RNA–Protein interactions for RNA: ENST00000473598.6

LMNA-213, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 2,015 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-213ENST00000473598 MIOXQ9UGB7 285 aa13.08□□□□□ -0.32
LMNA-213ENST00000473598 TUBD1Q9UJT1 453 aa13.08□□□□□ -0.32
LMNA-213ENST00000473598 IGLV1-36A0A0B4J1U3 117 aa13.07□□□□□ -0.32
LMNA-213ENST00000473598 A0A1B0GVC2 190 aa13.07□□□□□ -0.32
LMNA-213ENST00000473598 PLSCR5A0PG75 271 aa13.07□□□□□ -0.32
LMNA-213ENST00000473598 ZNF726A6NNF4 738 aa13.07□□□□□ -0.32
LMNA-213ENST00000473598 ZNF716A6NP11 495 aa13.07□□□□□ -0.32
LMNA-213ENST00000473598 GABRPO00591 440 aa13.07□□□□□ -0.32
LMNA-213ENST00000473598 CYTIPO60759 359 aa13.07□□□□□ -0.32
LMNA-213ENST00000473598 IGHG1P01857 330 aa13.07□□□□□ -0.32
LMNA-213ENST00000473598 SNTB1Q13884 538 aaKnown RBP13.07□□□□□ -0.32
LMNA-213ENST00000473598 LYPD4Q6UWN0 246 aa13.07□□□□□ -0.32
LMNA-213ENST00000473598 NOXO1Q8NFA2 376 aa13.07□□□□□ -0.32
LMNA-213ENST00000473598 EDARADDQ8WWZ3 215 aa13.07□□□□□ -0.32
LMNA-213ENST00000473598 RFT1Q96AA3 541 aa13.07□□□□□ -0.32
LMNA-213ENST00000473598 WDYHV1Q96HA8 205 aa13.07□□□□□ -0.32
LMNA-213ENST00000473598 TMEM68Q96MH6 324 aa13.07□□□□□ -0.32
LMNA-213ENST00000473598 ZNF385AQ96PM9 386 aaKnown RBP13.07□□□□□ -0.32
LMNA-213ENST00000473598 SLC25A18Q9H1K4 315 aa13.07□□□□□ -0.32
LMNA-213ENST00000473598 TRIM36Q9NQ86 728 aa13.07□□□□□ -0.32
LMNA-213ENST00000473598 SIRT4Q9Y6E7 314 aaPredicted RBP13.07□□□□□ -0.32
LMNA-213ENST00000473598 ATXN7O15265 892 aaPredicted RBP13.06□□□□□ -0.32
LMNA-213ENST00000473598 KDM4BO94953 1096 aa13.06□□□□□ -0.32
LMNA-213ENST00000473598 TFP02787 698 aa13.06□□□□□ -0.32
LMNA-213ENST00000473598 MT-ND5P03915 603 aa13.06□□□□□ -0.32
LMNA-213ENST00000473598 PRB1P04280 392 aa13.06□□□□□ -0.32
LMNA-213ENST00000473598 NAA10P41227 235 aaPredicted RBP13.06□□□□□ -0.32
LMNA-213ENST00000473598 CLRN1P58418 232 aa13.06□□□□□ -0.32
LMNA-213ENST00000473598 ACTC1P68032 377 aa13.06□□□□□ -0.32
LMNA-213ENST00000473598 ACTA1P68133 377 aa13.06□□□□□ -0.32
LMNA-213ENST00000473598 ZNF85Q03923 595 aa13.06□□□□□ -0.32
LMNA-213ENST00000473598 PLEKHN1Q494U1 663 aaPredicted RBP13.06□□□□□ -0.32
LMNA-213ENST00000473598 AVPI1Q5T686 147 aa13.06□□□□□ -0.32
LMNA-213ENST00000473598 DNM1P34Q6PK57 102 aa13.06□□□□□ -0.32
LMNA-213ENST00000473598 SEZ6L2Q6UXD5 910 aa13.06□□□□□ -0.32
LMNA-213ENST00000473598 TMEM91Q6ZNR0 172 aa13.06□□□□□ -0.32
LMNA-213ENST00000473598 SIAH3Q8IW03 269 aa13.06□□□□□ -0.32
LMNA-213ENST00000473598 ZIC4Q8N9L1 334 aa13.06□□□□□ -0.32
LMNA-213ENST00000473598 ZNF511Q8NB15 262 aa13.06□□□□□ -0.32
LMNA-213ENST00000473598 ATF6BQ99941 703 aa13.06□□□□□ -0.32
LMNA-213ENST00000473598 ACTR6Q9GZN1 396 aa13.06□□□□□ -0.32
LMNA-213ENST00000473598 ABCG5Q9H222 651 aa13.06□□□□□ -0.32
LMNA-213ENST00000473598 SEBOXQ9HB31 216 aaPredicted RBP13.06□□□□□ -0.32
LMNA-213ENST00000473598 TTLL8A6PVC2 850 aa13.06□□□□□ -0.32
LMNA-213ENST00000473598 RP2O75695 350 aa13.06□□□□□ -0.32
LMNA-213ENST00000473598 SYNGR4O95473 234 aa13.06□□□□□ -0.32
LMNA-213ENST00000473598 TCRBP04435 133 aa13.06□□□□□ -0.32
LMNA-213ENST00000473598 OR2T7P0C7T2 308 aa13.06□□□□□ -0.32
LMNA-213ENST00000473598 FMODQ06828 376 aa13.06□□□□□ -0.32
LMNA-213ENST00000473598 INSL4Q14641 139 aa13.06□□□□□ -0.32
LMNA-213ENST00000473598 C3AR1Q16581 482 aa13.06□□□□□ -0.32
LMNA-213ENST00000473598 HIST3H3Q16695 136 aa13.06□□□□□ -0.32
LMNA-213ENST00000473598 RNF212Q495C1 297 aa13.06□□□□□ -0.32
LMNA-213ENST00000473598 THEM4Q5T1C6 240 aa13.06□□□□□ -0.32
LMNA-213ENST00000473598 OR2T27Q8NH04 317 aa13.06□□□□□ -0.32
LMNA-213ENST00000473598 SMAP2Q8WU79 429 aaPredicted RBP13.06□□□□□ -0.32
LMNA-213ENST00000473598 PLSCR2Q9NRY7 297 aa13.06□□□□□ -0.32
LMNA-213ENST00000473598 LUZP4Q9P127 313 aa13.06□□□□□ -0.32
LMNA-213ENST00000473598 MCTS1Q9ULC4 181 aaKnown RBP13.06□□□□□ -0.32
LMNA-213ENST00000473598 FLVCR1Q9Y5Y0 555 aa13.06□□□□□ -0.32
LMNA-213ENST00000473598 ANXA2P2A6NMY6 339 aa13.05□□□□□ -0.32
LMNA-213ENST00000473598 AQP7O14520 342 aa13.05□□□□□ -0.32
LMNA-213ENST00000473598 WISP2O76076 250 aa13.05□□□□□ -0.32
LMNA-213ENST00000473598 RGS11O94810 467 aa13.05□□□□□ -0.32
LMNA-213ENST00000473598 GPANK1O95872 356 aa13.05□□□□□ -0.32
LMNA-213ENST00000473598 CXCL2P19875 107 aa13.05□□□□□ -0.32
LMNA-213ENST00000473598 HCCSP53701 268 aa13.05□□□□□ -0.32
LMNA-213ENST00000473598 RASGEF1BQ0VAM2 473 aa13.05□□□□□ -0.32
LMNA-213ENST00000473598 MADCAM1Q13477 382 aa13.05□□□□□ -0.32
LMNA-213ENST00000473598 GK2Q14410 553 aaPredicted RBP13.05□□□□□ -0.32
LMNA-213ENST00000473598 GSG1Q2KHT4 349 aa13.05□□□□□ -0.32
LMNA-213ENST00000473598 CARD17Q5XLA6 110 aa13.05□□□□□ -0.32
LMNA-213ENST00000473598 DHRS7BQ6IAN0 325 aaPredicted RBP13.05□□□□□ -0.32
LMNA-213ENST00000473598 SLC16A9Q7RTY1 509 aa13.05□□□□□ -0.32
LMNA-213ENST00000473598 SKA3Q8IX90 412 aa13.05□□□□□ -0.32
LMNA-213ENST00000473598 SLC35F2Q8IXU6 374 aa13.05□□□□□ -0.32
LMNA-213ENST00000473598 OR5M9Q8NGP3 310 aa13.05□□□□□ -0.32
LMNA-213ENST00000473598 RNF128Q8TEB7 428 aa13.05□□□□□ -0.32
LMNA-213ENST00000473598 ELMOD3Q96FG2 381 aa13.05□□□□□ -0.32
LMNA-213ENST00000473598 COA3Q9Y2R0 106 aaPredicted RBP13.05□□□□□ -0.32
LMNA-213ENST00000473598 IGKV1D-43A0A0B4J1Z2 117 aa13.05□□□□□ -0.32
LMNA-213ENST00000473598 SHISA3A0PJX4 238 aa13.05□□□□□ -0.32
LMNA-213ENST00000473598 TVP23AA6NH52 213 aa13.05□□□□□ -0.32
LMNA-213ENST00000473598 E9PI62 339 aa13.05□□□□□ -0.32
LMNA-213ENST00000473598 CASKO14936 926 aa13.05□□□□□ -0.32
LMNA-213ENST00000473598 PLPP2O43688 288 aa13.05□□□□□ -0.32
LMNA-213ENST00000473598 SSNA1O43805 119 aa13.05□□□□□ -0.32
LMNA-213ENST00000473598 ZNF432O94892 652 aa13.05□□□□□ -0.32
LMNA-213ENST00000473598 SPP1P10451 314 aa13.05□□□□□ -0.32
LMNA-213ENST00000473598 PPP3CBP16298 524 aa13.05□□□□□ -0.32
LMNA-213ENST00000473598 CD53P19397 219 aa13.05□□□□□ -0.32
LMNA-213ENST00000473598 ZP1P60852 638 aa13.05□□□□□ -0.32
LMNA-213ENST00000473598 GLO1Q04760 184 aa13.05□□□□□ -0.32
LMNA-213ENST00000473598 HLXQ14774 488 aaPredicted RBP13.05□□□□□ -0.32
LMNA-213ENST00000473598 TMEM123Q8N131 208 aa13.05□□□□□ -0.32
LMNA-213ENST00000473598 ABHD3Q8WU67 409 aa13.05□□□□□ -0.32
LMNA-213ENST00000473598 ACOT12Q8WYK0 555 aa13.05□□□□□ -0.32
LMNA-213ENST00000473598 C4orf36Q96KX1 117 aa13.05□□□□□ -0.32
LMNA-213ENST00000473598 PRDM14Q9GZV8 571 aa13.05□□□□□ -0.32
LMNA-213ENST00000473598 SLC25A32Q9H2D1 315 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms