RNA–Protein interactions for RNA: ENST00000475506.1

SDHB-205, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 2

Gene SDHB, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-205ENST00000475506 TSSC4Q9Y5U2 329 aaPredicted RBP3.62□□□□□ -1.83
SDHB-205ENST00000475506 SMARCA2P51531 1590 aa3.62□□□□□ -1.83
SDHB-205ENST00000475506 EIF4G1Q04637 1599 aaKnown RBP3.62□□□□□ -1.83
SDHB-205ENST00000475506 PEG3Q9GZU2 1588 aa3.62□□□□□ -1.83
SDHB-205ENST00000475506 PALLDQ8WX93 1383 aa3.62□□□□□ -1.83
SDHB-205ENST00000475506 RB1CC1Q8TDY2 1594 aa3.61□□□□□ -1.83
SDHB-205ENST00000475506 IGHV5-51A0A0C4DH38 117 aa3.61□□□□□ -1.83
SDHB-205ENST00000475506 DFFAO00273 331 aa3.61□□□□□ -1.83
SDHB-205ENST00000475506 PRMT5O14744 637 aaPredicted RBP3.61□□□□□ -1.83
SDHB-205ENST00000475506 SMC2O95347 1197 aa3.61□□□□□ -1.83
SDHB-205ENST00000475506 BGNP21810 368 aa3.61□□□□□ -1.83
SDHB-205ENST00000475506 GNRHRP30968 328 aa3.61□□□□□ -1.83
SDHB-205ENST00000475506 RBM34P42696 430 aaKnown RBP3.61□□□□□ -1.83
SDHB-205ENST00000475506 GTF2A1P52655 376 aaPredicted RBP3.61□□□□□ -1.83
SDHB-205ENST00000475506 RPL31P62899 125 aaKnown RBP3.61□□□□□ -1.83
SDHB-205ENST00000475506 MAD2L1BPQ15013 274 aaPredicted RBP3.61□□□□□ -1.83
SDHB-205ENST00000475506 CPTPQ5TA50 214 aa3.61□□□□□ -1.83
SDHB-205ENST00000475506 DUPD1Q68J44 220 aa3.61□□□□□ -1.83
SDHB-205ENST00000475506 EPGNQ6UW88 154 aa3.61□□□□□ -1.83
SDHB-205ENST00000475506 PCP2Q8IVA1 136 aa3.61□□□□□ -1.83
SDHB-205ENST00000475506 C12orf56Q8IXR9 622 aa3.61□□□□□ -1.83
SDHB-205ENST00000475506 SPAG16Q8N0X2 631 aa3.61□□□□□ -1.83
SDHB-205ENST00000475506 OR6K6Q8NGW6 343 aa3.61□□□□□ -1.83
SDHB-205ENST00000475506 PIFOQ8TCI5 191 aa3.61□□□□□ -1.83
SDHB-205ENST00000475506 ABHD3Q8WU67 409 aa3.61□□□□□ -1.83
SDHB-205ENST00000475506 ZBED3Q96IU2 234 aaPredicted RBP3.61□□□□□ -1.83
SDHB-205ENST00000475506 FAM210BQ96KR6 192 aa3.61□□□□□ -1.83
SDHB-205ENST00000475506 FRMD8P1Q9BZ68 369 aaPredicted RBP3.61□□□□□ -1.83
SDHB-205ENST00000475506 SYT4Q9H2B2 425 aa3.61□□□□□ -1.83
SDHB-205ENST00000475506 MYOZ1Q9NP98 299 aaPredicted RBP3.61□□□□□ -1.83
SDHB-205ENST00000475506 CARMIL3Q8ND23 1372 aa3.61□□□□□ -1.83
SDHB-205ENST00000475506 TRBV6-6A0A0A6YYG2 114 aa3.6□□□□□ -1.83
SDHB-205ENST00000475506 OR6C74A6NCV1 312 aa3.6□□□□□ -1.83
SDHB-205ENST00000475506 LOXP28300 417 aaPredicted RBP3.6□□□□□ -1.83
SDHB-205ENST00000475506 SSTR5P35346 364 aa3.6□□□□□ -1.83
SDHB-205ENST00000475506 SYNJ2BPP57105 145 aa3.6□□□□□ -1.83
SDHB-205ENST00000475506 IFFO1Q0D2I5 559 aa3.6□□□□□ -1.83
SDHB-205ENST00000475506 ERCC8Q13216 396 aa3.6□□□□□ -1.83
SDHB-205ENST00000475506 MPPED2Q15777 294 aa3.6□□□□□ -1.83
SDHB-205ENST00000475506 TAL2Q16559 108 aa3.6□□□□□ -1.83
SDHB-205ENST00000475506 ORMDL2Q53FV1 153 aa3.6□□□□□ -1.83
SDHB-205ENST00000475506 FBXW9Q5XUX1 488 aa3.6□□□□□ -1.83
SDHB-205ENST00000475506 CYB5R2Q6BCY4 276 aa3.6□□□□□ -1.83
SDHB-205ENST00000475506 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.6□□□□□ -1.83
SDHB-205ENST00000475506 ZNF530Q6P9A1 599 aaPredicted RBP3.6□□□□□ -1.83
SDHB-205ENST00000475506 NKAIN4Q8IVV8 208 aa3.6□□□□□ -1.83
SDHB-205ENST00000475506 ARIH2OSQ8N7S6 290 aa3.6□□□□□ -1.83
SDHB-205ENST00000475506 OR6N2Q8NGY6 317 aa3.6□□□□□ -1.83
SDHB-205ENST00000475506 LGALS14Q8TCE9 139 aa3.6□□□□□ -1.83
SDHB-205ENST00000475506 TMEM234Q8WY98 164 aa3.6□□□□□ -1.83
SDHB-205ENST00000475506 DCPSQ96C86 337 aaKnown RBP3.6□□□□□ -1.83
SDHB-205ENST00000475506 HAUS1Q96CS2 278 aa3.6□□□□□ -1.83
SDHB-205ENST00000475506 ZNF799Q96GE5 643 aa3.6□□□□□ -1.83
SDHB-205ENST00000475506 CEP170P1Q96L14 293 aa3.6□□□□□ -1.83
SDHB-205ENST00000475506 ATP6V1G3Q96LB4 118 aa3.6□□□□□ -1.83
SDHB-205ENST00000475506 BMFQ96LC9 184 aa3.6□□□□□ -1.83
SDHB-205ENST00000475506 TIMM17AQ99595 171 aa3.6□□□□□ -1.83
SDHB-205ENST00000475506 KCNS3Q9BQ31 491 aa3.6□□□□□ -1.83
SDHB-205ENST00000475506 TMEM27Q9HBJ8 222 aa3.6□□□□□ -1.83
SDHB-205ENST00000475506 NRBP2Q9NSY0 501 aa3.6□□□□□ -1.83
SDHB-205ENST00000475506 CHMP5Q9NZZ3 219 aa3.6□□□□□ -1.83
SDHB-205ENST00000475506 CTSFQ9UBX1 484 aa3.6□□□□□ -1.83
SDHB-205ENST00000475506 KTN1Q86UP2 1357 aaKnown RBP3.6□□□□□ -1.83
SDHB-205ENST00000475506 CDC42BPBQ9Y5S2 1711 aa3.59□□□□□ -1.83
SDHB-205ENST00000475506 TRAV8-7A0A075B6U6 113 aa3.59□□□□□ -1.83
SDHB-205ENST00000475506 IGHV1-69DA0A0B4J2H0 117 aa3.59□□□□□ -1.83
SDHB-205ENST00000475506 A0A1B0GW15 77 aa3.59□□□□□ -1.83
SDHB-205ENST00000475506 KLLNB2CW77 178 aa3.59□□□□□ -1.83
SDHB-205ENST00000475506 LINC01619G3V211 115 aa3.59□□□□□ -1.83
SDHB-205ENST00000475506 H0Y9J4 135 aa3.59□□□□□ -1.83
SDHB-205ENST00000475506 DNASE2O00115 360 aaPredicted RBP3.59□□□□□ -1.83
SDHB-205ENST00000475506 CDC40O60508 579 aaKnown RBP eCLIP3.59□□□□□ -1.83
SDHB-205ENST00000475506 ALOX12BO75342 701 aa3.59□□□□□ -1.83
SDHB-205ENST00000475506 POLR2IP36954 125 aaKnown RBP3.59□□□□□ -1.83
SDHB-205ENST00000475506 KIR3DL2P43630 455 aa3.59□□□□□ -1.83
SDHB-205ENST00000475506 MLF1P58340 268 aa3.59□□□□□ -1.83
SDHB-205ENST00000475506 TAS2R46P59540 309 aa3.59□□□□□ -1.83
SDHB-205ENST00000475506 DYNC1I2Q13409 638 aaKnown RBP3.59□□□□□ -1.83
SDHB-205ENST00000475506 RBMY1FQ15415 496 aaKnown RBP3.59□□□□□ -1.83
SDHB-205ENST00000475506 OR1Q1Q15612 314 aa3.59□□□□□ -1.83
SDHB-205ENST00000475506 PSG3Q16557 428 aa3.59□□□□□ -1.83
SDHB-205ENST00000475506 AVPI1Q5T686 147 aa3.59□□□□□ -1.83
SDHB-205ENST00000475506 OR2A5Q96R48 311 aa3.59□□□□□ -1.83
SDHB-205ENST00000475506 PAIP2Q9BPZ3 127 aaKnown RBP3.59□□□□□ -1.83
SDHB-205ENST00000475506 ARV1Q9H2C2 271 aa3.59□□□□□ -1.83
SDHB-205ENST00000475506 OR51B5Q9H339 312 aa3.59□□□□□ -1.83
SDHB-205ENST00000475506 C12orf10Q9HB07 376 aa3.59□□□□□ -1.83
SDHB-205ENST00000475506 RBFOX1Q9NWB1 397 aaKnown RBP3.59□□□□□ -1.83
SDHB-205ENST00000475506 HYOU1Q9Y4L1 999 aa3.59□□□□□ -1.83
SDHB-205ENST00000475506 CLIP1P30622 1438 aa3.59□□□□□ -1.84
SDHB-205ENST00000475506 GOLGA3Q08378 1498 aa3.59□□□□□ -1.84
SDHB-205ENST00000475506 C2orf16Q68DN1 1984 aa3.58□□□□□ -1.84
SDHB-205ENST00000475506 IGKV1-27A0A075B6S5 117 aa3.58□□□□□ -1.84
SDHB-205ENST00000475506 GOLGA8QA0A0J9YX86 632 aa3.58□□□□□ -1.84
SDHB-205ENST00000475506 WI2-2373I1.2A0A1W2PRP0 233 aa3.58□□□□□ -1.84
SDHB-205ENST00000475506 ANKRD20A5PA0PJZ0 165 aa3.58□□□□□ -1.84
SDHB-205ENST00000475506 IQCF5A8MTL0 148 aa3.58□□□□□ -1.84
SDHB-205ENST00000475506 POLR3GO15318 223 aaPredicted RBP3.58□□□□□ -1.84
SDHB-205ENST00000475506 ZMPSTE24O75844 475 aa3.58□□□□□ -1.84
SDHB-205ENST00000475506 SEMA3DO95025 777 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms