RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 APH1BQ8WW43 257 aa3.64□□□□□ -1.83
SMC5-203ENST00000475540 FCRL1Q96LA6 429 aa3.64□□□□□ -1.83
SMC5-203ENST00000475540 ZFP3Q96NJ6 502 aa3.64□□□□□ -1.83
SMC5-203ENST00000475540 SERPINB11Q96P15 392 aa3.64□□□□□ -1.83
SMC5-203ENST00000475540 CIB1Q99828 191 aa3.64□□□□□ -1.83
SMC5-203ENST00000475540 IFI27L2Q9H2X8 130 aa3.64□□□□□ -1.83
SMC5-203ENST00000475540 SRMSQ9H3Y6 488 aa3.64□□□□□ -1.83
SMC5-203ENST00000475540 C1orf198Q9H425 327 aa3.64□□□□□ -1.83
SMC5-203ENST00000475540 RMND1Q9NWS8 449 aa3.64□□□□□ -1.83
SMC5-203ENST00000475540 SLC17A7Q9P2U7 560 aa3.64□□□□□ -1.83
SMC5-203ENST00000475540 CLCF1Q9UBD9 225 aa3.64□□□□□ -1.83
SMC5-203ENST00000475540 PSMD13Q9UNM6 376 aa3.64□□□□□ -1.83
SMC5-203ENST00000475540 URGCP-MRPS24S4R325 110 aa3.64□□□□□ -1.83
SMC5-203ENST00000475540 USP42Q9H9J4 1324 aaKnown RBP3.64□□□□□ -1.83
SMC5-203ENST00000475540 A0A1B0GTI1 187 aa3.63□□□□□ -1.83
SMC5-203ENST00000475540 H0YHG0 523 aa3.63□□□□□ -1.83
SMC5-203ENST00000475540 K7EMT4 169 aa3.63□□□□□ -1.83
SMC5-203ENST00000475540 ALOX12BO75342 701 aa3.63□□□□□ -1.83
SMC5-203ENST00000475540 C6orf47O95873 294 aa3.63□□□□□ -1.83
SMC5-203ENST00000475540 OR8U9P0C7N5 309 aa3.63□□□□□ -1.83
SMC5-203ENST00000475540 OCMP0CE72 109 aaPredicted RBP3.63□□□□□ -1.83
SMC5-203ENST00000475540 GKN3PP0CG01 181 aa3.63□□□□□ -1.83
SMC5-203ENST00000475540 PGAM1P18669 254 aa3.63□□□□□ -1.83
SMC5-203ENST00000475540 RANBP1P43487 201 aa3.63□□□□□ -1.83
SMC5-203ENST00000475540 AP1S2P56377 157 aa3.63□□□□□ -1.83
SMC5-203ENST00000475540 ZNF121P58317 390 aaPredicted RBP3.63□□□□□ -1.83
SMC5-203ENST00000475540 ST3GAL4Q11206 333 aa3.63□□□□□ -1.83
SMC5-203ENST00000475540 SLAMF1Q13291 335 aa3.63□□□□□ -1.83
SMC5-203ENST00000475540 MAD2L1BPQ15013 274 aaPredicted RBP3.63□□□□□ -1.83
SMC5-203ENST00000475540 TAL2Q16559 108 aa3.63□□□□□ -1.83
SMC5-203ENST00000475540 C5orf47Q569G3 176 aa3.63□□□□□ -1.83
SMC5-203ENST00000475540 CPTPQ5TA50 214 aa3.63□□□□□ -1.83
SMC5-203ENST00000475540 ANKRD22Q5VYY1 191 aa3.63□□□□□ -1.83
SMC5-203ENST00000475540 PTRHD1Q6GMV3 140 aaKnown RBP3.63□□□□□ -1.83
SMC5-203ENST00000475540 THOC6Q86W42 341 aaKnown RBP3.63□□□□□ -1.83
SMC5-203ENST00000475540 PLCZ1Q86YW0 608 aa3.63□□□□□ -1.83
SMC5-203ENST00000475540 CBLN2Q8IUK8 224 aa3.63□□□□□ -1.83
SMC5-203ENST00000475540 NKAIN4Q8IVV8 208 aa3.63□□□□□ -1.83
SMC5-203ENST00000475540 TMEM61Q8N0U2 210 aa3.63□□□□□ -1.83
SMC5-203ENST00000475540 CBR4Q8N4T8 237 aa3.63□□□□□ -1.83
SMC5-203ENST00000475540 CDRT4Q8N9R6 151 aa3.63□□□□□ -1.83
SMC5-203ENST00000475540 DNAAF3Q8N9W5 541 aa3.63□□□□□ -1.83
SMC5-203ENST00000475540 WDR31Q8NA23 367 aa3.63□□□□□ -1.83
SMC5-203ENST00000475540 OR6Q1Q8NGQ2 317 aa3.63□□□□□ -1.83
SMC5-203ENST00000475540 OR8U1Q8NH10 309 aa3.63□□□□□ -1.83
SMC5-203ENST00000475540 OR51A7Q8NH64 312 aa3.63□□□□□ -1.83
SMC5-203ENST00000475540 DYNLL2Q96FJ2 89 aa3.63□□□□□ -1.83
SMC5-203ENST00000475540 ZNF514Q96K75 400 aaPredicted RBP3.63□□□□□ -1.83
SMC5-203ENST00000475540 SCGB3A2Q96PL1 93 aa3.63□□□□□ -1.83
SMC5-203ENST00000475540 RTBDNQ9BSG5 229 aaPredicted RBP3.63□□□□□ -1.83
SMC5-203ENST00000475540 COPS4Q9BT78 406 aa3.63□□□□□ -1.83
SMC5-203ENST00000475540 RSPO3Q9BXY4 272 aaPredicted RBP3.63□□□□□ -1.83
SMC5-203ENST00000475540 SLC39A1Q9NY26 324 aa3.63□□□□□ -1.83
SMC5-203ENST00000475540 TSSC4Q9Y5U2 329 aaPredicted RBP3.63□□□□□ -1.83
SMC5-203ENST00000475540 PUS1Q9Y606 427 aaKnown RBP eCLIP3.63□□□□□ -1.83
SMC5-203ENST00000475540 KCNE3Q9Y6H6 103 aa3.63□□□□□ -1.83
SMC5-203ENST00000475540 ITGB1BP1O14713 200 aa3.62□□□□□ -1.83
SMC5-203ENST00000475540 RAD51BO15315 384 aa3.62□□□□□ -1.83
SMC5-203ENST00000475540 SLC31A2O15432 143 aa3.62□□□□□ -1.83
SMC5-203ENST00000475540 CSF3P09919 207 aa3.62□□□□□ -1.83
SMC5-203ENST00000475540 TDGF1P13385 188 aa3.62□□□□□ -1.83
SMC5-203ENST00000475540 IGFBP3P17936 291 aaPredicted RBP3.62□□□□□ -1.83
SMC5-203ENST00000475540 GGT1P19440 569 aa3.62□□□□□ -1.83
SMC5-203ENST00000475540 BTCP35070 178 aa3.62□□□□□ -1.83
SMC5-203ENST00000475540 MAS1LP35410 378 aa3.62□□□□□ -1.83
SMC5-203ENST00000475540 PRLHRP49683 370 aa3.62□□□□□ -1.83
SMC5-203ENST00000475540 RAB7AP51149 207 aa3.62□□□□□ -1.83
SMC5-203ENST00000475540 FABP6P51161 128 aa3.62□□□□□ -1.83
SMC5-203ENST00000475540 TDGF1P3P51864 188 aa3.62□□□□□ -1.83
SMC5-203ENST00000475540 CRISP3P54108 245 aa3.62□□□□□ -1.83
SMC5-203ENST00000475540 PLTPP55058 493 aa3.62□□□□□ -1.83
SMC5-203ENST00000475540 C2orf80Q0P641 193 aa3.62□□□□□ -1.83
SMC5-203ENST00000475540 FZD2Q14332 565 aa3.62□□□□□ -1.83
SMC5-203ENST00000475540 PRPSAP1Q14558 356 aa3.62□□□□□ -1.83
SMC5-203ENST00000475540 OR4D1Q15615 310 aa3.62□□□□□ -1.83
SMC5-203ENST00000475540 DEFB116Q30KQ4 102 aa3.62□□□□□ -1.83
SMC5-203ENST00000475540 MRPL55Q7Z7F7 128 aaKnown RBP3.62□□□□□ -1.83
SMC5-203ENST00000475540 SETD3Q86TU7 594 aaPredicted RBP3.62□□□□□ -1.83
SMC5-203ENST00000475540 OR52E2Q8NGJ4 325 aa3.62□□□□□ -1.83
SMC5-203ENST00000475540 OR51E1Q8TCB6 317 aa3.62□□□□□ -1.83
SMC5-203ENST00000475540 GEMIN6Q8WXD5 167 aaKnown RBP3.62□□□□□ -1.83
SMC5-203ENST00000475540 COL21A1Q96P44 957 aa3.62□□□□□ -1.83
SMC5-203ENST00000475540 TSNAXQ99598 290 aaKnown RBP3.62□□□□□ -1.83
SMC5-203ENST00000475540 ZNF251Q9BRH9 671 aa3.62□□□□□ -1.83
SMC5-203ENST00000475540 UPF3BQ9BZI7 483 aaKnown RBP3.62□□□□□ -1.83
SMC5-203ENST00000475540 PORCNQ9H237 461 aa3.62□□□□□ -1.83
SMC5-203ENST00000475540 LHX9Q9NQ69 397 aa3.62□□□□□ -1.83
SMC5-203ENST00000475540 ST3GAL6Q9Y274 331 aa3.62□□□□□ -1.83
SMC5-203ENST00000475540 TRAPPC4Q9Y296 219 aa3.62□□□□□ -1.83
SMC5-203ENST00000475540 TRAV8-7A0A075B6U6 113 aa3.61□□□□□ -1.83
SMC5-203ENST00000475540 TMEM213A2RRL7 107 aa3.61□□□□□ -1.83
SMC5-203ENST00000475540 TVP23AA6NH52 213 aa3.61□□□□□ -1.83
SMC5-203ENST00000475540 NCBP2LA6PVI3 153 aaKnown RBP3.61□□□□□ -1.83
SMC5-203ENST00000475540 ANKRD65E5RJM6 399 aa3.61□□□□□ -1.83
SMC5-203ENST00000475540 H3BNH8 94 aa3.61□□□□□ -1.83
SMC5-203ENST00000475540 MKRN2OSH3BPM6 223 aa3.61□□□□□ -1.83
SMC5-203ENST00000475540 hCG_2039718K7EN88 272 aa3.61□□□□□ -1.83
SMC5-203ENST00000475540 DFFAO00273 331 aa3.61□□□□□ -1.83
SMC5-203ENST00000475540 KLHL2O95198 593 aa3.61□□□□□ -1.83
SMC5-203ENST00000475540 UTS2O95399 124 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms