0A0X1KG74 233 aa3.46□□□□□ -1.86
VPS50-214ENST00000477935 OR6C65A6NJZ3 312 aa3.46□□□□□ -1.86
VPS50-214ENST00000477935 ZNF732B4DXR9 585 aa3.46□□□□□ -1.86
VPS50-214ENST00000477935 RNASEK-C17orf49H0YIS7 233 aa3.46□□□□□ -1.86
VPS50-214ENST00000477935 TRAPPC2LH3BP13 241 aa3.46□□□□□ -1.86
VPS50-214ENST00000477935 ANGPTL7O43827 346 aa3.46□□□□□ -1.86
VPS50-214ENST00000477935 STK16O75716 305 aa3.46□□□□□ -1.86
VPS50-214ENST00000477935 IFNB1P01574 187 aa3.46□□□□□ -1.86
VPS50-214ENST00000477935 IGKV3-15P01624 115 aa3.46□□□□□ -1.86
VPS50-214ENST00000477935 IFNW1P05000 195 aa3.46□□□□□ -1.86
VPS50-214ENST00000477935 CECR9P0C854 216 aa3.46□□□□□ -1.86
VPS50-214ENST00000477935 CD1DP15813 335 aa3.46□□□□□ -1.86
VPS50-214ENST00000477935 CBR1P16152 277 aa3.46□□□□□ -1.86
VPS50-214ENST00000477935 TCN1P20061 433 aaPredicted RBP3.46□□□□□ -1.86
VPS50-214ENST00000477935 FKBP2P26885 142 aaKnown RBP3.46□□□□□ -1.86
VPS50-214ENST00000477935 CTNNA1P35221 906 aaKnown RBP3.46□□□□□ -1.86
VPS50-214ENST00000477935 GLRXP35754 106 aa3.46□□□□□ -1.86
VPS50-214ENST00000477935 ARR3P36575 388 aa3.46□□□□□ -1.86
VPS50-214ENST00000477935 TGFBR2P37173 567 aa3.46□□□□□ -1.86
VPS50-214ENST00000477935 SLC1A2P43004 574 aa3.46□□□□□ -1.86
VPS50-214ENST00000477935 RIDAP52758 137 aaKnown RBP3.46□□□□□ -1.86
VPS50-214ENST00000477935 CRYBA2P53672 197 aa3.46□□□□□ -1.86
VPS50-214ENST00000477935 RWDD2BP57060 319 aa3.46□□□□□ -1.86
VPS50-214ENST00000477935 RPS23P62266 143 aaKnown RBP3.46□□□□□ -1.86
VPS50-214ENST00000477935 EGFEM1PQ0D2K5 195 aa3.46□□□□□ -1.86
VPS50-214ENST00000477935 CHIT1Q13231 466 aa3.46□□□□□ -1.86
VPS50-214ENST00000477935 PDK4Q16654 411 aa3.46□□□□□ -1.86
VPS50-214ENST00000477935 AVPI1Q5T686 147 aa3.46□□□□□ -1.86
VPS50-214ENST00000477935 C9orf66Q5T8R8 295 aa3.46□□□□□ -1.86
VPS50-214ENST00000477935 SLC48A1Q6P1K1 146 aa3.46□□□□□ -1.86
VPS50-214ENST00000477935 SLC27A4Q6P1M0 643 aa3.46□□□□□ -1.86
VPS50-214ENST00000477935 REG3GQ6UW15 175 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms