RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 DMRTC1Q5HYR2 192 aa12.53□□□□□ -0.4
COL4A6-206ENST00000477085 TMEM53Q6P2H8 277 aa12.53□□□□□ -0.4
COL4A6-206ENST00000477085 PCSK4Q6UW60 755 aa12.53□□□□□ -0.4
COL4A6-206ENST00000477085 LGALS14Q8TCE9 139 aa12.53□□□□□ -0.4
COL4A6-206ENST00000477085 SLC25A28Q96A46 364 aa12.53□□□□□ -0.4
COL4A6-206ENST00000477085 REEP6Q96HR9 211 aa12.53□□□□□ -0.4
COL4A6-206ENST00000477085 TP63Q9H3D4 680 aaPredicted RBP12.53□□□□□ -0.4
COL4A6-206ENST00000477085 CYSLTR2Q9NS75 346 aa12.53□□□□□ -0.4
COL4A6-206ENST00000477085 CKLFQ9UBR5 152 aa12.53□□□□□ -0.4
COL4A6-206ENST00000477085 CGGBP1Q9UFW8 167 aaPredicted RBP12.53□□□□□ -0.4
COL4A6-206ENST00000477085 OR5V1Q9UGF6 321 aa12.53□□□□□ -0.4
COL4A6-206ENST00000477085 IGKV1-9A0A0C4DH69 117 aa12.53□□□□□ -0.4
COL4A6-206ENST00000477085 CIB4A0PJX0 185 aa12.53□□□□□ -0.4
COL4A6-206ENST00000477085 FABP12A6NFH5 140 aa12.53□□□□□ -0.4
COL4A6-206ENST00000477085 DHRS3O75911 302 aa12.53□□□□□ -0.4
COL4A6-206ENST00000477085 ZNF14P17017 642 aaPredicted RBP12.53□□□□□ -0.4
COL4A6-206ENST00000477085 CCNOP22674 350 aa12.53□□□□□ -0.4
COL4A6-206ENST00000477085 HOXD11P31277 338 aaPredicted RBP12.53□□□□□ -0.4
COL4A6-206ENST00000477085 GNALP38405 381 aa12.53□□□□□ -0.4
COL4A6-206ENST00000477085 TGFBR3Q03167 851 aa12.53□□□□□ -0.4
COL4A6-206ENST00000477085 P2RY14Q15391 338 aa12.53□□□□□ -0.4
COL4A6-206ENST00000477085 C16orf87Q6PH81 154 aa12.53□□□□□ -0.4
COL4A6-206ENST00000477085 OR5AS1Q8N127 324 aa12.53□□□□□ -0.4
COL4A6-206ENST00000477085 OR1M1Q8NGA1 313 aa12.53□□□□□ -0.4
COL4A6-206ENST00000477085 OR52N4Q8NGI2 321 aa12.53□□□□□ -0.4
COL4A6-206ENST00000477085 SRRQ9GZT4 340 aa12.53□□□□□ -0.4
COL4A6-206ENST00000477085 PPP1R3EQ9H7J1 279 aa12.53□□□□□ -0.4
COL4A6-206ENST00000477085 SPATA2Q9UM82 520 aa12.53□□□□□ -0.4
COL4A6-206ENST00000477085 A0A0G2JNJ9 132 aa12.52□□□□□ -0.41
COL4A6-206ENST00000477085 LOC390937A0A1W2PQ73 354 aa12.52□□□□□ -0.41
COL4A6-206ENST00000477085 NGFP01138 241 aa12.52□□□□□ -0.41
COL4A6-206ENST00000477085 SERPINA5P05154 406 aa12.52□□□□□ -0.41
COL4A6-206ENST00000477085 FAHP16930 419 aa12.52□□□□□ -0.41
COL4A6-206ENST00000477085 WNT5AP41221 380 aa12.52□□□□□ -0.41
COL4A6-206ENST00000477085 LY6DQ14210 128 aa12.52□□□□□ -0.41
COL4A6-206ENST00000477085 DPPA2Q7Z7J5 298 aa12.52□□□□□ -0.41
COL4A6-206ENST00000477085 OR4M1Q8NGD0 313 aa12.52□□□□□ -0.41
COL4A6-206ENST00000477085 OR5D14Q8NGL3 314 aa12.52□□□□□ -0.41
COL4A6-206ENST00000477085 OR13C9Q8NGT0 318 aa12.52□□□□□ -0.41
COL4A6-206ENST00000477085 SLC25A38Q96DW6 304 aa12.52□□□□□ -0.41
COL4A6-206ENST00000477085 ZFP3Q96NJ6 502 aa12.52□□□□□ -0.41
COL4A6-206ENST00000477085 KCNK15Q9H427 330 aa12.52□□□□□ -0.41
COL4A6-206ENST00000477085 Q9UFV3 132 aa12.52□□□□□ -0.41
COL4A6-206ENST00000477085 STEAP1Q9UHE8 339 aa12.52□□□□□ -0.41
COL4A6-206ENST00000477085 ZNF20P17024 532 aa12.51□□□□□ -0.41
COL4A6-206ENST00000477085 PSMD7P51665 324 aa12.51□□□□□ -0.41
COL4A6-206ENST00000477085 FAM3AP98173 230 aa12.51□□□□□ -0.41
COL4A6-206ENST00000477085 UBE2V2Q15819 145 aa12.51□□□□□ -0.41
COL4A6-206ENST00000477085 CRIP3Q6Q6R5 217 aa12.51□□□□□ -0.41
COL4A6-206ENST00000477085 FAM131AQ6UXB0 335 aa12.51□□□□□ -0.41
COL4A6-206ENST00000477085 BIVMQ86UB2 503 aa12.51□□□□□ -0.41
COL4A6-206ENST00000477085 LRRC28Q86X40 367 aaPredicted RBP12.51□□□□□ -0.41
COL4A6-206ENST00000477085 ZNF101Q8IZC7 436 aa12.51□□□□□ -0.41
COL4A6-206ENST00000477085 ZNF671Q8TAW3 534 aa12.51□□□□□ -0.41
COL4A6-206ENST00000477085 SPSB4Q96A44 273 aa12.51□□□□□ -0.41
COL4A6-206ENST00000477085 POFUT1Q9H488 388 aa12.51□□□□□ -0.41
COL4A6-206ENST00000477085 SH3BGRL2Q9UJC5 107 aa12.51□□□□□ -0.41
COL4A6-206ENST00000477085 PIGLQ9Y2B2 252 aa12.51□□□□□ -0.41
COL4A6-206ENST00000477085 STARD10Q9Y365 291 aa12.51□□□□□ -0.41
COL4A6-206ENST00000477085 MAP1BP46821 2468 aaKnown RBP12.51□□□□□ -0.41
COL4A6-206ENST00000477085 hCG_38984A0A1B0GV85 526 aa12.51□□□□□ -0.41
COL4A6-206ENST00000477085 FAM25AB3EWG3 89 aa12.51□□□□□ -0.41
COL4A6-206ENST00000477085 FAM25CB3EWG5 89 aa12.51□□□□□ -0.41
COL4A6-206ENST00000477085 FAM25GB3EWG6 89 aa12.51□□□□□ -0.41
COL4A6-206ENST00000477085 SLC17A2O00624 439 aa12.51□□□□□ -0.41
COL4A6-206ENST00000477085 AGFG2O95081 481 aa12.51□□□□□ -0.41
COL4A6-206ENST00000477085 AZGP1P25311 298 aaKnown RBP12.51□□□□□ -0.41
COL4A6-206ENST00000477085 BDKRB2P30411 391 aa12.51□□□□□ -0.41
COL4A6-206ENST00000477085 PLP2Q04941 152 aa12.51□□□□□ -0.41
COL4A6-206ENST00000477085 P2RY6Q15077 328 aa12.51□□□□□ -0.41
COL4A6-206ENST00000477085 BAK1Q16611 211 aa12.51□□□□□ -0.41
COL4A6-206ENST00000477085 BEND4Q6ZU67 534 aa12.51□□□□□ -0.41
COL4A6-206ENST00000477085 LIX1LQ8IVB5 337 aa12.51□□□□□ -0.41
COL4A6-206ENST00000477085 CMTM4Q8IZR5 234 aa12.51□□□□□ -0.41
COL4A6-206ENST00000477085 C1orf162Q8NEQ5 155 aaPredicted RBP12.51□□□□□ -0.41
COL4A6-206ENST00000477085 OR51D1Q8NGF3 324 aa12.51□□□□□ -0.41
COL4A6-206ENST00000477085 OR4D6Q8NGJ1 314 aa12.51□□□□□ -0.41
COL4A6-206ENST00000477085 NANOS1Q8WY41 292 aaKnown RBP12.51□□□□□ -0.41
COL4A6-206ENST00000477085 SFXN3Q9BWM7 321 aa12.51□□□□□ -0.41
COL4A6-206ENST00000477085 C1QTNF6Q9BXI9 259 aa12.51□□□□□ -0.41
COL4A6-206ENST00000477085 PALMDQ9NP74 551 aa12.51□□□□□ -0.41
COL4A6-206ENST00000477085 TMEM138Q9NPI0 162 aa12.51□□□□□ -0.41
COL4A6-206ENST00000477085 C14orf119Q9NWQ9 140 aa12.51□□□□□ -0.41
COL4A6-206ENST00000477085 EXTL2Q9UBQ6 330 aa12.51□□□□□ -0.41
COL4A6-206ENST00000477085 A0A0G2JMP0 313 aa12.5□□□□□ -0.41
COL4A6-206ENST00000477085 A0A0X1KG70 313 aa12.5□□□□□ -0.41
COL4A6-206ENST00000477085 MEGF11A6BM72 1044 aa12.5□□□□□ -0.41
COL4A6-206ENST00000477085 TMEM8BA6NDV4 472 aa12.5□□□□□ -0.41
COL4A6-206ENST00000477085 SULT1B1O43704 296 aa12.5□□□□□ -0.41
COL4A6-206ENST00000477085 UPK1BO75841 260 aa12.5□□□□□ -0.41
COL4A6-206ENST00000477085 CALCBP10092 127 aa12.5□□□□□ -0.41
COL4A6-206ENST00000477085 ZNF12P17014 697 aa12.5□□□□□ -0.41
COL4A6-206ENST00000477085 RAB3AP20336 220 aa12.5□□□□□ -0.41
COL4A6-206ENST00000477085 GSK3AP49840 483 aa12.5□□□□□ -0.41
COL4A6-206ENST00000477085 EFNB2P52799 333 aa12.5□□□□□ -0.41
COL4A6-206ENST00000477085 UBE2NP61088 152 aaKnown RBP12.5□□□□□ -0.41
COL4A6-206ENST00000477085 EIF2S3LQ2VIR3 472 aaKnown RBP12.5□□□□□ -0.41
COL4A6-206ENST00000477085 C2orf76Q3KRA6 126 aa12.5□□□□□ -0.41
COL4A6-206ENST00000477085 C1orf100Q5SVJ3 147 aa12.5□□□□□ -0.41
COL4A6-206ENST00000477085 GLT8D1Q68CQ7 371 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms