RNA–Protein interactions for RNA: ENST00000476395.1

VAPB-205, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-205ENST00000476395 GVQW1Q8N7I0 195 aa7.49□□□□□ -1.21
VAPB-205ENST00000476395 OR4K17Q8NGC6 315 aa7.49□□□□□ -1.21
VAPB-205ENST00000476395 OR51F2Q8NH61 342 aa7.49□□□□□ -1.21
VAPB-205ENST00000476395 OR10G6Q8NH81 332 aa7.49□□□□□ -1.21
VAPB-205ENST00000476395 ST7LQ8TDW4 575 aa7.49□□□□□ -1.21
VAPB-205ENST00000476395 RNF141Q8WVD5 230 aa7.49□□□□□ -1.21
VAPB-205ENST00000476395 NUDCD2Q8WVJ2 157 aa7.49□□□□□ -1.21
VAPB-205ENST00000476395 PHYHIPQ92561 330 aa7.49□□□□□ -1.21
VAPB-205ENST00000476395 C1orf198Q9H425 327 aa7.49□□□□□ -1.21
VAPB-205ENST00000476395 LPAR3Q9UBY5 353 aa7.49□□□□□ -1.21
VAPB-205ENST00000476395 WASF3Q9UPY6 502 aa7.49□□□□□ -1.21
VAPB-205ENST00000476395 YBX2Q9Y2T7 364 aaKnown RBP7.49□□□□□ -1.21
VAPB-205ENST00000476395 LINC01565O15544 149 aa7.48□□□□□ -1.21
VAPB-205ENST00000476395 MBTPS2O43462 519 aa7.48□□□□□ -1.21
VAPB-205ENST00000476395 PMS2P2O95744 297 aa7.48□□□□□ -1.21
VAPB-205ENST00000476395 PNPP00491 289 aa7.48□□□□□ -1.21
VAPB-205ENST00000476395 CD14P08571 375 aa7.48□□□□□ -1.21
VAPB-205ENST00000476395 AKR1C4P17516 323 aa7.48□□□□□ -1.21
VAPB-205ENST00000476395 GABRA4P48169 554 aa7.48□□□□□ -1.21
VAPB-205ENST00000476395 FHITP49789 147 aa7.48□□□□□ -1.21
VAPB-205ENST00000476395 CAV2P51636 162 aa7.48□□□□□ -1.21
VAPB-205ENST00000476395 TAS2R60P59551 318 aa7.48□□□□□ -1.21
VAPB-205ENST00000476395 CXADRP78310 365 aa7.48□□□□□ -1.21
VAPB-205ENST00000476395 SQSTM1Q13501 440 aa7.48□□□□□ -1.21
VAPB-205ENST00000476395 SLC22A25Q6T423 547 aa7.48□□□□□ -1.21
VAPB-205ENST00000476395 LRRC69Q6ZNQ3 347 aa7.48□□□□□ -1.21
VAPB-205ENST00000476395 MCEMP1Q8IX19 187 aa7.48□□□□□ -1.21
VAPB-205ENST00000476395 CDK20Q8IZL9 346 aa7.48□□□□□ -1.21
VAPB-205ENST00000476395 TMEM104Q8NE00 496 aa7.48□□□□□ -1.21
VAPB-205ENST00000476395 C16orf52Q8NHV5 167 aa7.48□□□□□ -1.21
VAPB-205ENST00000476395 CLUHP3Q96NS8 147 aa7.48□□□□□ -1.21
VAPB-205ENST00000476395 FOXN4Q96NZ1 517 aa7.48□□□□□ -1.21
VAPB-205ENST00000476395 CDC6Q99741 560 aa7.48□□□□□ -1.21
VAPB-205ENST00000476395 OCSTAMPQ9BR26 566 aa7.48□□□□□ -1.21
VAPB-205ENST00000476395 RNF126Q9BV68 326 aa7.48□□□□□ -1.21
VAPB-205ENST00000476395 MSRAQ9UJ68 235 aa7.48□□□□□ -1.21
VAPB-205ENST00000476395 ALG1L2C9J202 215 aa7.48□□□□□ -1.21
VAPB-205ENST00000476395 PHYHO14832 338 aa7.48□□□□□ -1.21
VAPB-205ENST00000476395 SRSF10O75494 262 aaKnown RBP7.48□□□□□ -1.21
VAPB-205ENST00000476395 ADAP1O75689 374 aa7.48□□□□□ -1.21
VAPB-205ENST00000476395 MT-ND4LP03901 98 aa7.48□□□□□ -1.21
VAPB-205ENST00000476395 RAB40ALP0C0E4 278 aa7.48□□□□□ -1.21
VAPB-205ENST00000476395 SLC25A4P12235 298 aa7.48□□□□□ -1.21
VAPB-205ENST00000476395 RAB6AP20340 208 aa7.48□□□□□ -1.21
VAPB-205ENST00000476395 SLC25A1P53007 311 aa7.48□□□□□ -1.21
VAPB-205ENST00000476395 Q499Y3 187 aa7.48□□□□□ -1.21
VAPB-205ENST00000476395 OR2A2Q6IF42 318 aa7.48□□□□□ -1.21
VAPB-205ENST00000476395 ZNF343Q6P1L6 599 aa7.48□□□□□ -1.21
VAPB-205ENST00000476395 LEG1Q6P5S2 330 aa7.48□□□□□ -1.21
VAPB-205ENST00000476395 RD3Q7Z3Z2 195 aa7.48□□□□□ -1.21
VAPB-205ENST00000476395 EID2Q8N6I1 236 aa7.48□□□□□ -1.21
VAPB-205ENST00000476395 RAB40AQ8WXH6 277 aa7.48□□□□□ -1.21
VAPB-205ENST00000476395 CMBLQ96DG6 245 aa7.48□□□□□ -1.21
VAPB-205ENST00000476395 RAB3CQ96E17 227 aa7.48□□□□□ -1.21
VAPB-205ENST00000476395 KTI12Q96EK9 354 aaPredicted RBP7.48□□□□□ -1.21
VAPB-205ENST00000476395 BSCL2Q96G97 398 aaPredicted RBP7.48□□□□□ -1.21
VAPB-205ENST00000476395 LPAR4Q99677 370 aa7.48□□□□□ -1.21
VAPB-205ENST00000476395 TCEAL7Q9BRU2 100 aa7.48□□□□□ -1.21
VAPB-205ENST00000476395 MMP25Q9NPA2 562 aa7.48□□□□□ -1.21
VAPB-205ENST00000476395 A0A087X0M5 115 aa7.48□□□□□ -1.21
VAPB-205ENST00000476395 A0A1B0GX30 115 aa7.48□□□□□ -1.21
VAPB-205ENST00000476395 ZNF727A8MUV8 499 aa7.48□□□□□ -1.21
VAPB-205ENST00000476395 CSF1P09603 554 aa7.48□□□□□ -1.21
VAPB-205ENST00000476395 ZNF735P0CB33 412 aa7.48□□□□□ -1.21
VAPB-205ENST00000476395 TPT1P13693 172 aaKnown RBP7.48□□□□□ -1.21
VAPB-205ENST00000476395 PI3P19957 117 aa7.48□□□□□ -1.21
VAPB-205ENST00000476395 ALOX5APP20292 161 aa7.48□□□□□ -1.21
VAPB-205ENST00000476395 FUT7Q11130 342 aa7.48□□□□□ -1.21
VAPB-205ENST00000476395 EBPQ15125 230 aaKnown RBP7.48□□□□□ -1.21
VAPB-205ENST00000476395 ZNF239Q16600 458 aaKnown RBP7.48□□□□□ -1.21
VAPB-205ENST00000476395 VWA2Q5GFL6 755 aa7.48□□□□□ -1.21
VAPB-205ENST00000476395 CDCP2Q5VXM1 449 aa7.48□□□□□ -1.21
VAPB-205ENST00000476395 RPL7L1Q6DKI1 246 aaKnown RBP7.48□□□□□ -1.21
VAPB-205ENST00000476395 SLC16A9Q7RTY1 509 aa7.48□□□□□ -1.21
VAPB-205ENST00000476395 GKN2Q86XP6 184 aa7.48□□□□□ -1.21
VAPB-205ENST00000476395 ZNF563Q8TA94 476 aa7.48□□□□□ -1.21
VAPB-205ENST00000476395 FAM174AQ8TBP5 190 aa7.48□□□□□ -1.21
VAPB-205ENST00000476395 NKD1Q969G9 470 aa7.48□□□□□ -1.21
VAPB-205ENST00000476395 TMEM106AQ96A25 262 aa7.48□□□□□ -1.21
VAPB-205ENST00000476395 KIRREL1Q96J84 757 aa7.48□□□□□ -1.21
VAPB-205ENST00000476395 ATG5Q9H1Y0 275 aa7.48□□□□□ -1.21
VAPB-205ENST00000476395 NKX2-4Q9H2Z4 354 aa7.48□□□□□ -1.21
VAPB-205ENST00000476395 C19orf12Q9NSK7 152 aa7.48□□□□□ -1.21
VAPB-205ENST00000476395 URGCP-MRPS24S4R325 110 aa7.48□□□□□ -1.21
VAPB-205ENST00000476395 TDRD6O60522 2096 aaKnown RBP7.47□□□□□ -1.21
VAPB-205ENST00000476395 TMEM235A6NFC5 223 aa7.47□□□□□ -1.21
VAPB-205ENST00000476395 SERINC4A6NH21 518 aa7.47□□□□□ -1.21
VAPB-205ENST00000476395 IFNGP01579 166 aa7.47□□□□□ -1.21
VAPB-205ENST00000476395 F13BP05160 661 aa7.47□□□□□ -1.21
VAPB-205ENST00000476395 PRSS3P35030 304 aa7.47□□□□□ -1.21
VAPB-205ENST00000476395 SERPINF1P36955 418 aa7.47□□□□□ -1.21
VAPB-205ENST00000476395 RIPPLY1Q0D2K3 151 aa7.47□□□□□ -1.21
VAPB-205ENST00000476395 KIAA0141Q14154 515 aaPredicted RBP7.47□□□□□ -1.21
VAPB-205ENST00000476395 PRTGQ2VWP7 1150 aa7.47□□□□□ -1.21
VAPB-205ENST00000476395 TCEAL6Q6IPX3 200 aa7.47□□□□□ -1.21
VAPB-205ENST00000476395 FDX2Q6P4F2 183 aa7.47□□□□□ -1.21
VAPB-205ENST00000476395 OGFOD3Q6PK18 319 aa7.47□□□□□ -1.21
VAPB-205ENST00000476395 BPIFB2Q8N4F0 458 aa7.47□□□□□ -1.21
VAPB-205ENST00000476395 CSNK1A1LQ8N752 337 aa7.47□□□□□ -1.21
VAPB-205ENST00000476395 UBAC2Q8NBM4 344 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms