RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 IMPA2O14732 288 aa5.58□□□□□ -1.52
HDAC1-204ENST00000471488 GMDSO60547 372 aa5.58□□□□□ -1.52
HDAC1-204ENST00000471488 KHDRBS3O75525 346 aaKnown RBP5.58□□□□□ -1.52
HDAC1-204ENST00000471488 HLA-DQA2P01906 255 aa5.58□□□□□ -1.52
HDAC1-204ENST00000471488 IFNW1P05000 195 aa5.58□□□□□ -1.52
HDAC1-204ENST00000471488 NHLRC4P0CG21 123 aaPredicted RBP5.58□□□□□ -1.52
HDAC1-204ENST00000471488 PAICSP22234 425 aaKnown RBP5.58□□□□□ -1.52
HDAC1-204ENST00000471488 GRK5P34947 590 aa5.58□□□□□ -1.52
HDAC1-204ENST00000471488 RBM34P42696 430 aaKnown RBP5.58□□□□□ -1.52
HDAC1-204ENST00000471488 GABRA2P47869 451 aa5.58□□□□□ -1.52
HDAC1-204ENST00000471488 CBX1P83916 185 aa5.58□□□□□ -1.52
HDAC1-204ENST00000471488 DCTN2Q13561 401 aaKnown RBP5.58□□□□□ -1.52
HDAC1-204ENST00000471488 SELPLGQ14242 412 aa5.58□□□□□ -1.52
HDAC1-204ENST00000471488 CNN3Q15417 329 aaKnown RBP5.58□□□□□ -1.52
HDAC1-204ENST00000471488 AGKQ53H12 422 aa5.58□□□□□ -1.52
HDAC1-204ENST00000471488 CASC10Q5T4H9 136 aa5.58□□□□□ -1.52
HDAC1-204ENST00000471488 ZFAND6Q6FIF0 208 aa5.58□□□□□ -1.52
HDAC1-204ENST00000471488 METAP1DQ6UB28 335 aaPredicted RBP5.58□□□□□ -1.52
HDAC1-204ENST00000471488 UNQ9370/PRO34162Q6UXP9 181 aa5.58□□□□□ -1.52
HDAC1-204ENST00000471488 COLCA1Q6ZS62 124 aa5.58□□□□□ -1.52
HDAC1-204ENST00000471488 FOXL2NBQ6ZUU3 175 aa5.58□□□□□ -1.52
HDAC1-204ENST00000471488 DPY19L4Q7Z388 723 aa5.58□□□□□ -1.52
HDAC1-204ENST00000471488 PATL1Q86TB9 770 aaKnown RBP5.58□□□□□ -1.52
HDAC1-204ENST00000471488 GJC3Q8NFK1 279 aa5.58□□□□□ -1.52
HDAC1-204ENST00000471488 OR2AJ1Q8NGZ0 328 aa5.58□□□□□ -1.52
HDAC1-204ENST00000471488 MUC7Q8TAX7 377 aa5.58□□□□□ -1.52
HDAC1-204ENST00000471488 TAMM41Q96BW9 452 aa5.58□□□□□ -1.52
HDAC1-204ENST00000471488 DUS3LQ96G46 650 aaKnown RBP5.58□□□□□ -1.52
HDAC1-204ENST00000471488 TPD52L3Q96J77 140 aa5.58□□□□□ -1.52
HDAC1-204ENST00000471488 WACQ9BTA9 647 aa5.58□□□□□ -1.52
HDAC1-204ENST00000471488 ZNF426Q9BUY5 554 aa5.58□□□□□ -1.52
HDAC1-204ENST00000471488 HDHD2Q9H0R4 259 aa5.58□□□□□ -1.52
HDAC1-204ENST00000471488 SYT4Q9H2B2 425 aa5.58□□□□□ -1.52
HDAC1-204ENST00000471488 MUC13Q9H3R2 512 aa5.58□□□□□ -1.52
HDAC1-204ENST00000471488 METTL8Q9H825 291 aaKnown RBP5.58□□□□□ -1.52
HDAC1-204ENST00000471488 C14orf119Q9NWQ9 140 aa5.58□□□□□ -1.52
HDAC1-204ENST00000471488 SLC25A10Q9UBX3 287 aaPredicted RBP5.58□□□□□ -1.52
HDAC1-204ENST00000471488 PRPF19Q9UMS4 504 aaKnown RBP5.58□□□□□ -1.52
HDAC1-204ENST00000471488 PRSS37A4D1T9 235 aa5.57□□□□□ -1.52
HDAC1-204ENST00000471488 NPIPB13A6NJU9 1138 aa5.57□□□□□ -1.52
HDAC1-204ENST00000471488 CD300LBA8K4G0 201 aa5.57□□□□□ -1.52
HDAC1-204ENST00000471488 NPIPB4C9JG80 1138 aa5.57□□□□□ -1.52
HDAC1-204ENST00000471488 J3QW42 95 aa5.57□□□□□ -1.52
HDAC1-204ENST00000471488 POLR3GO15318 223 aaPredicted RBP5.57□□□□□ -1.52
HDAC1-204ENST00000471488 TBX1O43435 398 aa5.57□□□□□ -1.52
HDAC1-204ENST00000471488 SYNGR1O43759 233 aa5.57□□□□□ -1.52
HDAC1-204ENST00000471488 GLCEO94923 617 aa5.57□□□□□ -1.52
HDAC1-204ENST00000471488 OR5F1O95221 314 aa5.57□□□□□ -1.52
HDAC1-204ENST00000471488 DUS4LO95620 317 aaKnown RBP5.57□□□□□ -1.52
HDAC1-204ENST00000471488 LYL1P12980 280 aa5.57□□□□□ -1.52
HDAC1-204ENST00000471488 HOXB9P17482 250 aaPredicted RBP5.57□□□□□ -1.52
HDAC1-204ENST00000471488 GPX2P18283 190 aa5.57□□□□□ -1.52
HDAC1-204ENST00000471488 IFNA8P32881 189 aa5.57□□□□□ -1.52
HDAC1-204ENST00000471488 GPR4P46093 362 aa5.57□□□□□ -1.52
HDAC1-204ENST00000471488 TPTEP56180 551 aa5.57□□□□□ -1.52
HDAC1-204ENST00000471488 CSNK2BP67870 215 aa5.57□□□□□ -1.52
HDAC1-204ENST00000471488 MZT1Q08AG7 82 aa5.57□□□□□ -1.52
HDAC1-204ENST00000471488 KRR1Q13601 381 aaKnown RBP5.57□□□□□ -1.52
HDAC1-204ENST00000471488 GFOD2Q3B7J2 385 aa5.57□□□□□ -1.52
HDAC1-204ENST00000471488 MESTQ5EB52 335 aa5.57□□□□□ -1.52
HDAC1-204ENST00000471488 RABL3Q5HYI8 236 aa5.57□□□□□ -1.52
HDAC1-204ENST00000471488 LRIF1Q5T3J3 769 aa5.57□□□□□ -1.52
HDAC1-204ENST00000471488 ZNF730Q6ZMV8 503 aa5.57□□□□□ -1.52
HDAC1-204ENST00000471488 KCTD8Q6ZWB6 473 aa5.57□□□□□ -1.52
HDAC1-204ENST00000471488 DHDDSQ86SQ9 333 aa5.57□□□□□ -1.52
HDAC1-204ENST00000471488 NRMQ8IXM6 262 aa5.57□□□□□ -1.52
HDAC1-204ENST00000471488 LY6G5BQ8NDX9 201 aa5.57□□□□□ -1.52
HDAC1-204ENST00000471488 WFDC9Q8NEX5 89 aa5.57□□□□□ -1.52
HDAC1-204ENST00000471488 TMEM185AQ8NFB2 350 aa5.57□□□□□ -1.52
HDAC1-204ENST00000471488 OR10A6Q8NH74 314 aa5.57□□□□□ -1.52
HDAC1-204ENST00000471488 TSSK2Q96PF2 358 aa5.57□□□□□ -1.52
HDAC1-204ENST00000471488 COQ7Q99807 217 aa5.57□□□□□ -1.52
HDAC1-204ENST00000471488 ATF6BQ99941 703 aa5.57□□□□□ -1.52
HDAC1-204ENST00000471488 ROPN1BQ9BZX4 212 aaPredicted RBP5.57□□□□□ -1.52
HDAC1-204ENST00000471488 NDEL1Q9GZM8 345 aa5.57□□□□□ -1.52
HDAC1-204ENST00000471488 SLC22A4Q9H015 551 aa5.57□□□□□ -1.52
HDAC1-204ENST00000471488 NUAK2Q9H093 628 aa5.57□□□□□ -1.52
HDAC1-204ENST00000471488 ROPN1Q9HAT0 212 aaPredicted RBP5.57□□□□□ -1.52
HDAC1-204ENST00000471488 SRA1Q9HD15 236 aaKnown RBP5.57□□□□□ -1.52
HDAC1-204ENST00000471488 THAP1Q9NVV9 213 aa5.57□□□□□ -1.52
HDAC1-204ENST00000471488 HAO1Q9UJM8 370 aa5.57□□□□□ -1.52
HDAC1-204ENST00000471488 NDUFAF1Q9Y375 327 aa5.57□□□□□ -1.52
HDAC1-204ENST00000471488 TENM2Q9NT68 2774 aa5.57□□□□□ -1.52
HDAC1-204ENST00000471488 RYR2Q92736 4967 aa5.56□□□□□ -1.52
HDAC1-204ENST00000471488 ANKRD30BLA7E2S9 258 aa5.56□□□□□ -1.52
HDAC1-204ENST00000471488 NUDT19A8MXV4 375 aa5.56□□□□□ -1.52
HDAC1-204ENST00000471488 F2RL2O00254 374 aa5.56□□□□□ -1.52
HDAC1-204ENST00000471488 CDIPTO14735 213 aa5.56□□□□□ -1.52
HDAC1-204ENST00000471488 ALDOBP05062 364 aa5.56□□□□□ -1.52
HDAC1-204ENST00000471488 ACSM4P0C7M7 580 aa5.56□□□□□ -1.52
HDAC1-204ENST00000471488 TROVE2P10155 538 aaKnown RBP eCLIP5.56□□□□□ -1.52
HDAC1-204ENST00000471488 SLC2A1P11166 492 aa5.56□□□□□ -1.52
HDAC1-204ENST00000471488 MUC1P15941 1255 aaPredicted RBP5.56□□□□□ -1.52
HDAC1-204ENST00000471488 SDHAP31040 664 aa5.56□□□□□ -1.52
HDAC1-204ENST00000471488 GNALP38405 381 aa5.56□□□□□ -1.52
HDAC1-204ENST00000471488 NAA10P41227 235 aaPredicted RBP5.56□□□□□ -1.52
HDAC1-204ENST00000471488 SLC7A2P52569 658 aa5.56□□□□□ -1.52
HDAC1-204ENST00000471488 SLC18A1P54219 525 aa5.56□□□□□ -1.52
HDAC1-204ENST00000471488 LSM6P62312 80 aaKnown RBP5.56□□□□□ -1.52
HDAC1-204ENST00000471488 BLCAPP62952 87 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms