RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 OR5AR1Q8NGP9 310 aa2.71□□□□□ -1.98
CLK1-209ENST00000472679 OR1P1Q8NH06 330 aa2.71□□□□□ -1.98
CLK1-209ENST00000472679 RPEQ96AT9 228 aa2.71□□□□□ -1.98
CLK1-209ENST00000472679 ZFP3Q96NJ6 502 aa2.71□□□□□ -1.98
CLK1-209ENST00000472679 GSDMAQ96QA5 445 aa2.71□□□□□ -1.98
CLK1-209ENST00000472679 CHCHD7Q9BUK0 85 aa2.71□□□□□ -1.98
CLK1-209ENST00000472679 RGS18Q9NS28 235 aa2.71□□□□□ -1.98
CLK1-209ENST00000472679 SEC16AO15027 2179 aa2.7□□□□□ -1.98
CLK1-209ENST00000472679 A0A075B6Q4 140 aa2.7□□□□□ -1.98
CLK1-209ENST00000472679 KBTBD11-OT1A0A1B0GTJ5 212 aa2.7□□□□□ -1.98
CLK1-209ENST00000472679 TSPAN11A1L157 253 aa2.7□□□□□ -1.98
CLK1-209ENST00000472679 GABRG2P18507 467 aa2.7□□□□□ -1.98
CLK1-209ENST00000472679 PFN2P35080 140 aa2.7□□□□□ -1.98
CLK1-209ENST00000472679 FABP6P51161 128 aa2.7□□□□□ -1.98
CLK1-209ENST00000472679 CMC4P56277 68 aaPredicted RBP2.7□□□□□ -1.98
CLK1-209ENST00000472679 RBX1P62877 108 aa2.7□□□□□ -1.98
CLK1-209ENST00000472679 TRMT5Q32P41 509 aaKnown RBP2.7□□□□□ -1.98
CLK1-209ENST00000472679 ZNF829Q3KNS6 432 aaPredicted RBP2.7□□□□□ -1.98
CLK1-209ENST00000472679 SLC25A35Q3KQZ1 300 aa2.7□□□□□ -1.98
CLK1-209ENST00000472679 TWF2Q6IBS0 349 aaKnown RBP2.7□□□□□ -1.98
CLK1-209ENST00000472679 PQLC3Q8N755 202 aa2.7□□□□□ -1.98
CLK1-209ENST00000472679 CCDC148Q8NFR7 591 aa2.7□□□□□ -1.98
CLK1-209ENST00000472679 OR10W1Q8NGF6 305 aa2.7□□□□□ -1.98
CLK1-209ENST00000472679 SGTBQ96EQ0 304 aa2.7□□□□□ -1.98
CLK1-209ENST00000472679 KCNS1Q96KK3 526 aa2.7□□□□□ -1.98
CLK1-209ENST00000472679 RHOXF2Q9BQY4 288 aa2.7□□□□□ -1.98
CLK1-209ENST00000472679 LHX5Q9H2C1 402 aa2.7□□□□□ -1.98
CLK1-209ENST00000472679 CLN8Q9UBY8 286 aa2.7□□□□□ -1.98
CLK1-209ENST00000472679 A0A1B0GUH1 482 aa2.69□□□□□ -1.98
CLK1-209ENST00000472679 TAAR5O14804 337 aa2.69□□□□□ -1.98
CLK1-209ENST00000472679 TCP1P17987 556 aaKnown RBP2.69□□□□□ -1.98
CLK1-209ENST00000472679 HMOX2P30519 316 aa2.69□□□□□ -1.98
CLK1-209ENST00000472679 SLC1A2P43004 574 aa2.69□□□□□ -1.98
CLK1-209ENST00000472679 ITIH4Q14624 930 aa2.69□□□□□ -1.98
CLK1-209ENST00000472679 SPINT4Q6UDR6 99 aa2.69□□□□□ -1.98
CLK1-209ENST00000472679 RTL4Q6ZR62 310 aa2.69□□□□□ -1.98
CLK1-209ENST00000472679 BZW1Q7L1Q6 419 aaKnown RBP2.69□□□□□ -1.98
CLK1-209ENST00000472679 EIF3MQ7L2H7 374 aaKnown RBP2.69□□□□□ -1.98
CLK1-209ENST00000472679 C19orf18Q8NEA5 215 aa2.69□□□□□ -1.98
CLK1-209ENST00000472679 OR5M1Q8NGP8 315 aa2.69□□□□□ -1.98
CLK1-209ENST00000472679 KLF14Q8TD94 323 aaPredicted RBP2.69□□□□□ -1.98
CLK1-209ENST00000472679 RXFP4Q8TDU9 374 aa2.69□□□□□ -1.98
CLK1-209ENST00000472679 BPIFA3Q9BQP9 254 aa2.69□□□□□ -1.98
CLK1-209ENST00000472679 CCNB1IP1Q9NPC3 277 aa2.69□□□□□ -1.98
CLK1-209ENST00000472679 DCAF16Q9NXF7 216 aa2.69□□□□□ -1.98
CLK1-209ENST00000472679 FARSAQ9Y285 508 aaKnown RBP2.69□□□□□ -1.98
CLK1-209ENST00000472679 SIGLEC7Q9Y286 467 aa2.69□□□□□ -1.98
CLK1-209ENST00000472679 KCNE1BA0A087WTH5 132 aa2.68□□□□□ -1.98
CLK1-209ENST00000472679 TRIM64CA6NLI5 447 aa2.68□□□□□ -1.98
CLK1-209ENST00000472679 FGFR1OPO95684 399 aaKnown RBP2.68□□□□□ -1.98
CLK1-209ENST00000472679 TGM6O95932 706 aa2.68□□□□□ -1.98
CLK1-209ENST00000472679 LHBP01229 141 aa2.68□□□□□ -1.98
CLK1-209ENST00000472679 MT-ND4P03905 459 aa2.68□□□□□ -1.98
CLK1-209ENST00000472679 COL8A2P25067 703 aa2.68□□□□□ -1.98
CLK1-209ENST00000472679 PSMB5P28074 263 aa2.68□□□□□ -1.98
CLK1-209ENST00000472679 HTR1DP28221 377 aa2.68□□□□□ -1.98
CLK1-209ENST00000472679 GGT2P36268 569 aa2.68□□□□□ -1.98
CLK1-209ENST00000472679 MYCNOSP40205 109 aa2.68□□□□□ -1.98
CLK1-209ENST00000472679 RPS15AP62244 130 aaKnown RBP2.68□□□□□ -1.98
CLK1-209ENST00000472679 CUL2Q13617 745 aa2.68□□□□□ -1.98
CLK1-209ENST00000472679 TMEM53Q6P2H8 277 aa2.68□□□□□ -1.98
CLK1-209ENST00000472679 MDP1Q86V88 176 aa2.68□□□□□ -1.98
CLK1-209ENST00000472679 JAGN1Q8N5M9 183 aa2.68□□□□□ -1.98
CLK1-209ENST00000472679 NUDT9Q9BW91 350 aa2.68□□□□□ -1.98
CLK1-209ENST00000472679 C20orf96Q9NUD7 363 aaPredicted RBP2.68□□□□□ -1.98
CLK1-209ENST00000472679 RAB20Q9NX57 234 aa2.68□□□□□ -1.98
CLK1-209ENST00000472679 NSD2O96028 1365 aa2.67□□□□□ -1.98
CLK1-209ENST00000472679 CEACAM18A8MTB9 384 aa2.67□□□□□ -1.98
CLK1-209ENST00000472679 CHMP2AO43633 222 aa2.67□□□□□ -1.98
CLK1-209ENST00000472679 RAD1O60671 282 aa2.67□□□□□ -1.98
CLK1-209ENST00000472679 GLAP06280 429 aa2.67□□□□□ -1.98
CLK1-209ENST00000472679 NTF3P20783 257 aa2.67□□□□□ -1.98
CLK1-209ENST00000472679 CD34P28906 385 aa2.67□□□□□ -1.98
CLK1-209ENST00000472679 TNFSF9P41273 254 aa2.67□□□□□ -1.98
CLK1-209ENST00000472679 PPICP45877 212 aa2.67□□□□□ -1.98
CLK1-209ENST00000472679 UBE2E1P51965 193 aa2.67□□□□□ -1.98
CLK1-209ENST00000472679 CASP12Q6UXS9 341 aa2.67□□□□□ -1.98
CLK1-209ENST00000472679 STK40Q8N2I9 435 aa2.67□□□□□ -1.98
CLK1-209ENST00000472679 OR4K3Q96R72 315 aa2.67□□□□□ -1.98
CLK1-209ENST00000472679 MARVELD1Q9BSK0 173 aa2.67□□□□□ -1.98
CLK1-209ENST00000472679 ANGPTL4Q9BY76 406 aa2.67□□□□□ -1.98
CLK1-209ENST00000472679 FRMD8P1Q9BZ68 369 aaPredicted RBP2.67□□□□□ -1.98
CLK1-209ENST00000472679 ZNF229Q9UJW7 825 aa2.67□□□□□ -1.98
CLK1-209ENST00000472679 TICRRQ7Z2Z1 1910 aa2.67□□□□□ -1.98
CLK1-209ENST00000472679 NID2Q14112 1375 aa2.66□□□□□ -1.98
CLK1-209ENST00000472679 ANKRD65E5RJM6 399 aa2.66□□□□□ -1.98
CLK1-209ENST00000472679 BCKDKO14874 412 aa2.66□□□□□ -1.98
CLK1-209ENST00000472679 FCN3O75636 299 aa2.66□□□□□ -1.98
CLK1-209ENST00000472679 HLA-HP01893 362 aa2.66□□□□□ -1.98
CLK1-209ENST00000472679 RPN2P04844 631 aa2.66□□□□□ -1.98
CLK1-209ENST00000472679 IFNW1P05000 195 aa2.66□□□□□ -1.98
CLK1-209ENST00000472679 GSTM3P21266 225 aa2.66□□□□□ -1.98
CLK1-209ENST00000472679 RAB9AP51151 201 aa2.66□□□□□ -1.98
CLK1-209ENST00000472679 ELF3P78545 371 aaPredicted RBP2.66□□□□□ -1.98
CLK1-209ENST00000472679 FAM53BQ14153 422 aa2.66□□□□□ -1.98
CLK1-209ENST00000472679 KLHL12Q53G59 568 aa2.66□□□□□ -1.98
CLK1-209ENST00000472679 OPN5Q6U736 354 aa2.66□□□□□ -1.98
CLK1-209ENST00000472679 CD300LGQ6UXG3 332 aa2.66□□□□□ -1.98
CLK1-209ENST00000472679 SSX9Q7RTT3 188 aa2.66□□□□□ -1.98
CLK1-209ENST00000472679 BPIFCQ8NFQ6 507 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms