RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 LRRC10Q5BKY1 277 aa5.84□□□□□ -1.47
SPTLC1-205ENST00000477888 ENTPD8Q5MY95 495 aa5.84□□□□□ -1.47
SPTLC1-205ENST00000477888 REEP3Q6NUK4 255 aa5.84□□□□□ -1.47
SPTLC1-205ENST00000477888 LHFPL4Q7Z7J7 247 aa5.84□□□□□ -1.47
SPTLC1-205ENST00000477888 KRT73Q86Y46 540 aa5.84□□□□□ -1.47
SPTLC1-205ENST00000477888 C11orf42Q8N5U0 333 aa5.84□□□□□ -1.47
SPTLC1-205ENST00000477888 ZNF781Q8N8C0 355 aa5.84□□□□□ -1.47
SPTLC1-205ENST00000477888 OR51D1Q8NGF3 324 aa5.84□□□□□ -1.47
SPTLC1-205ENST00000477888 OR4X2Q8NGF9 303 aa5.84□□□□□ -1.47
SPTLC1-205ENST00000477888 OR52H1Q8NGJ2 320 aa5.84□□□□□ -1.47
SPTLC1-205ENST00000477888 OR6T1Q8NGN1 323 aa5.84□□□□□ -1.47
SPTLC1-205ENST00000477888 NFKBIDQ8NI38 313 aa5.84□□□□□ -1.47
SPTLC1-205ENST00000477888 ADAMTS16Q8TE57 1224 aa5.84□□□□□ -1.47
SPTLC1-205ENST00000477888 H1FXQ92522 213 aaKnown RBP5.84□□□□□ -1.47
SPTLC1-205ENST00000477888 SEH1LQ96EE3 360 aa5.84□□□□□ -1.47
SPTLC1-205ENST00000477888 ARPC5LQ9BPX5 153 aa5.84□□□□□ -1.47
SPTLC1-205ENST00000477888 PRSS27Q9BQR3 290 aa5.84□□□□□ -1.47
SPTLC1-205ENST00000477888 SLC22A4Q9H015 551 aa5.84□□□□□ -1.47
SPTLC1-205ENST00000477888 IFT22Q9H7X7 185 aa5.84□□□□□ -1.47
SPTLC1-205ENST00000477888 AIG1Q9NVV5 245 aa5.84□□□□□ -1.47
SPTLC1-205ENST00000477888 SCOCQ9UIL1 159 aa5.84□□□□□ -1.47
SPTLC1-205ENST00000477888 PITPNC1Q9UKF7 332 aa5.84□□□□□ -1.47
SPTLC1-205ENST00000477888 SLC7A7Q9UM01 511 aa5.84□□□□□ -1.47
SPTLC1-205ENST00000477888 AURKCQ9UQB9 309 aa5.84□□□□□ -1.47
SPTLC1-205ENST00000477888 SMAD5-AS1Q9Y6J3 95 aa5.84□□□□□ -1.47
SPTLC1-205ENST00000477888 TRAPPC13A5PLN9 417 aa5.83□□□□□ -1.48
SPTLC1-205ENST00000477888 H0YAE9 185 aa5.83□□□□□ -1.48
SPTLC1-205ENST00000477888 CLIC1O00299 241 aa5.83□□□□□ -1.48
SPTLC1-205ENST00000477888 ITM2AO43736 263 aa5.83□□□□□ -1.48
SPTLC1-205ENST00000477888 SERPINB7O75635 380 aa5.83□□□□□ -1.48
SPTLC1-205ENST00000477888 RHBDL1O75783 438 aa5.83□□□□□ -1.48
SPTLC1-205ENST00000477888 OR7A10O76100 309 aa5.83□□□□□ -1.48
SPTLC1-205ENST00000477888 GRPP07492 148 aa5.83□□□□□ -1.48
SPTLC1-205ENST00000477888 ECI1P42126 302 aa5.83□□□□□ -1.48
SPTLC1-205ENST00000477888 GSK3BP49841 420 aa5.83□□□□□ -1.48
SPTLC1-205ENST00000477888 LUMP51884 338 aaPredicted RBP5.83□□□□□ -1.48
SPTLC1-205ENST00000477888 RPL27P61353 136 aaKnown RBP5.83□□□□□ -1.48
SPTLC1-205ENST00000477888 CDK6Q00534 326 aa5.83□□□□□ -1.48
SPTLC1-205ENST00000477888 ECH1Q13011 328 aa5.83□□□□□ -1.48
SPTLC1-205ENST00000477888 TOP3AQ13472 1001 aaPredicted RBP5.83□□□□□ -1.48
SPTLC1-205ENST00000477888 PCK2Q16822 640 aa5.83□□□□□ -1.48
SPTLC1-205ENST00000477888 DUSP7Q16829 419 aa5.83□□□□□ -1.48
SPTLC1-205ENST00000477888 DGUOKQ16854 277 aa5.83□□□□□ -1.48
SPTLC1-205ENST00000477888 KRTAP27-1Q3LI81 207 aa5.83□□□□□ -1.48
SPTLC1-205ENST00000477888 PLA1AQ53H76 456 aa5.83□□□□□ -1.48
SPTLC1-205ENST00000477888 LDLRAD2Q5SZI1 272 aa5.83□□□□□ -1.48
SPTLC1-205ENST00000477888 OTPQ5XKR4 325 aa5.83□□□□□ -1.48
SPTLC1-205ENST00000477888 KCTD18Q6PI47 426 aaPredicted RBP5.83□□□□□ -1.48
SPTLC1-205ENST00000477888 RBM45Q8IUH3 476 aaKnown RBP5.83□□□□□ -1.48
SPTLC1-205ENST00000477888 MKXQ8IYA7 352 aa5.83□□□□□ -1.48
SPTLC1-205ENST00000477888 GOLGA6L1Q8N7Z2 621 aa5.83□□□□□ -1.48
SPTLC1-205ENST00000477888 LRRC75AQ8NAA5 344 aa5.83□□□□□ -1.48
SPTLC1-205ENST00000477888 OR4D11Q8NGI4 311 aa5.83□□□□□ -1.48
SPTLC1-205ENST00000477888 OR9Q1Q8NGQ5 310 aa5.83□□□□□ -1.48
SPTLC1-205ENST00000477888 SVIPQ8NHG7 77 aa5.83□□□□□ -1.48
SPTLC1-205ENST00000477888 RPS4Y2Q8TD47 263 aa5.83□□□□□ -1.48
SPTLC1-205ENST00000477888 SPRYD4Q8WW59 207 aaPredicted RBP5.83□□□□□ -1.48
SPTLC1-205ENST00000477888 SLCO4A1Q96BD0 722 aa5.83□□□□□ -1.48
SPTLC1-205ENST00000477888 C12orf43Q96C57 262 aaKnown RBP5.83□□□□□ -1.48
SPTLC1-205ENST00000477888 ISOC1Q96CN7 298 aa5.83□□□□□ -1.48
SPTLC1-205ENST00000477888 ZNF649Q9BS31 505 aa5.83□□□□□ -1.48
SPTLC1-205ENST00000477888 TXLNGYQ9BZA5 131 aa5.83□□□□□ -1.48
SPTLC1-205ENST00000477888 C20orf27Q9GZN8 174 aa5.83□□□□□ -1.48
SPTLC1-205ENST00000477888 ZMAT4Q9H898 229 aa5.83□□□□□ -1.48
SPTLC1-205ENST00000477888 RNPEPL1Q9HAU8 725 aa5.83□□□□□ -1.48
SPTLC1-205ENST00000477888 ADA2Q9NZK5 511 aa5.83□□□□□ -1.48
SPTLC1-205ENST00000477888 VSX1Q9NZR4 365 aaPredicted RBP5.83□□□□□ -1.48
SPTLC1-205ENST00000477888 SLC13A4Q9UKG4 626 aa5.83□□□□□ -1.48
SPTLC1-205ENST00000477888 NOP16Q9Y3C1 178 aaKnown RBP5.83□□□□□ -1.48
SPTLC1-205ENST00000477888 A0A1W2PQ09 198 aa5.82□□□□□ -1.48
SPTLC1-205ENST00000477888 hCG_1807616A0A1W2PRN6 198 aa5.82□□□□□ -1.48
SPTLC1-205ENST00000477888 A6NLC8 198 aa5.82□□□□□ -1.48
SPTLC1-205ENST00000477888 CD300LBA8K4G0 201 aa5.82□□□□□ -1.48
SPTLC1-205ENST00000477888 FAM90A22PA8MWA6 464 aa5.82□□□□□ -1.48
SPTLC1-205ENST00000477888 RGS13O14921 159 aa5.82□□□□□ -1.48
SPTLC1-205ENST00000477888 GLCEO94923 617 aa5.82□□□□□ -1.48
SPTLC1-205ENST00000477888 SHBGP04278 402 aa5.82□□□□□ -1.48
SPTLC1-205ENST00000477888 HOXB9P17482 250 aaPredicted RBP5.82□□□□□ -1.48
SPTLC1-205ENST00000477888 DYNLT3P51808 116 aa5.82□□□□□ -1.48
SPTLC1-205ENST00000477888 GP2P55259 537 aaKnown RBP5.82□□□□□ -1.48
SPTLC1-205ENST00000477888 LGALS4P56470 323 aa5.82□□□□□ -1.48
SPTLC1-205ENST00000477888 CAV3P56539 151 aa5.82□□□□□ -1.48
SPTLC1-205ENST00000477888 LSM6P62312 80 aaKnown RBP5.82□□□□□ -1.48
SPTLC1-205ENST00000477888 RPL23AP62750 156 aaKnown RBP5.82□□□□□ -1.48
SPTLC1-205ENST00000477888 HIST1H3AP68431 136 aa5.82□□□□□ -1.48
SPTLC1-205ENST00000477888 ALG10Q5BKT4 473 aa5.82□□□□□ -1.48
SPTLC1-205ENST00000477888 KHDC1LQ5JSQ8 128 aa5.82□□□□□ -1.48
SPTLC1-205ENST00000477888 HIST2H3PS2Q5TEC6 136 aa5.82□□□□□ -1.48
SPTLC1-205ENST00000477888 STUMQ69YW2 141 aa5.82□□□□□ -1.48
SPTLC1-205ENST00000477888 ZNF788Q6ZQV5 615 aa5.82□□□□□ -1.48
SPTLC1-205ENST00000477888 C18orf65Q6ZTR6 163 aa5.82□□□□□ -1.48
SPTLC1-205ENST00000477888 C8orf86Q6ZUL3 223 aa5.82□□□□□ -1.48
SPTLC1-205ENST00000477888 HIST2H3AQ71DI3 136 aa5.82□□□□□ -1.48
SPTLC1-205ENST00000477888 PGAP1Q75T13 922 aa5.82□□□□□ -1.48
SPTLC1-205ENST00000477888 OVCH2Q7RTZ1 564 aa5.82□□□□□ -1.48
SPTLC1-205ENST00000477888 NAA40Q86UY6 237 aa5.82□□□□□ -1.48
SPTLC1-205ENST00000477888 ARMC8Q8IUR7 673 aa5.82□□□□□ -1.48
SPTLC1-205ENST00000477888 SMYD1Q8NB12 490 aa5.82□□□□□ -1.48
SPTLC1-205ENST00000477888 BVESQ8NE79 360 aa5.82□□□□□ -1.48
SPTLC1-205ENST00000477888 GPR32P1Q8NGA4 272 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms